EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000000630 (Gene tree)
Gene ID: 707745
Gene Symbol: RC3H1
Alias: KIAA2025|RNF198|RP5-1198E17.5|roquin
Full Name: ring finger and CCCH-type domains 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 88298 bases
Position: chr1:193538375-193626672
Accession: 707745
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000046279	zf-CCCH	PF00642.24	0.00031	1	1
ENSMMUP00000042796	zf-CCCH	PF00642.24	0.00032	1	1
ENSMMUP00000000844	zf-CCCH	PF00642.24	0.00033	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000000906	RC3H1-201	5591	XM_001102746	ENSMMUP00000000844	1133 (aa)	XP_001102746	F6Y0L7
ENSMMUT00000060679	RC3H1-202	3607	XM_001102837	ENSMMUP00000042796	1125 (aa)	XP_001102837	A0A1D5Q433
ENSMMUT00000062069	RC3H1-203	3312	-	ENSMMUP00000046279	1103 (aa)	-	A0A1D5QE10

Gene Model

Click here to download ENSMMUG00000000630's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000000630's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000000630	RC3H1	97	53.239	ENSMMUG00000021134	RC3H2	94	83.223

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000000630	RC3H1	100	99.117	ENSG00000135870	RC3H1	100	99.117	Homo_sapiens
ENSMMUG00000000630	RC3H1	100	96.911	ENSAMEG00000015657	RC3H1	100	96.911	Ailuropoda_melanoleuca
ENSMMUG00000000630	RC3H1	100	88.317	ENSAPLG00000005341	RC3H1	100	88.317	Anas_platyrhynchos
ENSMMUG00000000630	RC3H1	100	85.253	ENSACAG00000015271	RC3H1	100	85.253	Anolis_carolinensis
ENSMMUG00000000630	RC3H1	100	98.941	ENSANAG00000036716	RC3H1	100	98.941	Aotus_nancymaae
ENSMMUG00000000630	RC3H1	100	96.711	ENSBTAG00000052708	RC3H1	100	96.711	Bos_taurus
ENSMMUG00000000630	RC3H1	100	98.588	ENSCJAG00000009106	RC3H1	100	98.588	Callithrix_jacchus
ENSMMUG00000000630	RC3H1	100	96.999	ENSCAFG00000014434	RC3H1	100	96.999	Canis_familiaris
ENSMMUG00000000630	RC3H1	100	96.914	ENSCAFG00020017112	RC3H1	99	98.202	Canis_lupus_dingo
ENSMMUG00000000630	RC3H1	100	96.889	ENSCHIG00000002873	RC3H1	100	96.889	Capra_hircus
ENSMMUG00000000630	RC3H1	99	95.410	ENSTSYG00000003913	RC3H1	99	95.410	Carlito_syrichta
ENSMMUG00000000630	RC3H1	100	91.711	ENSCPOG00000004349	RC3H1	100	91.446	Cavia_porcellus
ENSMMUG00000000630	RC3H1	100	96.558	ENSCCAG00000025652	RC3H1	98	98.565	Cebus_capucinus
ENSMMUG00000000630	RC3H1	100	99.823	ENSCATG00000033497	RC3H1	100	99.823	Cercocebus_atys
ENSMMUG00000000630	RC3H1	100	95.062	ENSCLAG00000011267	RC3H1	100	95.062	Chinchilla_lanigera
ENSMMUG00000000630	RC3H1	98	99.538	ENSCSAG00000011823	RC3H1	85	99.355	Chlorocebus_sabaeus
ENSMMUG00000000630	RC3H1	100	89.825	ENSCPBG00000014670	RC3H1	100	96.304	Chrysemys_picta_bellii
ENSMMUG00000000630	RC3H1	100	99.471	ENSCANG00000032120	RC3H1	100	99.471	Colobus_angolensis_palliatus
ENSMMUG00000000630	RC3H1	100	94.351	ENSCGRG00001020812	Rc3h1	100	93.910	Cricetulus_griseus_chok1gshd
ENSMMUG00000000630	RC3H1	100	94.351	ENSCGRG00000011952	Rc3h1	100	93.910	Cricetulus_griseus_crigri
ENSMMUG00000000630	RC3H1	56	95.498	ENSDNOG00000011494	RC3H1	99	95.806	Dasypus_novemcinctus
