EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000021177 (Gene tree)
Gene ID: -
Gene Symbol: prpf4
Alias: mg:ab03a02|zgc:65943
Full Name: PRP4 pre-mRNA processing factor 4 homolog (yeast)
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 5626 bases
Position: chrKV751375.1:2643943-2649568
Accession: ZDB-GENE-030131-5143
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000028030	PRP4	PF08799.11	1.5e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000028506	-	1521	-	ENSMMOP00000028030	506 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000021177's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000021177's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000021177	prpf4	59	31.008	ENSMMOG00000019419	wdr3	51	31.008
ENSMMOG00000021177	prpf4	59	30.038	ENSMMOG00000021007	-	91	30.038
ENSMMOG00000021177	prpf4	58	34.091	ENSMMOG00000007551	tbl3	74	34.091

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000021177	prpf4	99	74.851	ENSG00000136875	PRPF4	97	74.851	Homo_sapiens
ENSMMOG00000021177	prpf4	99	90.269	ENSAPOG00000014132	prpf4	99	90.269	Acanthochromis_polyacanthus
ENSMMOG00000021177	prpf4	99	74.851	ENSAMEG00000013048	PRPF4	95	74.851	Ailuropoda_melanoleuca
ENSMMOG00000021177	prpf4	100	90.784	ENSACIG00000005579	prpf4	100	90.784	Amphilophus_citrinellus
ENSMMOG00000021177	prpf4	100	90.588	ENSAOCG00000005457	prpf4	100	90.588	Amphiprion_ocellaris
ENSMMOG00000021177	prpf4	100	90.392	ENSAPEG00000000776	prpf4	100	90.392	Amphiprion_percula
ENSMMOG00000021177	prpf4	100	91.569	ENSATEG00000023013	prpf4	100	91.569	Anabas_testudineus
ENSMMOG00000021177	prpf4	99	75.446	ENSAPLG00000006534	PRPF4	94	75.446	Anas_platyrhynchos
ENSMMOG00000021177	prpf4	99	74.853	ENSACAG00000015110	PRPF4	98	74.853	Anolis_carolinensis
ENSMMOG00000021177	prpf4	99	74.851	ENSANAG00000022464	PRPF4	93	74.851	Aotus_nancymaae
ENSMMOG00000021177	prpf4	100	90.980	ENSACLG00000019031	prpf4	100	90.980	Astatotilapia_calliptera
ENSMMOG00000021177	prpf4	99	62.572	ENSAMXG00000006756	prpf4	99	73.465	Astyanax_mexicanus
ENSMMOG00000021177	prpf4	99	74.851	ENSBTAG00000004571	PRPF4	97	74.851	Bos_taurus
ENSMMOG00000021177	prpf4	93	44.000	WBGene00007972	prp-4	85	45.606	Caenorhabditis_elegans
ENSMMOG00000021177	prpf4	99	74.851	ENSCJAG00000017856	PRPF4	97	74.851	Callithrix_jacchus
ENSMMOG00000021177	prpf4	99	74.851	ENSCAFG00000003224	PRPF4	94	74.851	Canis_familiaris
ENSMMOG00000021177	prpf4	99	74.851	ENSCAFG00020022637	PRPF4	97	74.851	Canis_lupus_dingo
ENSMMOG00000021177	prpf4	99	74.653	ENSCHIG00000024648	-	97	74.653	Capra_hircus
ENSMMOG00000021177	prpf4	99	74.653	ENSTSYG00000010366	PRPF4	97	74.653	Carlito_syrichta
