EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMOG00000021521 (Gene tree)
Gene ID: -
Gene Symbol: trnau1apb
Alias: secp43|trnau1ap|trnau1apl|trspap1|wu:fa56b07|wu:fc12c07|wu:fc69f09|zgc:113964|zgc:77884
Full Name: tRNA selenocysteine 1 associated protein 1b
Gene Type: protein_coding
Species: Mola_mola
Status: putative
Strand: Minus strand
Length: 7375 bases
Position: chrKV751329.1:6257665-6265039
Accession: ZDB-GENE-040426-2386
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMOP00000028491	RRM_1	PF00076.22	5.2e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMOT00000028973	-	1012	-	ENSMMOP00000028491	337 (aa)	-	-

Gene Model

Click here to download ENSMMOG00000021521's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMOG00000021521's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMOG00000021521	trnau1apb	98	34.024	ENSMMOG00000012107	trnau1apa	75	38.525

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMOG00000021521	trnau1apb	100	68.421	ENSAPOG00000010086	trnau1apb	96	69.118	Acanthochromis_polyacanthus
ENSMMOG00000021521	trnau1apb	100	73.021	ENSACIG00000001863	trnau1apb	97	73.021	Amphilophus_citrinellus
ENSMMOG00000021521	trnau1apb	100	77.681	ENSAOCG00000011891	trnau1apb	97	78.261	Amphiprion_ocellaris
ENSMMOG00000021521	trnau1apb	100	73.837	ENSAPEG00000008029	trnau1apb	97	77.101	Amphiprion_percula
ENSMMOG00000021521	trnau1apb	100	77.681	ENSATEG00000002196	trnau1apb	97	78.551	Anabas_testudineus
ENSMMOG00000021521	trnau1apb	100	71.965	ENSACLG00000003016	trnau1apb	97	70.402	Astatotilapia_calliptera
ENSMMOG00000021521	trnau1apb	100	56.433	ENSAMXG00000001805	trnau1apb	97	56.305	Astyanax_mexicanus
ENSMMOG00000021521	trnau1apb	99	74.561	ENSCSEG00000018215	trnau1apb	96	76.023	Cynoglossus_semilaevis
ENSMMOG00000021521	trnau1apb	95	66.066	ENSCVAG00000017866	trnau1apb	97	71.171	Cyprinodon_variegatus
ENSMMOG00000021521	trnau1apb	100	56.268	ENSDARG00000056475	trnau1apb	96	57.143	Danio_rerio
ENSMMOG00000021521	trnau1apb	100	52.770	ENSELUG00000016683	trnau1apb	96	55.556	Esox_lucius
ENSMMOG00000021521	trnau1apb	100	73.639	ENSFHEG00000001267	trnau1apb	97	73.639	Fundulus_heteroclitus
ENSMMOG00000021521	trnau1apb	100	62.921	ENSGMOG00000001160	trnau1apb	97	64.943	Gadus_morhua
ENSMMOG00000021521	trnau1apb	78	78.351	ENSGAFG00000006770	trnau1apb	96	66.764	Gambusia_affinis
ENSMMOG00000021521	trnau1apb	100	71.221	ENSGACG00000014944	trnau1apb	97	74.709	Gasterosteus_aculeatus
ENSMMOG00000021521	trnau1apb	71	36.842	ENSGAGG00000022384	-	80	36.437	Gopherus_agassizii
ENSMMOG00000021521	trnau1apb	100	76.744	ENSHBUG00000018944	trnau1apb	96	76.744	Haplochromis_burtoni
ENSMMOG00000021521	trnau1apb	78	67.170	ENSHCOG00000011350	trnau1apb	82	67.647	Hippocampus_comes
ENSMMOG00000021521	trnau1apb	100	54.493	ENSIPUG00000008843	tsp1l	97	57.895	Ictalurus_punctatus
ENSMMOG00000021521	trnau1apb	100	71.098	ENSKMAG00000010082	trnau1apb	96	73.699	Kryptolebias_marmoratus
ENSMMOG00000021521	trnau1apb	100	76.093	ENSLBEG00000020480	trnau1apb	97	76.093	Labrus_bergylta
