EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000000829 (Gene tree)
Gene ID: 700614
Gene Symbol: SMARCA5
Alias: -
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 5
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 41041 bases
Position: chr5:143584053-143625093
Accession: 700614
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000011564	ResIII	PF04851.15	9.6e-11	1	1
ENSMMUP00000001125	ResIII	PF04851.15	1e-10	1	1
ENSMMUP00000011564	DEAD	PF00270.29	5.1e-06	1	1
ENSMMUP00000001125	DEAD	PF00270.29	6.3e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000001198	-	4059	-	ENSMMUP00000001125	1052 (aa)	-	F6Q1Z2
ENSMMUT00000054357	-	1032	-	ENSMMUP00000046951	343 (aa)	-	A0A1D5QFY1
ENSMMUT00000012331	-	2925	-	ENSMMUP00000011564	974 (aa)	-	F7EXG1

Gene Model

Click here to download ENSMMUG00000000829's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000000829's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000000829	SMARCA5	51	48.000	ENSMMUG00000017255	HELLS	75	48.000
ENSMMUG00000000829	SMARCA5	98	86.164	ENSMMUG00000008818	SMARCA1	97	86.752
ENSMMUG00000000829	SMARCA5	58	43.630	ENSMMUG00000009024	CHD1L	85	46.933
ENSMMUG00000000829	SMARCA5	56	42.637	ENSMMUG00000012042	SMARCA4	57	45.309
ENSMMUG00000000829	SMARCA5	53	42.259	ENSMMUG00000020458	CHD6	72	41.162

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000000829	SMARCA5	100	99.810	ENSG00000153147	SMARCA5	100	99.810	Homo_sapiens
ENSMMUG00000000829	SMARCA5	100	98.859	ENSAMEG00000009585	SMARCA5	100	98.859	Ailuropoda_melanoleuca
ENSMMUG00000000829	SMARCA5	97	96.767	ENSAPLG00000009206	SMARCA5	100	96.612	Anas_platyrhynchos
ENSMMUG00000000829	SMARCA5	98	97.263	ENSACAG00000003038	SMARCA5	99	93.816	Anolis_carolinensis
ENSMMUG00000000829	SMARCA5	100	99.430	ENSANAG00000019345	SMARCA5	100	99.430	Aotus_nancymaae
ENSMMUG00000000829	SMARCA5	100	98.289	ENSBTAG00000003399	SMARCA5	100	98.289	Bos_taurus
ENSMMUG00000000829	SMARCA5	100	99.620	ENSCJAG00000002735	SMARCA5	100	99.620	Callithrix_jacchus
ENSMMUG00000000829	SMARCA5	100	98.669	ENSCAFG00000007525	SMARCA5	100	98.669	Canis_familiaris
ENSMMUG00000000829	SMARCA5	98	99.371	ENSCAFG00020025641	SMARCA5	99	98.643	Canis_lupus_dingo
ENSMMUG00000000829	SMARCA5	100	97.053	ENSCHIG00000016375	-	100	97.053	Capra_hircus
ENSMMUG00000000829	SMARCA5	100	98.764	ENSCHIG00000013730	-	100	98.764	Capra_hircus
ENSMMUG00000000829	SMARCA5	97	99.578	ENSTSYG00000009954	SMARCA5	99	99.597	Carlito_syrichta
ENSMMUG00000000829	SMARCA5	98	98.633	ENSCAPG00000013747	SMARCA5	95	98.967	Cavia_aperea
ENSMMUG00000000829	SMARCA5	100	98.004	ENSCPOG00000002259	SMARCA5	100	98.004	Cavia_porcellus