ENSMMOG00000021177	prpf4	91	67.064	ENSCAPG00000008935	PRPF4	97	67.064	Cavia_aperea
ENSMMOG00000021177	prpf4	99	69.307	ENSCPOG00000014729	-	97	69.307	Cavia_porcellus
ENSMMOG00000021177	prpf4	99	74.257	ENSCPOG00000010747	-	97	74.257	Cavia_porcellus
ENSMMOG00000021177	prpf4	99	74.653	ENSCCAG00000028990	PRPF4	97	74.653	Cebus_capucinus
ENSMMOG00000021177	prpf4	99	74.851	ENSCATG00000021552	PRPF4	97	74.556	Cercocebus_atys
ENSMMOG00000021177	prpf4	99	74.653	ENSCLAG00000013448	PRPF4	97	74.653	Chinchilla_lanigera
ENSMMOG00000021177	prpf4	89	74.336	ENSCHOG00000007233	PRPF4	100	74.336	Choloepus_hoffmanni
ENSMMOG00000021177	prpf4	100	75.197	ENSCPBG00000019136	PRPF4	73	75.197	Chrysemys_picta_bellii
ENSMMOG00000021177	prpf4	97	59.798	ENSCING00000001299	-	95	59.798	Ciona_intestinalis
ENSMMOG00000021177	prpf4	99	57.760	ENSCSAVG00000009178	-	99	58.621	Ciona_savignyi
ENSMMOG00000021177	prpf4	99	74.851	ENSCANG00000003246	PRPF4	97	74.851	Colobus_angolensis_palliatus
ENSMMOG00000021177	prpf4	99	75.050	ENSCGRG00001016992	Prpf4	97	75.050	Cricetulus_griseus_chok1gshd
ENSMMOG00000021177	prpf4	99	75.050	ENSCGRG00000017560	Prpf4	97	75.050	Cricetulus_griseus_crigri
ENSMMOG00000021177	prpf4	100	88.142	ENSCSEG00000020451	prpf4	100	88.142	Cynoglossus_semilaevis
ENSMMOG00000021177	prpf4	99	80.000	ENSDARG00000067639	prpf4	99	80.000	Danio_rerio
ENSMMOG00000021177	prpf4	99	74.653	ENSDNOG00000013203	PRPF4	97	74.653	Dasypus_novemcinctus
ENSMMOG00000021177	prpf4	99	75.248	ENSDORG00000026275	Prpf4	97	75.248	Dipodomys_ordii
ENSMMOG00000021177	prpf4	99	49.365	FBgn0036733	U4-U6-60K	99	49.728	Drosophila_melanogaster
ENSMMOG00000021177	prpf4	99	75.248	ENSETEG00000020389	PRPF4	97	75.248	Echinops_telfairi
ENSMMOG00000021177	prpf4	99	67.574	ENSEBUG00000015229	prpf4	88	68.027	Eptatretus_burgeri
ENSMMOG00000021177	prpf4	99	74.851	ENSEASG00005022678	PRPF4	97	74.851	Equus_asinus_asinus
ENSMMOG00000021177	prpf4	99	74.851	ENSECAG00000007072	PRPF4	97	74.851	Equus_caballus
ENSMMOG00000021177	prpf4	99	59.864	ENSEEUG00000007480	PRPF4	96	59.864	Erinaceus_europaeus
ENSMMOG00000021177	prpf4	99	81.349	ENSELUG00000007510	prpf4	99	81.349	Esox_lucius
ENSMMOG00000021177	prpf4	99	74.851	ENSFCAG00000005514	PRPF4	97	74.851	Felis_catus
ENSMMOG00000021177	prpf4	99	73.923	ENSFALG00000005423	PRPF4	85	73.923	Ficedula_albicollis
ENSMMOG00000021177	prpf4	99	74.653	ENSFDAG00000005839	PRPF4	97	74.653	Fukomys_damarensis
ENSMMOG00000021177	prpf4	100	89.020	ENSFHEG00000001300	prpf4	100	89.020	Fundulus_heteroclitus
ENSMMOG00000021177	prpf4	99	75.248	ENSGALG00000008857	PRPF4	94	75.248	Gallus_gallus
ENSMMOG00000021177	prpf4	94	85.410	ENSGAFG00000012164	prpf4	69	85.410	Gambusia_affinis
