EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000000842 (Gene tree)
Gene ID: 722393
Gene Symbol: RPUSD1
Alias: C16orf40|MGC19600|RLUCL
Full Name: RNA pseudouridine synthase domain containing 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 3402 bases
Position: chr20:773180-776581
Accession: 722393
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000042295	PseudoU_synth_2	PF00849.22	3.8e-24	1	1
ENSMMUP00000001134	PseudoU_synth_2	PF00849.22	2.9e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000058315	RPUSD1-201	2582	XM_015125245	ENSMMUP00000042295	312 (aa)	XP_014980731	G7NQQ6
ENSMMUT00000001208	RPUSD1-202	396	-	ENSMMUP00000001134	131 (aa)	-	F6Q1H6

Gene Model

Click here to download ENSMMUG00000000842's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000000842's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000000842	RPUSD1	100	97.710	ENSG00000007376	RPUSD1	100	97.710	Homo_sapiens
ENSMMUG00000000842	RPUSD1	98	56.721	ENSAPOG00000022221	rpusd1	98	55.844	Acanthochromis_polyacanthus
ENSMMUG00000000842	RPUSD1	100	81.410	ENSAMEG00000007461	RPUSD1	100	80.769	Ailuropoda_melanoleuca
ENSMMUG00000000842	RPUSD1	98	57.516	ENSACIG00000015863	rpusd1	98	57.792	Amphilophus_citrinellus
ENSMMUG00000000842	RPUSD1	98	56.066	ENSAOCG00000021975	rpusd1	95	56.410	Amphiprion_ocellaris
ENSMMUG00000000842	RPUSD1	98	55.738	ENSAPEG00000001316	rpusd1	95	56.090	Amphiprion_percula
ENSMMUG00000000842	RPUSD1	78	73.529	ENSATEG00000002984	rpusd1	98	57.605	Anabas_testudineus
ENSMMUG00000000842	RPUSD1	79	58.704	ENSAPLG00000012316	RPUSD1	99	58.704	Anas_platyrhynchos
ENSMMUG00000000842	RPUSD1	99	66.452	ENSACAG00000008953	RPUSD1	100	64.968	Anolis_carolinensis
ENSMMUG00000000842	RPUSD1	100	94.551	ENSANAG00000024709	RPUSD1	100	94.551	Aotus_nancymaae
ENSMMUG00000000842	RPUSD1	98	58.576	ENSACLG00000013692	rpusd1	98	58.252	Astatotilapia_calliptera
ENSMMUG00000000842	RPUSD1	99	57.929	ENSAMXG00000019802	rpusd1	100	57.643	Astyanax_mexicanus
ENSMMUG00000000842	RPUSD1	100	86.859	ENSBTAG00000000179	RPUSD1	100	86.859	Bos_taurus
ENSMMUG00000000842	RPUSD1	100	94.231	ENSCJAG00000012253	RPUSD1	100	94.231	Callithrix_jacchus
ENSMMUG00000000842	RPUSD1	99	81.994	ENSCAFG00000019614	RPUSD1	99	82.637	Canis_familiaris
ENSMMUG00000000842	RPUSD1	99	81.994	ENSCAFG00020008891	RPUSD1	99	82.637	Canis_lupus_dingo
ENSMMUG00000000842	RPUSD1	100	85.577	ENSCHIG00000012872	RPUSD1	100	85.577	Capra_hircus
ENSMMUG00000000842	RPUSD1	100	92.366	ENSTSYG00000036934	RPUSD1	100	92.366	Carlito_syrichta
ENSMMUG00000000842	RPUSD1	100	83.654	ENSCAPG00000014219	RPUSD1	100	83.013	Cavia_aperea
ENSMMUG00000000842	RPUSD1	100	83.654	ENSCPOG00000034604	RPUSD1	100	83.013	Cavia_porcellus
ENSMMUG00000000842	RPUSD1	100	94.872	ENSCCAG00000034385	RPUSD1	100	94.872	Cebus_capucinus
ENSMMUG00000000842	RPUSD1	100	100.000	ENSCATG00000042983	RPUSD1	100	100.000	Cercocebus_atys