ENSMMUG00000000630	RC3H1	100	95.852	ENSDORG00000004855	Rc3h1	100	95.852	Dipodomys_ordii
ENSMMUG00000000630	RC3H1	82	97.006	ENSETEG00000012064	RC3H1	87	97.006	Echinops_telfairi
ENSMMUG00000000630	RC3H1	100	96.622	ENSEASG00005017000	RC3H1	100	96.622	Equus_asinus_asinus
ENSMMUG00000000630	RC3H1	100	96.444	ENSECAG00000021208	RC3H1	100	96.444	Equus_caballus
ENSMMUG00000000630	RC3H1	83	97.059	ENSEEUG00000014861	RC3H1	93	83.302	Erinaceus_europaeus
ENSMMUG00000000630	RC3H1	100	97.529	ENSFCAG00000014924	RC3H1	100	97.529	Felis_catus
ENSMMUG00000000630	RC3H1	100	87.336	ENSFALG00000002947	RC3H1	100	86.812	Ficedula_albicollis
ENSMMUG00000000630	RC3H1	100	95.238	ENSFDAG00000013303	RC3H1	100	95.238	Fukomys_damarensis
ENSMMUG00000000630	RC3H1	100	88.074	ENSGALG00000004587	RC3H1	100	88.074	Gallus_gallus
ENSMMUG00000000630	RC3H1	100	88.791	ENSGAGG00000018194	RC3H1	100	89.056	Gopherus_agassizii
ENSMMUG00000000630	RC3H1	100	92.172	ENSGGOG00000005735	RC3H1	100	92.172	Gorilla_gorilla
ENSMMUG00000000630	RC3H1	88	88.904	ENSHGLG00000004183	-	99	88.859	Heterocephalus_glaber_female
ENSMMUG00000000630	RC3H1	100	94.621	ENSHGLG00100008577	RC3H1	100	94.621	Heterocephalus_glaber_male
ENSMMUG00000000630	RC3H1	100	96.561	ENSSTOG00000016033	RC3H1	100	96.561	Ictidomys_tridecemlineatus
ENSMMUG00000000630	RC3H1	100	95.057	ENSJJAG00000018915	Rc3h1	100	94.793	Jaculus_jaculus
ENSMMUG00000000630	RC3H1	100	75.478	ENSLACG00000016186	RC3H1	100	78.594	Latimeria_chalumnae
ENSMMUG00000000630	RC3H1	98	97.330	ENSLAFG00000004367	RC3H1	100	97.450	Loxodonta_africana
ENSMMUG00000000630	RC3H1	100	99.735	ENSMFAG00000033725	RC3H1	100	99.735	Macaca_fascicularis
ENSMMUG00000000630	RC3H1	100	99.823	ENSMNEG00000035968	RC3H1	100	99.823	Macaca_nemestrina
ENSMMUG00000000630	RC3H1	100	99.735	ENSMLEG00000037455	RC3H1	100	99.735	Mandrillus_leucophaeus
ENSMMUG00000000630	RC3H1	97	94.556	ENSMAUG00000020864	Rc3h1	100	94.052	Mesocricetus_auratus
ENSMMUG00000000630	RC3H1	100	97.440	ENSMICG00000003000	RC3H1	100	97.440	Microcebus_murinus
ENSMMUG00000000630	RC3H1	93	92.992	ENSMOCG00000016587	Rc3h1	98	92.614	Microtus_ochrogaster
ENSMMUG00000000630	RC3H1	100	92.328	ENSMODG00000004289	RC3H1	100	92.416	Monodelphis_domestica
ENSMMUG00000000630	RC3H1	100	93.910	MGP_CAROLIEiJ_G0014756	Rc3h1	100	93.469	Mus_caroli
ENSMMUG00000000630	RC3H1	100	93.733	ENSMUSG00000040423	Rc3h1	100	93.292	Mus_musculus
ENSMMUG00000000630	RC3H1	100	93.557	MGP_PahariEiJ_G0027992	Rc3h1	100	93.116	Mus_pahari
ENSMMUG00000000630	RC3H1	100	93.557	MGP_SPRETEiJ_G0015563	Rc3h1	100	93.116	Mus_spretus
ENSMMUG00000000630	RC3H1	100	96.649	ENSMPUG00000004747	RC3H1	100	96.649	Mustela_putorius_furo
ENSMMUG00000000630	RC3H1	100	95.499	ENSMLUG00000011127	RC3H1	100	95.499	Myotis_lucifugus
ENSMMUG00000000630	RC3H1	100	95.763	ENSNGAG00000011135	Rc3h1	100	95.322	Nannospalax_galili
ENSMMUG00000000630	RC3H1	100	99.029	ENSNLEG00000015327	RC3H1	100	99.029	Nomascus_leucogenys
ENSMMUG00000000630	RC3H1	99	82.935	ENSOPRG00000013068	RC3H1	99	83.024	Ochotona_princeps
