EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMOG00000021245 (Gene tree)
Gene ID: -
Gene Symbol: cpsf1
Alias: wu:fb24c01
Full Name: cleavage and polyadenylation specific factor 1
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Plus strand
Length: 20797 bases
Position: chrKV751379.1:2685620-2706416
Accession: ZDB-GENE-040709-2
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000028117	CPSF_A	PF03178.15	5.1e-91	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000028593	-	4290	-	ENSMMOP00000028117	1429 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000021245's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000021245's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000021245	cpsf1	100	78.645	ENSG00000071894	CPSF1	100	78.645	Homo_sapiens
ENSMMOG00000021245	cpsf1	100	90.467	ENSAPOG00000019621	cpsf1	100	90.669	Acanthochromis_polyacanthus
ENSMMOG00000021245	cpsf1	96	78.152	ENSAMEG00000005557	CPSF1	99	77.738	Ailuropoda_melanoleuca
ENSMMOG00000021245	cpsf1	100	90.007	ENSACIG00000006112	cpsf1	100	90.423	Amphilophus_citrinellus
ENSMMOG00000021245	cpsf1	100	91.851	ENSAOCG00000007120	cpsf1	100	91.989	Amphiprion_ocellaris
ENSMMOG00000021245	cpsf1	100	92.690	ENSAPEG00000005755	cpsf1	100	92.828	Amphiprion_percula
ENSMMOG00000021245	cpsf1	100	89.602	ENSATEG00000011097	cpsf1	100	90.209	Anabas_testudineus
ENSMMOG00000021245	cpsf1	93	74.629	ENSACAG00000009655	CPSF1	100	74.481	Anolis_carolinensis
ENSMMOG00000021245	cpsf1	100	78.838	ENSANAG00000036514	CPSF1	100	78.976	Aotus_nancymaae
ENSMMOG00000021245	cpsf1	100	89.525	ENSACLG00000012231	cpsf1	100	89.735	Astatotilapia_calliptera
ENSMMOG00000021245	cpsf1	100	80.836	ENSAMXG00000008485	cpsf1	100	80.627	Astyanax_mexicanus
ENSMMOG00000021245	cpsf1	100	77.868	ENSBTAG00000008355	CPSF1	100	78.592	Bos_taurus
ENSMMOG00000021245	cpsf1	100	33.134	WBGene00022301	cpsf-1	99	41.076	Caenorhabditis_elegans
ENSMMOG00000021245	cpsf1	100	79.046	ENSCJAG00000021421	CPSF1	100	78.907	Callithrix_jacchus
ENSMMOG00000021245	cpsf1	96	79.298	ENSCAFG00000001600	CPSF1	100	79.028	Canis_familiaris
ENSMMOG00000021245	cpsf1	100	78.798	ENSCAFG00020020821	CPSF1	100	78.867	Canis_lupus_dingo
ENSMMOG00000021245	cpsf1	100	75.363	ENSCHIG00000015833	CPSF1	100	75.017	Capra_hircus
ENSMMOG00000021245	cpsf1	100	79.322	ENSTSYG00000028560	CPSF1	100	79.253	Carlito_syrichta
ENSMMOG00000021245	cpsf1	96	78.879	ENSCAPG00000014921	CPSF1	99	78.736	Cavia_aperea
ENSMMOG00000021245	cpsf1	100	77.870	ENSCPOG00000011448	CPSF1	100	77.732	Cavia_porcellus
ENSMMOG00000021245	cpsf1	100	79.391	ENSCCAG00000037658	CPSF1	100	78.976	Cebus_capucinus
ENSMMOG00000021245	cpsf1	100	78.769	ENSCATG00000037234	CPSF1	100	78.700	Cercocebus_atys
ENSMMOG00000021245	cpsf1	100	79.308	ENSCLAG00000012166	CPSF1	100	79.100	Chinchilla_lanigera
ENSMMOG00000021245	cpsf1	100	79.184	ENSCSAG00000008502	CPSF1	100	78.907	Chlorocebus_sabaeus
ENSMMOG00000021245	cpsf1	99	80.740	ENSCPBG00000018910	CPSF1	96	80.866	Chrysemys_picta_bellii