ENSMMUG00000000829	SMARCA5	100	99.620	ENSCCAG00000027215	SMARCA5	100	99.620	Cebus_capucinus
ENSMMUG00000000829	SMARCA5	100	100.000	ENSCATG00000044917	SMARCA5	100	100.000	Cercocebus_atys
ENSMMUG00000000829	SMARCA5	97	99.262	ENSCLAG00000006153	SMARCA5	100	99.295	Chinchilla_lanigera
ENSMMUG00000000829	SMARCA5	97	99.895	ENSCSAG00000003448	SMARCA5	100	100.000	Chlorocebus_sabaeus
ENSMMUG00000000829	SMARCA5	90	98.292	ENSCHOG00000011724	SMARCA5	90	98.292	Choloepus_hoffmanni
ENSMMUG00000000829	SMARCA5	97	98.314	ENSCPBG00000027535	SMARCA5	96	98.094	Chrysemys_picta_bellii
ENSMMUG00000000829	SMARCA5	100	99.810	ENSCANG00000041629	SMARCA5	100	99.810	Colobus_angolensis_palliatus
ENSMMUG00000000829	SMARCA5	99	97.909	ENSCGRG00001012719	Smarca5	99	97.909	Cricetulus_griseus_chok1gshd
ENSMMUG00000000829	SMARCA5	97	99.367	ENSCGRG00000001417	Smarca5	99	99.396	Cricetulus_griseus_crigri
ENSMMUG00000000829	SMARCA5	97	96.519	ENSDNOG00000009158	SMARCA5	98	95.455	Dasypus_novemcinctus
ENSMMUG00000000829	SMARCA5	98	90.407	ENSDORG00000003466	Smarca5	98	90.407	Dipodomys_ordii
ENSMMUG00000000829	SMARCA5	97	86.272	ENSEBUG00000014773	SMARCA5	96	85.744	Eptatretus_burgeri
ENSMMUG00000000829	SMARCA5	100	99.049	ENSEASG00005001866	SMARCA5	100	99.049	Equus_asinus_asinus
ENSMMUG00000000829	SMARCA5	100	99.049	ENSECAG00000002676	SMARCA5	100	99.049	Equus_caballus
ENSMMUG00000000829	SMARCA5	97	94.937	ENSEEUG00000013176	SMARCA5	100	95.065	Erinaceus_europaeus
ENSMMUG00000000829	SMARCA5	98	89.695	ENSELUG00000014653	SMARCA5	99	89.485	Esox_lucius
ENSMMUG00000000829	SMARCA5	100	98.859	ENSFCAG00000004544	SMARCA5	100	98.859	Felis_catus
ENSMMUG00000000829	SMARCA5	97	97.260	ENSFALG00000004987	SMARCA5	100	97.216	Ficedula_albicollis
ENSMMUG00000000829	SMARCA5	97	99.367	ENSFDAG00000021016	SMARCA5	100	99.496	Fukomys_damarensis
ENSMMUG00000000829	SMARCA5	97	89.779	ENSGMOG00000007519	SMARCA5	94	89.560	Gadus_morhua
ENSMMUG00000000829	SMARCA5	97	97.893	ENSGALG00000009913	SMARCA5	96	97.490	Gallus_gallus
ENSMMUG00000000829	SMARCA5	97	91.043	ENSGACG00000017238	SMARCA5	95	90.686	Gasterosteus_aculeatus
ENSMMUG00000000829	SMARCA5	97	98.419	ENSGAGG00000019882	SMARCA5	96	98.195	Gopherus_agassizii
ENSMMUG00000000829	SMARCA5	100	99.810	ENSGGOG00000012595	SMARCA5	100	99.810	Gorilla_gorilla
ENSMMUG00000000829	SMARCA5	98	89.391	ENSHGLG00000000317	-	95	89.659	Heterocephalus_glaber_female
ENSMMUG00000000829	SMARCA5	100	98.004	ENSHGLG00000000816	-	99	98.004	Heterocephalus_glaber_female
ENSMMUG00000000829	SMARCA5	97	99.262	ENSHGLG00100018421	-	100	99.396	Heterocephalus_glaber_male
ENSMMUG00000000829	SMARCA5	100	98.670	ENSSTOG00000010683	SMARCA5	99	98.670	Ictidomys_tridecemlineatus