ENSMMOG00000021177	prpf4	100	80.906	ENSGACG00000015476	prpf4	100	80.709	Gasterosteus_aculeatus
ENSMMOG00000021177	prpf4	100	75.197	ENSGAGG00000025029	PRPF4	94	75.197	Gopherus_agassizii
ENSMMOG00000021177	prpf4	99	74.851	ENSGGOG00000006943	PRPF4	97	74.851	Gorilla_gorilla
ENSMMOG00000021177	prpf4	100	91.176	ENSHBUG00000000562	prpf4	100	91.176	Haplochromis_burtoni
ENSMMOG00000021177	prpf4	99	60.792	ENSHGLG00000003838	-	97	60.000	Heterocephalus_glaber_female
ENSMMOG00000021177	prpf4	99	74.851	ENSHGLG00000015191	PRPF4	97	74.851	Heterocephalus_glaber_female
ENSMMOG00000021177	prpf4	95	63.655	ENSHGLG00000016628	-	95	64.066	Heterocephalus_glaber_female
ENSMMOG00000021177	prpf4	99	60.792	ENSHGLG00100005571	-	97	60.000	Heterocephalus_glaber_male
ENSMMOG00000021177	prpf4	99	79.406	ENSIPUG00000017956	PRPF4	99	79.406	Ictalurus_punctatus
ENSMMOG00000021177	prpf4	99	75.248	ENSSTOG00000027833	PRPF4	97	75.248	Ictidomys_tridecemlineatus
ENSMMOG00000021177	prpf4	99	74.653	ENSJJAG00000008838	Prpf4	97	74.653	Jaculus_jaculus
ENSMMOG00000021177	prpf4	100	88.824	ENSKMAG00000013236	prpf4	100	88.824	Kryptolebias_marmoratus
ENSMMOG00000021177	prpf4	100	92.126	ENSLBEG00000020611	prpf4	100	92.126	Labrus_bergylta
ENSMMOG00000021177	prpf4	100	70.980	ENSLACG00000016317	PRPF4	97	70.980	Latimeria_chalumnae
ENSMMOG00000021177	prpf4	100	81.102	ENSLOCG00000000581	prpf4	100	81.102	Lepisosteus_oculatus
ENSMMOG00000021177	prpf4	99	74.851	ENSLAFG00000018225	PRPF4	97	74.851	Loxodonta_africana
ENSMMOG00000021177	prpf4	99	74.653	ENSMFAG00000039397	PRPF4	97	74.653	Macaca_fascicularis
ENSMMOG00000021177	prpf4	99	74.851	ENSMMUG00000005844	PRPF4	97	74.556	Macaca_mulatta
ENSMMOG00000021177	prpf4	99	66.139	ENSMNEG00000033737	PRPF4	97	65.878	Macaca_nemestrina
ENSMMOG00000021177	prpf4	99	74.851	ENSMLEG00000040284	PRPF4	97	74.556	Mandrillus_leucophaeus
ENSMMOG00000021177	prpf4	100	90.588	ENSMAMG00000020141	prpf4	100	90.588	Mastacembelus_armatus
ENSMMOG00000021177	prpf4	100	90.980	ENSMZEG00005023205	prpf4	100	90.980	Maylandia_zebra
ENSMMOG00000021177	prpf4	99	74.653	ENSMGAG00000001796	PRPF4	94	74.653	Meleagris_gallopavo
ENSMMOG00000021177	prpf4	99	75.050	ENSMAUG00000018022	Prpf4	97	75.050	Mesocricetus_auratus
ENSMMOG00000021177	prpf4	99	74.951	ENSMICG00000015022	PRPF4	97	74.951	Microcebus_murinus
ENSMMOG00000021177	prpf4	99	75.050	ENSMOCG00000018273	Prpf4	97	75.050	Microtus_ochrogaster
ENSMMOG00000021177	prpf4	99	73.964	ENSMODG00000004444	-	97	74.257	Monodelphis_domestica
ENSMMOG00000021177	prpf4	99	73.373	ENSMODG00000025096	-	94	73.373	Monodelphis_domestica
ENSMMOG00000021177	prpf4	100	91.961	ENSMALG00000013624	prpf4	100	91.961	Monopterus_albus
ENSMMOG00000021177	prpf4	99	75.050	MGP_CAROLIEiJ_G0026078	Prpf4	97	75.050	Mus_caroli