ENSMMOG00000021245	cpsf1	96	49.316	ENSCING00000000514	-	100	48.996	Ciona_intestinalis
ENSMMOG00000021245	cpsf1	99	49.413	ENSCSAVG00000002293	-	99	51.628	Ciona_savignyi
ENSMMOG00000021245	cpsf1	98	76.305	ENSCANG00000032760	CPSF1	100	78.704	Colobus_angolensis_palliatus
ENSMMOG00000021245	cpsf1	100	79.170	ENSCGRG00001016344	Cpsf1	100	79.031	Cricetulus_griseus_chok1gshd
ENSMMOG00000021245	cpsf1	100	77.370	ENSCGRG00000003118	Cpsf1	100	77.232	Cricetulus_griseus_crigri
ENSMMOG00000021245	cpsf1	100	88.803	ENSCSEG00000013464	cpsf1	100	88.803	Cynoglossus_semilaevis
ENSMMOG00000021245	cpsf1	85	87.809	ENSCVAG00000014059	cpsf1	100	83.333	Cyprinodon_variegatus
ENSMMOG00000021245	cpsf1	100	86.639	ENSDARG00000034178	cpsf1	100	86.777	Danio_rerio
ENSMMOG00000021245	cpsf1	56	82.370	ENSDNOG00000043654	CPSF1	94	82.081	Dasypus_novemcinctus
ENSMMOG00000021245	cpsf1	96	79.325	ENSDORG00000006278	Cpsf1	99	79.325	Dipodomys_ordii
ENSMMOG00000021245	cpsf1	100	44.104	FBgn0024698	Cpsf160	100	44.744	Drosophila_melanogaster
ENSMMOG00000021245	cpsf1	80	83.221	ENSETEG00000006022	CPSF1	83	83.221	Echinops_telfairi
ENSMMOG00000021245	cpsf1	100	78.867	ENSEASG00005010774	CPSF1	100	79.006	Equus_asinus_asinus
ENSMMOG00000021245	cpsf1	100	78.729	ENSECAG00000022209	CPSF1	100	78.867	Equus_caballus
ENSMMOG00000021245	cpsf1	100	79.172	ENSEEUG00000000471	CPSF1	100	78.882	Erinaceus_europaeus
ENSMMOG00000021245	cpsf1	100	86.445	ENSELUG00000012271	cpsf1	100	86.929	Esox_lucius
ENSMMOG00000021245	cpsf1	100	79.377	ENSFDAG00000016060	CPSF1	100	79.239	Fukomys_damarensis
ENSMMOG00000021245	cpsf1	100	89.521	ENSFHEG00000016801	cpsf1	100	89.521	Fundulus_heteroclitus
ENSMMOG00000021245	cpsf1	100	86.713	ENSGMOG00000000796	cpsf1	100	87.059	Gadus_morhua
ENSMMOG00000021245	cpsf1	95	89.286	ENSGAFG00000018890	cpsf1	100	89.286	Gambusia_affinis
ENSMMOG00000021245	cpsf1	100	90.614	ENSGACG00000008703	cpsf1	100	90.821	Gasterosteus_aculeatus
ENSMMOG00000021245	cpsf1	100	78.285	ENSGAGG00000004276	CPSF1	98	82.206	Gopherus_agassizii
ENSMMOG00000021245	cpsf1	100	78.824	ENSGGOG00000016185	CPSF1	100	78.824	Gorilla_gorilla
ENSMMOG00000021245	cpsf1	100	92.812	ENSHBUG00000018900	cpsf1	100	93.022	Haplochromis_burtoni
ENSMMOG00000021245	cpsf1	100	79.377	ENSHGLG00000016139	CPSF1	100	79.239	Heterocephalus_glaber_female
ENSMMOG00000021245	cpsf1	100	79.308	ENSHGLG00100009750	CPSF1	100	79.170	Heterocephalus_glaber_male
ENSMMOG00000021245	cpsf1	100	87.780	ENSHCOG00000018509	cpsf1	100	87.508	Hippocampus_comes
ENSMMOG00000021245	cpsf1	100	82.692	ENSIPUG00000011259	cpsf1	100	82.853	Ictalurus_punctatus
ENSMMOG00000021245	cpsf1	96	79.328	ENSSTOG00000009957	CPSF1	99	79.185	Ictidomys_tridecemlineatus
ENSMMOG00000021245	cpsf1	100	79.377	ENSJJAG00000023002	Cpsf1	100	79.239	Jaculus_jaculus
ENSMMOG00000021245	cpsf1	91	94.671	ENSKMAG00000001940	cpsf1	99	94.671	Kryptolebias_marmoratus
ENSMMOG00000021245	cpsf1	100	89.514	ENSLBEG00000003601	cpsf1	100	89.834	Labrus_bergylta
ENSMMOG00000021245	cpsf1	88	78.589	ENSLACG00000000233	CPSF1	91	78.469	Latimeria_chalumnae