ENSMMUG00000000630	RC3H1	100	94.709	ENSODEG00000014185	RC3H1	100	94.709	Octodon_degus
ENSMMUG00000000630	RC3H1	100	91.703	ENSOANG00000000924	RC3H1	100	91.616	Ornithorhynchus_anatinus
ENSMMUG00000000630	RC3H1	99	95.971	ENSOCUG00000004930	RC3H1	98	95.971	Oryctolagus_cuniculus
ENSMMUG00000000630	RC3H1	100	90.220	ENSOGAG00000004044	RC3H1	100	90.220	Otolemur_garnettii
ENSMMUG00000000630	RC3H1	100	96.491	ENSOARG00000013011	RC3H1	100	96.491	Ovis_aries
ENSMMUG00000000630	RC3H1	100	99.118	ENSPPAG00000039253	RC3H1	100	99.118	Pan_paniscus
ENSMMUG00000000630	RC3H1	100	97.511	ENSPPRG00000009007	RC3H1	100	97.511	Panthera_pardus
ENSMMUG00000000630	RC3H1	100	97.188	ENSPTIG00000015326	RC3H1	100	97.188	Panthera_tigris_altaica
ENSMMUG00000000630	RC3H1	100	99.118	ENSPTRG00000001702	RC3H1	100	99.118	Pan_troglodytes
ENSMMUG00000000630	RC3H1	100	99.735	ENSPANG00000008886	RC3H1	100	99.735	Papio_anubis
ENSMMUG00000000630	RC3H1	100	89.585	ENSPSIG00000016181	RC3H1	100	89.850	Pelodiscus_sinensis
ENSMMUG00000000630	RC3H1	100	93.733	ENSPEMG00000011966	Rc3h1	100	93.380	Peromyscus_maniculatus_bairdii
ENSMMUG00000000630	RC3H1	72	94.430	ENSPCIG00000002058	RC3H1	95	98.430	Phascolarctos_cinereus
ENSMMUG00000000630	RC3H1	100	95.763	ENSPPYG00000000490	RC3H1	98	99.228	Pongo_abelii
ENSMMUG00000000630	RC3H1	81	100.000	ENSPCAG00000010775	RC3H1	87	100.000	Procavia_capensis
ENSMMUG00000000630	RC3H1	83	96.688	ENSPCOG00000021795	RC3H1	96	96.688	Propithecus_coquereli
ENSMMUG00000000630	RC3H1	100	87.820	ENSPVAG00000007593	RC3H1	100	87.820	Pteropus_vampyrus
ENSMMUG00000000630	RC3H1	97	62.659	ENSPNAG00000023439	rc3h1a	95	90.991	Pygocentrus_nattereri
ENSMMUG00000000630	RC3H1	100	99.559	ENSRBIG00000037743	RC3H1	100	99.559	Rhinopithecus_bieti
ENSMMUG00000000630	RC3H1	100	99.470	ENSRROG00000036546	RC3H1	100	99.470	Rhinopithecus_roxellana
ENSMMUG00000000630	RC3H1	93	93.702	ENSSBOG00000010664	RC3H1	100	93.702	Saimiri_boliviensis_boliviensis
ENSMMUG00000000630	RC3H1	100	91.189	ENSSHAG00000007589	RC3H1	100	91.278	Sarcophilus_harrisii
ENSMMUG00000000630	RC3H1	87	86.712	ENSSARG00000004660	RC3H1	86	86.712	Sorex_araneus
ENSMMUG00000000630	RC3H1	100	84.501	ENSSPUG00000018472	RC3H1	100	83.961	Sphenodon_punctatus
ENSMMUG00000000630	RC3H1	100	97.529	ENSSSCG00000015498	RC3H1	100	97.529	Sus_scrofa
ENSMMUG00000000630	RC3H1	100	87.632	ENSTGUG00000004090	RC3H1	100	87.632	Taeniopygia_guttata
ENSMMUG00000000630	RC3H1	89	97.561	ENSTBEG00000005015	RC3H1	89	97.561	Tupaia_belangeri
ENSMMUG00000000630	RC3H1	100	96.740	ENSTTRG00000008572	RC3H1	100	96.740	Tursiops_truncatus
ENSMMUG00000000630	RC3H1	100	96.293	ENSUAMG00000019525	RC3H1	100	96.293	Ursus_americanus
ENSMMUG00000000630	RC3H1	100	96.825	ENSUMAG00000020087	RC3H1	100	96.825	Ursus_maritimus
ENSMMUG00000000630	RC3H1	91	98.649	ENSVPAG00000002591	RC3H1	92	98.649	Vicugna_pacos
ENSMMUG00000000630	RC3H1	100	96.658	ENSVVUG00000014201	RC3H1	100	96.658	Vulpes_vulpes
ENSMMUG00000000630	RC3H1	100	79.112	ENSXETG00000020030	rc3h1	100	78.659	Xenopus_tropicalis