ENSMMOG00000021521	trnau1apb	100	45.402	ENSLOCG00000013175	trnau1apb	96	44.898	Lepisosteus_oculatus
ENSMMOG00000021521	trnau1apb	100	79.300	ENSMAMG00000012192	trnau1apb	97	79.300	Mastacembelus_armatus
ENSMMOG00000021521	trnau1apb	100	76.744	ENSMZEG00005014852	trnau1apb	96	76.744	Maylandia_zebra
ENSMMOG00000021521	trnau1apb	67	35.745	ENSMGAG00000003234	-	94	34.615	Meleagris_gallopavo
ENSMMOG00000021521	trnau1apb	100	66.077	ENSMALG00000003772	trnau1apb	96	64.307	Monopterus_albus
ENSMMOG00000021521	trnau1apb	100	72.174	ENSNBRG00000000751	trnau1apb	98	70.605	Neolamprologus_brichardi
ENSMMOG00000021521	trnau1apb	99	66.667	ENSONIG00000016639	trnau1apb	96	65.294	Oreochromis_niloticus
ENSMMOG00000021521	trnau1apb	70	74.583	ENSORLG00000013265	trnau1apb	97	73.066	Oryzias_latipes
ENSMMOG00000021521	trnau1apb	100	72.911	ENSORLG00020004464	trnau1apb	97	73.775	Oryzias_latipes_hni
ENSMMOG00000021521	trnau1apb	100	72.622	ENSORLG00015021098	trnau1apb	97	73.487	Oryzias_latipes_hsok
ENSMMOG00000021521	trnau1apb	100	68.768	ENSOMEG00000016531	trnau1apb	97	75.072	Oryzias_melastigma
ENSMMOG00000021521	trnau1apb	57	68.205	ENSPKIG00000007995	trnau1apb	96	53.143	Paramormyrops_kingsleyae
ENSMMOG00000021521	trnau1apb	71	38.462	ENSPSIG00000004189	-	79	37.247	Pelodiscus_sinensis
ENSMMOG00000021521	trnau1apb	78	82.759	ENSPMGG00000018509	trnau1apb	97	54.867	Periophthalmus_magnuspinnatus
ENSMMOG00000021521	trnau1apb	100	72.493	ENSPFOG00000003938	trnau1apb	97	72.493	Poecilia_formosa
ENSMMOG00000021521	trnau1apb	100	72.493	ENSPLAG00000015480	trnau1apb	97	72.493	Poecilia_latipinna
ENSMMOG00000021521	trnau1apb	100	72.493	ENSPMEG00000012743	trnau1apb	97	72.493	Poecilia_mexicana
ENSMMOG00000021521	trnau1apb	100	72.206	ENSPREG00000015035	trnau1apb	97	72.206	Poecilia_reticulata
ENSMMOG00000021521	trnau1apb	100	69.364	ENSPNYG00000012127	trnau1apb	97	67.816	Pundamilia_nyererei
ENSMMOG00000021521	trnau1apb	100	57.391	ENSPNAG00000019138	trnau1apb	96	57.602	Pygocentrus_nattereri
ENSMMOG00000021521	trnau1apb	100	52.941	ENSSFOG00015014158	trnau1apb	96	55.587	Scleropages_formosus
ENSMMOG00000021521	trnau1apb	100	74.783	ENSSMAG00000001745	trnau1apb	98	75.581	Scophthalmus_maximus
ENSMMOG00000021521	trnau1apb	100	78.261	ENSSDUG00000011109	trnau1apb	97	79.710	Seriola_dumerili
ENSMMOG00000021521	trnau1apb	100	77.971	ENSSLDG00000012947	trnau1apb	97	79.420	Seriola_lalandi_dorsalis
ENSMMOG00000021521	trnau1apb	67	34.000	ENSSPUG00000016701	-	79	34.387	Sphenodon_punctatus
ENSMMOG00000021521	trnau1apb	100	78.841	ENSSPAG00000006917	trnau1apb	97	78.841	Stegastes_partitus
ENSMMOG00000021521	trnau1apb	100	70.809	ENSTRUG00000008608	trnau1apb	96	72.414	Takifugu_rubripes
ENSMMOG00000021521	trnau1apb	99	59.882	ENSTNIG00000000916	trnau1apb	96	59.587	Tetraodon_nigroviridis
ENSMMOG00000021521	trnau1apb	94	65.749	ENSXCOG00000007974	trnau1apb	91	65.749	Xiphophorus_couchianus
ENSMMOG00000021521	trnau1apb	100	72.779	ENSXMAG00000029918	trnau1apb	97	72.779	Xiphophorus_maculatus