ENSMMOG00000021245	cpsf1	100	82.402	ENSLOCG00000008484	cpsf1	100	82.816	Lepisosteus_oculatus
ENSMMOG00000021245	cpsf1	96	79.427	ENSLAFG00000022601	CPSF1	99	79.355	Loxodonta_africana
ENSMMOG00000021245	cpsf1	100	78.838	ENSMFAG00000037013	CPSF1	100	78.838	Macaca_fascicularis
ENSMMOG00000021245	cpsf1	100	78.838	ENSMMUG00000007380	CPSF1	100	78.838	Macaca_mulatta
ENSMMOG00000021245	cpsf1	96	79.541	ENSMNEG00000043564	CPSF1	99	79.541	Macaca_nemestrina
ENSMMOG00000021245	cpsf1	100	78.838	ENSMLEG00000043010	CPSF1	100	78.838	Mandrillus_leucophaeus
ENSMMOG00000021245	cpsf1	100	90.399	ENSMAMG00000003803	cpsf1	100	90.940	Mastacembelus_armatus
ENSMMOG00000021245	cpsf1	100	89.525	ENSMZEG00005001168	cpsf1	100	89.735	Maylandia_zebra
ENSMMOG00000021245	cpsf1	100	79.170	ENSMAUG00000003601	Cpsf1	100	78.962	Mesocricetus_auratus
ENSMMOG00000021245	cpsf1	100	79.031	ENSMICG00000015767	CPSF1	100	78.616	Microcebus_murinus
ENSMMOG00000021245	cpsf1	100	79.100	ENSMOCG00000022758	Cpsf1	100	78.962	Microtus_ochrogaster
ENSMMOG00000021245	cpsf1	100	79.284	ENSMODG00000010755	CPSF1	100	79.353	Monodelphis_domestica
ENSMMOG00000021245	cpsf1	100	89.912	ENSMALG00000020545	cpsf1	100	89.777	Monopterus_albus
ENSMMOG00000021245	cpsf1	100	79.377	MGP_CAROLIEiJ_G0019936	Cpsf1	100	79.239	Mus_caroli
ENSMMOG00000021245	cpsf1	100	79.308	ENSMUSG00000034022	Cpsf1	100	79.170	Mus_musculus
ENSMMOG00000021245	cpsf1	100	79.446	MGP_PahariEiJ_G0019946	Cpsf1	100	79.308	Mus_pahari
ENSMMOG00000021245	cpsf1	100	79.377	MGP_SPRETEiJ_G0020839	Cpsf1	100	79.239	Mus_spretus
ENSMMOG00000021245	cpsf1	94	79.364	ENSMPUG00000006419	CPSF1	93	79.512	Mustela_putorius_furo
ENSMMOG00000021245	cpsf1	100	79.239	ENSNGAG00000022460	Cpsf1	100	79.100	Nannospalax_galili
ENSMMOG00000021245	cpsf1	100	86.319	ENSNBRG00000000813	cpsf1	100	86.620	Neolamprologus_brichardi
ENSMMOG00000021245	cpsf1	86	68.919	ENSNLEG00000010633	-	100	78.241	Nomascus_leucogenys
ENSMMOG00000021245	cpsf1	81	84.884	ENSMEUG00000014922	CPSF1	85	84.884	Notamacropus_eugenii
ENSMMOG00000021245	cpsf1	60	88.421	ENSOPRG00000004693	-	70	88.421	Ochotona_princeps
ENSMMOG00000021245	cpsf1	100	79.377	ENSODEG00000013995	CPSF1	100	79.239	Octodon_degus
ENSMMOG00000021245	cpsf1	100	92.585	ENSONIG00000007676	cpsf1	100	92.862	Oreochromis_niloticus
ENSMMOG00000021245	cpsf1	58	78.571	ENSOANG00000010716	CPSF1	89	78.571	Ornithorhynchus_anatinus
ENSMMOG00000021245	cpsf1	100	88.435	ENSORLG00000013544	cpsf1	100	88.571	Oryzias_latipes
ENSMMOG00000021245	cpsf1	100	88.435	ENSORLG00020021693	cpsf1	100	88.571	Oryzias_latipes_hni
ENSMMOG00000021245	cpsf1	100	88.503	ENSORLG00015009979	cpsf1	100	88.639	Oryzias_latipes_hsok
ENSMMOG00000021245	cpsf1	100	88.147	ENSOMEG00000011849	cpsf1	100	88.624	Oryzias_melastigma
ENSMMOG00000021245	cpsf1	100	79.322	ENSOGAG00000000315	CPSF1	100	79.184	Otolemur_garnettii
ENSMMOG00000021245	cpsf1	100	78.838	ENSPPAG00000019280	CPSF1	100	80.090	Pan_paniscus