ENSMMUG00000000829	SMARCA5	100	97.529	ENSJJAG00000014965	Smarca5	100	97.529	Jaculus_jaculus
ENSMMUG00000000829	SMARCA5	97	96.938	ENSLACG00000007091	SMARCA5	97	95.358	Latimeria_chalumnae
ENSMMUG00000000829	SMARCA5	97	93.031	ENSLOCG00000008966	SMARCA5	96	92.284	Lepisosteus_oculatus
ENSMMUG00000000829	SMARCA5	100	98.669	ENSLAFG00000007795	SMARCA5	100	98.669	Loxodonta_africana
ENSMMUG00000000829	SMARCA5	100	100.000	ENSMFAG00000043649	SMARCA5	100	100.000	Macaca_fascicularis
ENSMMUG00000000829	SMARCA5	100	100.000	ENSMNEG00000031916	SMARCA5	100	100.000	Macaca_nemestrina
ENSMMUG00000000829	SMARCA5	100	100.000	ENSMLEG00000042393	SMARCA5	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000000829	SMARCA5	97	97.893	ENSMGAG00000003517	SMARCA5	99	97.100	Meleagris_gallopavo
ENSMMUG00000000829	SMARCA5	97	99.367	ENSMAUG00000015902	Smarca5	98	99.496	Mesocricetus_auratus
ENSMMUG00000000829	SMARCA5	100	99.049	ENSMICG00000003971	SMARCA5	100	99.049	Microcebus_murinus
ENSMMUG00000000829	SMARCA5	99	97.529	ENSMOCG00000016986	-	99	97.529	Microtus_ochrogaster
ENSMMUG00000000829	SMARCA5	97	99.051	ENSMODG00000000391	SMARCA5	98	96.990	Monodelphis_domestica
ENSMMUG00000000829	SMARCA5	100	97.814	ENSMUSG00000031715	Smarca5	100	97.814	Mus_musculus
ENSMMUG00000000829	SMARCA5	100	98.004	MGP_PahariEiJ_G0022862	Smarca5	100	98.004	Mus_pahari
ENSMMUG00000000829	SMARCA5	100	98.859	ENSMLUG00000000468	SMARCA5	100	98.859	Myotis_lucifugus
ENSMMUG00000000829	SMARCA5	100	98.004	ENSNGAG00000000441	Smarca5	100	98.004	Nannospalax_galili
ENSMMUG00000000829	SMARCA5	100	100.000	ENSNLEG00000005383	SMARCA5	100	100.000	Nomascus_leucogenys
ENSMMUG00000000829	SMARCA5	94	94.841	ENSMEUG00000001267	SMARCA5	100	91.322	Notamacropus_eugenii
ENSMMUG00000000829	SMARCA5	89	98.429	ENSOPRG00000014427	SMARCA5	86	98.429	Ochotona_princeps
ENSMMUG00000000829	SMARCA5	97	99.051	ENSOANG00000013921	SMARCA5	100	98.968	Ornithorhynchus_anatinus
ENSMMUG00000000829	SMARCA5	97	99.473	ENSOCUG00000013042	SMARCA5	100	99.587	Oryctolagus_cuniculus
ENSMMUG00000000829	SMARCA5	100	99.049	ENSOGAG00000009702	SMARCA5	100	99.049	Otolemur_garnettii
ENSMMUG00000000829	SMARCA5	99	98.573	ENSOARG00000010589	SMARCA5	99	98.573	Ovis_aries
ENSMMUG00000000829	SMARCA5	100	99.620	ENSPPAG00000028523	SMARCA5	100	99.620	Pan_paniscus
ENSMMUG00000000829	SMARCA5	97	93.457	ENSPPRG00000004925	SMARCA5	98	94.004	Panthera_pardus
ENSMMUG00000000829	SMARCA5	97	99.473	ENSPTIG00000020959	SMARCA5	97	99.208	Panthera_tigris_altaica
ENSMMUG00000000829	SMARCA5	100	99.715	ENSPTRG00000016472	SMARCA5	100	99.715	Pan_troglodytes