ENSMMUG00000000842	RPUSD1	100	83.013	ENSCLAG00000013966	RPUSD1	100	83.333	Chinchilla_lanigera
ENSMMUG00000000842	RPUSD1	100	99.359	ENSCSAG00000012121	RPUSD1	100	99.359	Chlorocebus_sabaeus
ENSMMUG00000000842	RPUSD1	92	76.667	ENSCPBG00000021101	RPUSD1	99	66.019	Chrysemys_picta_bellii
ENSMMUG00000000842	RPUSD1	100	99.237	ENSCANG00000028576	RPUSD1	100	99.288	Colobus_angolensis_palliatus
ENSMMUG00000000842	RPUSD1	100	82.372	ENSCGRG00001014253	Rpusd1	100	80.449	Cricetulus_griseus_chok1gshd
ENSMMUG00000000842	RPUSD1	100	82.372	ENSCGRG00000017995	Rpusd1	100	80.449	Cricetulus_griseus_crigri
ENSMMUG00000000842	RPUSD1	79	73.786	ENSCSEG00000007648	-	100	73.786	Cynoglossus_semilaevis
ENSMMUG00000000842	RPUSD1	99	55.663	ENSCSEG00000018512	rpusd1	100	55.663	Cynoglossus_semilaevis
ENSMMUG00000000842	RPUSD1	98	56.352	ENSCVAG00000022746	rpusd1	98	55.195	Cyprinodon_variegatus
ENSMMUG00000000842	RPUSD1	89	72.414	ENSDARG00000060192	rpusd1	100	58.654	Danio_rerio
ENSMMUG00000000842	RPUSD1	100	84.615	ENSDNOG00000003721	RPUSD1	100	84.615	Dasypus_novemcinctus
ENSMMUG00000000842	RPUSD1	100	84.615	ENSDORG00000026656	Rpusd1	100	84.936	Dipodomys_ordii
ENSMMUG00000000842	RPUSD1	99	46.462	ENSEBUG00000008767	rpusd1	94	46.154	Eptatretus_burgeri
ENSMMUG00000000842	RPUSD1	99	85.397	ENSEASG00005018421	RPUSD1	75	86.984	Equus_asinus_asinus
ENSMMUG00000000842	RPUSD1	98	53.398	ENSELUG00000014307	rpusd1	88	50.774	Esox_lucius
ENSMMUG00000000842	RPUSD1	100	83.969	ENSFCAG00000010359	RPUSD1	99	83.969	Felis_catus
ENSMMUG00000000842	RPUSD1	89	78.448	ENSFALG00000003211	RPUSD1	100	64.194	Ficedula_albicollis
ENSMMUG00000000842	RPUSD1	100	84.615	ENSFDAG00000013398	RPUSD1	100	83.654	Fukomys_damarensis
ENSMMUG00000000842	RPUSD1	98	54.754	ENSFHEG00000004736	rpusd1	98	55.410	Fundulus_heteroclitus
ENSMMUG00000000842	RPUSD1	98	56.066	ENSGMOG00000010756	rpusd1	98	56.066	Gadus_morhua
ENSMMUG00000000842	RPUSD1	92	75.000	ENSGALG00000005315	RPUSD1	100	63.754	Gallus_gallus
ENSMMUG00000000842	RPUSD1	98	55.949	ENSGAFG00000009886	rpusd1	98	56.393	Gambusia_affinis
ENSMMUG00000000842	RPUSD1	76	74.000	ENSGACG00000014276	rpusd1	97	56.436	Gasterosteus_aculeatus
ENSMMUG00000000842	RPUSD1	79	85.437	ENSGAGG00000004181	RPUSD1	99	65.372	Gopherus_agassizii
ENSMMUG00000000842	RPUSD1	100	97.710	ENSGGOG00000013997	RPUSD1	100	97.710	Gorilla_gorilla
ENSMMUG00000000842	RPUSD1	98	58.252	ENSHBUG00000023728	rpusd1	98	57.929	Haplochromis_burtoni
ENSMMUG00000000842	RPUSD1	100	83.654	ENSHGLG00000002595	RPUSD1	100	83.333	Heterocephalus_glaber_female
ENSMMUG00000000842	RPUSD1	100	83.654	ENSHGLG00100014303	RPUSD1	100	83.333	Heterocephalus_glaber_male
ENSMMUG00000000842	RPUSD1	79	77.670	ENSHCOG00000020005	-	97	77.670	Hippocampus_comes
ENSMMUG00000000842	RPUSD1	79	77.670	ENSHCOG00000002390	rpusd1	99	57.655	Hippocampus_comes
ENSMMUG00000000842	RPUSD1	99	59.416	ENSIPUG00000001570	rpusd1	99	59.416	Ictalurus_punctatus