ENSMMOG00000021245	cpsf1	100	77.498	ENSPTRG00000051253	-	100	80.090	Pan_troglodytes
ENSMMOG00000021245	cpsf1	100	78.838	ENSPTRG00000049288	-	100	80.090	Pan_troglodytes
ENSMMOG00000021245	cpsf1	96	79.541	ENSPANG00000015005	CPSF1	99	79.541	Papio_anubis
ENSMMOG00000021245	cpsf1	100	86.574	ENSPKIG00000002582	cpsf1	100	86.884	Paramormyrops_kingsleyae
ENSMMOG00000021245	cpsf1	100	79.353	ENSPCIG00000009035	CPSF1	100	79.422	Phascolarctos_cinereus
ENSMMOG00000021245	cpsf1	100	88.016	ENSPFOG00000012870	cpsf1	100	87.881	Poecilia_formosa
ENSMMOG00000021245	cpsf1	100	87.754	ENSPREG00000016307	cpsf1	100	87.810	Poecilia_reticulata
ENSMMOG00000021245	cpsf1	100	72.218	ENSPPYG00000018973	CPSF1	100	71.804	Pongo_abelii
ENSMMOG00000021245	cpsf1	91	84.375	ENSPCAG00000011541	CPSF1	94	84.375	Procavia_capensis
ENSMMOG00000021245	cpsf1	100	75.831	ENSPCOG00000020001	CPSF1	100	78.241	Propithecus_coquereli
ENSMMOG00000021245	cpsf1	90	87.143	ENSPVAG00000006761	CPSF1	91	87.143	Pteropus_vampyrus
ENSMMOG00000021245	cpsf1	100	91.391	ENSPNYG00000004906	cpsf1	100	91.598	Pundamilia_nyererei
ENSMMOG00000021245	cpsf1	100	82.927	ENSPNAG00000024395	cpsf1	100	82.927	Pygocentrus_nattereri
ENSMMOG00000021245	cpsf1	100	79.239	ENSRNOG00000030705	Cpsf1	100	79.100	Rattus_norvegicus
ENSMMOG00000021245	cpsf1	100	78.700	ENSRBIG00000044907	CPSF1	100	78.907	Rhinopithecus_bieti
ENSMMOG00000021245	cpsf1	100	78.769	ENSRROG00000044861	CPSF1	100	78.976	Rhinopithecus_roxellana
ENSMMOG00000021245	cpsf1	96	79.541	ENSSBOG00000027177	CPSF1	99	79.397	Saimiri_boliviensis_boliviensis
ENSMMOG00000021245	cpsf1	100	79.215	ENSSHAG00000006500	CPSF1	100	79.215	Sarcophilus_harrisii
ENSMMOG00000021245	cpsf1	100	84.759	ENSSFOG00015004606	cpsf1	100	87.546	Scleropages_formosus
ENSMMOG00000021245	cpsf1	100	89.641	ENSSMAG00000020547	cpsf1	100	89.641	Scophthalmus_maximus
ENSMMOG00000021245	cpsf1	100	94.196	ENSSDUG00000001100	cpsf1	100	94.196	Seriola_dumerili
ENSMMOG00000021245	cpsf1	100	93.506	ENSSLDG00000003619	cpsf1	100	93.575	Seriola_lalandi_dorsalis
ENSMMOG00000021245	cpsf1	89	75.826	ENSSARG00000003643	CPSF1	92	75.745	Sorex_araneus
ENSMMOG00000021245	cpsf1	96	82.197	ENSSPUG00000014396	CPSF1	100	82.125	Sphenodon_punctatus
ENSMMOG00000021245	cpsf1	100	90.798	ENSSPAG00000005349	cpsf1	100	90.798	Stegastes_partitus
ENSMMOG00000021245	cpsf1	100	78.077	ENSSSCG00000005906	CPSF1	100	78.008	Sus_scrofa
ENSMMOG00000021245	cpsf1	96	88.858	ENSTRUG00000013134	cpsf1	99	88.507	Takifugu_rubripes
ENSMMOG00000021245	cpsf1	100	89.911	ENSTNIG00000014027	cpsf1	100	89.842	Tetraodon_nigroviridis
ENSMMOG00000021245	cpsf1	77	74.567	ENSTBEG00000001756	CPSF1	91	74.048	Tupaia_belangeri
ENSMMOG00000021245	cpsf1	89	83.448	ENSTTRG00000001937	CPSF1	90	83.276	Tursiops_truncatus
ENSMMOG00000021245	cpsf1	96	79.728	ENSUAMG00000006476	CPSF1	98	79.370	Ursus_americanus
ENSMMOG00000021245	cpsf1	100	89.422	ENSXCOG00000003608	cpsf1	100	89.840	Xiphophorus_couchianus
ENSMMOG00000021245	cpsf1	100	89.540	ENSXMAG00000005798	cpsf1	100	89.679	Xiphophorus_maculatus