ENSMMUG00000000829	SMARCA5	100	100.000	ENSPANG00000001175	SMARCA5	100	100.000	Papio_anubis
ENSMMUG00000000829	SMARCA5	97	91.570	ENSPKIG00000015885	SMARCA5	100	91.237	Paramormyrops_kingsleyae
ENSMMUG00000000829	SMARCA5	97	91.043	ENSPKIG00000015699	SMARCA5	98	89.716	Paramormyrops_kingsleyae
ENSMMUG00000000829	SMARCA5	97	95.996	ENSPSIG00000004177	SMARCA5	100	95.988	Pelodiscus_sinensis
ENSMMUG00000000829	SMARCA5	97	90.612	ENSPMGG00000012316	SMARCA5	100	90.226	Periophthalmus_magnuspinnatus
ENSMMUG00000000829	SMARCA5	97	99.367	ENSPEMG00000008060	Smarca5	99	97.741	Peromyscus_maniculatus_bairdii
ENSMMUG00000000829	SMARCA5	64	87.261	ENSPMAG00000008026	SMARCA5	99	86.739	Petromyzon_marinus
ENSMMUG00000000829	SMARCA5	97	72.059	ENSPMAG00000006011	SMARCA5	81	85.440	Petromyzon_marinus
ENSMMUG00000000829	SMARCA5	97	99.051	ENSPCIG00000003926	SMARCA5	98	96.799	Phascolarctos_cinereus
ENSMMUG00000000829	SMARCA5	100	99.905	ENSPPYG00000015091	SMARCA5	100	99.905	Pongo_abelii
ENSMMUG00000000829	SMARCA5	86	95.667	ENSPCAG00000014230	SMARCA5	90	90.390	Procavia_capensis
ENSMMUG00000000829	SMARCA5	100	96.293	ENSPCOG00000026744	SMARCA5	100	96.293	Propithecus_coquereli
ENSMMUG00000000829	SMARCA5	99	98.573	ENSPVAG00000006482	SMARCA5	100	98.573	Pteropus_vampyrus
ENSMMUG00000000829	SMARCA5	97	91.341	ENSPNAG00000027824	SMARCA5	96	91.341	Pygocentrus_nattereri
ENSMMUG00000000829	SMARCA5	97	99.262	ENSRNOG00000018149	Smarca5	100	99.296	Rattus_norvegicus
ENSMMUG00000000829	SMARCA5	100	99.810	ENSRBIG00000044644	SMARCA5	100	99.810	Rhinopithecus_bieti
ENSMMUG00000000829	SMARCA5	98	100.000	ENSRROG00000029591	SMARCA5	99	99.899	Rhinopithecus_roxellana
ENSMMUG00000000829	SMARCA5	100	99.335	ENSSBOG00000036257	SMARCA5	100	99.335	Saimiri_boliviensis_boliviensis
ENSMMUG00000000829	SMARCA5	97	99.051	ENSSHAG00000008464	SMARCA5	100	98.993	Sarcophilus_harrisii
ENSMMUG00000000829	SMARCA5	97	91.570	ENSSFOG00015013252	SMARCA5	97	90.050	Scleropages_formosus
ENSMMUG00000000829	SMARCA5	97	96.312	ENSSPUG00000007604	SMARCA5	99	96.281	Sphenodon_punctatus
ENSMMUG00000000829	SMARCA5	100	98.194	ENSSSCG00000009047	SMARCA5	100	98.194	Sus_scrofa
ENSMMUG00000000829	SMARCA5	97	97.155	ENSTGUG00000002408	SMARCA5	99	95.929	Taeniopygia_guttata
ENSMMUG00000000829	SMARCA5	98	99.061	ENSUAMG00000023495	SMARCA5	99	98.837	Ursus_americanus
ENSMMUG00000000829	SMARCA5	97	99.473	ENSUMAG00000015324	SMARCA5	97	99.402	Ursus_maritimus
ENSMMUG00000000829	SMARCA5	100	98.289	ENSVPAG00000008982	SMARCA5	100	98.289	Vicugna_pacos
ENSMMUG00000000829	SMARCA5	100	98.859	ENSVVUG00000017473	SMARCA5	100	98.859	Vulpes_vulpes
ENSMMUG00000000829	SMARCA5	94	94.444	ENSXETG00000017566	smarca5	95	93.122	Xenopus_tropicalis