ENSMMOG00000021177	prpf4	99	75.050	ENSMUSG00000066148	Prpf4	97	75.050	Mus_musculus
ENSMMOG00000021177	prpf4	99	75.248	MGP_PahariEiJ_G0028413	Prpf4	97	75.248	Mus_pahari
ENSMMOG00000021177	prpf4	99	75.050	MGP_SPRETEiJ_G0027042	Prpf4	97	75.050	Mus_spretus
ENSMMOG00000021177	prpf4	99	74.851	ENSMPUG00000007883	PRPF4	97	74.851	Mustela_putorius_furo
ENSMMOG00000021177	prpf4	99	74.653	ENSMLUG00000015309	-	94	74.653	Myotis_lucifugus
ENSMMOG00000021177	prpf4	99	73.663	ENSMLUG00000008626	-	94	73.663	Myotis_lucifugus
ENSMMOG00000021177	prpf4	99	69.901	ENSNGAG00000000468	Prpf4	97	69.901	Nannospalax_galili
ENSMMOG00000021177	prpf4	100	90.980	ENSNBRG00000007972	prpf4	100	90.980	Neolamprologus_brichardi
ENSMMOG00000021177	prpf4	99	74.851	ENSNLEG00000016647	PRPF4	97	74.851	Nomascus_leucogenys
ENSMMOG00000021177	prpf4	99	73.767	ENSMEUG00000013256	PRPF4	99	73.767	Notamacropus_eugenii
ENSMMOG00000021177	prpf4	99	75.050	ENSOPRG00000005302	PRPF4	97	75.050	Ochotona_princeps
ENSMMOG00000021177	prpf4	99	74.653	ENSODEG00000018147	PRPF4	97	74.653	Octodon_degus
ENSMMOG00000021177	prpf4	100	90.784	ENSONIG00000012671	prpf4	100	90.784	Oreochromis_niloticus
ENSMMOG00000021177	prpf4	99	75.050	ENSOCUG00000005046	PRPF4	97	75.050	Oryctolagus_cuniculus
ENSMMOG00000021177	prpf4	100	89.328	ENSORLG00000019641	prpf4	100	89.328	Oryzias_latipes
ENSMMOG00000021177	prpf4	100	89.328	ENSORLG00020019438	prpf4	100	89.328	Oryzias_latipes_hni
ENSMMOG00000021177	prpf4	100	88.340	ENSOMEG00000020941	prpf4	100	88.727	Oryzias_melastigma
ENSMMOG00000021177	prpf4	99	71.089	ENSOGAG00000007802	PRPF4	95	71.089	Otolemur_garnettii
ENSMMOG00000021177	prpf4	99	74.653	ENSOARG00000006319	PRPF4	94	74.653	Ovis_aries
ENSMMOG00000021177	prpf4	99	74.851	ENSPPAG00000041797	PRPF4	97	74.851	Pan_paniscus
ENSMMOG00000021177	prpf4	99	74.851	ENSPPRG00000014360	PRPF4	97	74.851	Panthera_pardus
ENSMMOG00000021177	prpf4	99	74.851	ENSPTIG00000009574	PRPF4	97	74.851	Panthera_tigris_altaica
ENSMMOG00000021177	prpf4	99	74.851	ENSPTRG00000021274	PRPF4	97	74.851	Pan_troglodytes
ENSMMOG00000021177	prpf4	99	74.653	ENSPANG00000025776	PRPF4	93	74.359	Papio_anubis
ENSMMOG00000021177	prpf4	100	80.276	ENSPKIG00000017259	prpf4	100	80.276	Paramormyrops_kingsleyae
ENSMMOG00000021177	prpf4	100	75.787	ENSPSIG00000010713	PRPF4	89	75.787	Pelodiscus_sinensis
ENSMMOG00000021177	prpf4	100	64.498	ENSPMGG00000000997	prpf4	98	63.941	Periophthalmus_magnuspinnatus
ENSMMOG00000021177	prpf4	99	75.050	ENSPEMG00000024115	Prpf4	97	75.050	Peromyscus_maniculatus_bairdii
ENSMMOG00000021177	prpf4	99	73.964	ENSPCIG00000003821	PRPF4	98	73.964	Phascolarctos_cinereus
ENSMMOG00000021177	prpf4	100	81.907	ENSPFOG00000013524	prpf4	99	85.714	Poecilia_formosa
ENSMMOG00000021177	prpf4	93	84.308	ENSPLAG00000011620	prpf4	97	84.211	Poecilia_latipinna
ENSMMOG00000021177	prpf4	99	85.841	ENSPMEG00000006813	prpf4	100	85.841	Poecilia_mexicana
ENSMMOG00000021177	prpf4	99	74.851	ENSPCAG00000002561	PRPF4	98	74.851	Procavia_capensis
ENSMMOG00000021177	prpf4	99	75.050	ENSPCOG00000011975	PRPF4	97	75.050	Propithecus_coquereli
ENSMMOG00000021177	prpf4	99	71.881	ENSPVAG00000004708	PRPF4	97	71.881	Pteropus_vampyrus
ENSMMOG00000021177	prpf4	100	91.176	ENSPNYG00000008013	prpf4	100	91.176	Pundamilia_nyererei
ENSMMOG00000021177	prpf4	99	80.000	ENSPNAG00000000697	prpf4	99	80.000	Pygocentrus_nattereri
ENSMMOG00000021177	prpf4	99	74.851	ENSRNOG00000014777	Prpf4	97	74.851	Rattus_norvegicus
ENSMMOG00000021177	prpf4	99	74.851	ENSRBIG00000040221	PRPF4	97	74.851	Rhinopithecus_bieti
ENSMMOG00000021177	prpf4	99	74.851	ENSRROG00000040240	PRPF4	97	74.851	Rhinopithecus_roxellana
ENSMMOG00000021177	prpf4	99	73.964	ENSSHAG00000017658	PRPF4	97	73.964	Sarcophilus_harrisii
ENSMMOG00000021177	prpf4	100	80.118	ENSSFOG00015008963	prpf4	100	80.118	Scleropages_formosus
ENSMMOG00000021177	prpf4	100	89.608	ENSSMAG00000008889	prpf4	100	89.608	Scophthalmus_maximus
ENSMMOG00000021177	prpf4	99	90.683	ENSSDUG00000022083	prpf4	94	91.097	Seriola_dumerili
ENSMMOG00000021177	prpf4	99	90.476	ENSSLDG00000008115	prpf4	94	90.890	Seriola_lalandi_dorsalis
ENSMMOG00000021177	prpf4	99	75.937	ENSSPUG00000015582	PRPF4	97	75.937	Sphenodon_punctatus
ENSMMOG00000021177	prpf4	100	84.405	ENSSPAG00000011286	prpf4	100	84.405	Stegastes_partitus
ENSMMOG00000021177	prpf4	99	74.851	ENSSSCG00000024648	PRPF4	97	74.851	Sus_scrofa
ENSMMOG00000021177	prpf4	97	75.862	ENSTGUG00000002623	PRPF4	100	75.869	Taeniopygia_guttata
ENSMMOG00000021177	prpf4	100	90.570	ENSTRUG00000008853	prpf4	100	90.570	Takifugu_rubripes
ENSMMOG00000021177	prpf4	100	91.502	ENSTNIG00000013250	prpf4	100	91.502	Tetraodon_nigroviridis
ENSMMOG00000021177	prpf4	99	67.723	ENSTBEG00000000821	PRPF4	97	67.723	Tupaia_belangeri
ENSMMOG00000021177	prpf4	89	76.174	ENSTTRG00000003246	PRPF4	85	76.174	Tursiops_truncatus
ENSMMOG00000021177	prpf4	70	64.986	ENSUAMG00000018288	PRPF4	96	65.352	Ursus_americanus
ENSMMOG00000021177	prpf4	99	74.257	ENSUMAG00000019375	PRPF4	97	74.257	Ursus_maritimus
ENSMMOG00000021177	prpf4	99	74.455	ENSVPAG00000005281	PRPF4	97	74.455	Vicugna_pacos
ENSMMOG00000021177	prpf4	99	74.455	ENSVVUG00000002476	PRPF4	99	74.455	Vulpes_vulpes
ENSMMOG00000021177	prpf4	71	63.736	ENSXCOG00000006101	prpf4	93	66.748	Xiphophorus_couchianus
ENSMMOG00000021177	prpf4	91	73.978	ENSXMAG00000002750	prpf4	100	76.125	Xiphophorus_maculatus