ENSMMUG00000000842	RPUSD1	100	88.141	ENSSTOG00000004276	RPUSD1	100	87.500	Ictidomys_tridecemlineatus
ENSMMUG00000000842	RPUSD1	100	85.577	ENSJJAG00000015696	Rpusd1	100	84.936	Jaculus_jaculus
ENSMMUG00000000842	RPUSD1	98	55.700	ENSKMAG00000017287	rpusd1	98	56.066	Kryptolebias_marmoratus
ENSMMUG00000000842	RPUSD1	98	57.049	ENSLBEG00000022502	rpusd1	98	57.049	Labrus_bergylta
ENSMMUG00000000842	RPUSD1	98	57.049	ENSLBEG00000013354	RPUSD1	98	57.049	Labrus_bergylta
ENSMMUG00000000842	RPUSD1	99	61.364	ENSLACG00000008869	RPUSD1	99	61.364	Latimeria_chalumnae
ENSMMUG00000000842	RPUSD1	79	79.612	ENSLOCG00000005682	rpusd1	99	71.759	Lepisosteus_oculatus
ENSMMUG00000000842	RPUSD1	100	82.051	ENSLAFG00000002115	RPUSD1	100	82.051	Loxodonta_africana
ENSMMUG00000000842	RPUSD1	100	100.000	ENSMFAG00000003961	RPUSD1	100	100.000	Macaca_fascicularis
ENSMMUG00000000842	RPUSD1	100	100.000	ENSMNEG00000042712	RPUSD1	100	100.000	Macaca_nemestrina
ENSMMUG00000000842	RPUSD1	100	100.000	ENSMLEG00000030591	RPUSD1	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000000842	RPUSD1	98	57.190	ENSMAMG00000004735	rpusd1	98	57.190	Mastacembelus_armatus
ENSMMUG00000000842	RPUSD1	98	58.576	ENSMZEG00005003214	rpusd1	98	58.252	Maylandia_zebra
ENSMMUG00000000842	RPUSD1	86	75.221	ENSMGAG00000005447	RPUSD1	99	62.914	Meleagris_gallopavo
ENSMMUG00000000842	RPUSD1	79	93.204	ENSMAUG00000019998	Rpusd1	100	77.068	Mesocricetus_auratus
ENSMMUG00000000842	RPUSD1	100	93.130	ENSMICG00000017561	RPUSD1	100	93.130	Microcebus_murinus
ENSMMUG00000000842	RPUSD1	99	83.601	ENSMOCG00000014082	Rpusd1	99	83.280	Microtus_ochrogaster
ENSMMUG00000000842	RPUSD1	82	72.222	ENSMMOG00000012569	rpusd1	99	55.882	Mola_mola
ENSMMUG00000000842	RPUSD1	100	66.772	ENSMODG00000016882	RPUSD1	100	66.772	Monodelphis_domestica
ENSMMUG00000000842	RPUSD1	98	58.442	ENSMALG00000017818	rpusd1	98	58.117	Monopterus_albus
ENSMMUG00000000842	RPUSD1	100	83.333	MGP_CAROLIEiJ_G0021244	Rpusd1	100	83.013	Mus_caroli
ENSMMUG00000000842	RPUSD1	100	83.654	ENSMUSG00000041199	Rpusd1	100	83.333	Mus_musculus
ENSMMUG00000000842	RPUSD1	100	81.529	MGP_PahariEiJ_G0023562	Rpusd1	99	82.315	Mus_pahari
ENSMMUG00000000842	RPUSD1	100	83.654	MGP_SPRETEiJ_G0022155	Rpusd1	100	83.333	Mus_spretus
ENSMMUG00000000842	RPUSD1	100	80.769	ENSMPUG00000015897	RPUSD1	100	80.128	Mustela_putorius_furo
ENSMMUG00000000842	RPUSD1	100	87.500	ENSMLUG00000001089	RPUSD1	100	87.500	Myotis_lucifugus
ENSMMUG00000000842	RPUSD1	100	84.936	ENSNGAG00000003595	Rpusd1	100	84.295	Nannospalax_galili
ENSMMUG00000000842	RPUSD1	98	57.516	ENSNBRG00000006457	rpusd1	98	57.792	Neolamprologus_brichardi
ENSMMUG00000000842	RPUSD1	56	95.429	ENSNLEG00000008424	-	100	95.429	Nomascus_leucogenys
ENSMMUG00000000842	RPUSD1	100	69.231	ENSMEUG00000016049	RPUSD1	100	68.269	Notamacropus_eugenii
ENSMMUG00000000842	RPUSD1	99	77.097	ENSOPRG00000008340	RPUSD1	99	76.129	Ochotona_princeps
ENSMMUG00000000842	RPUSD1	100	82.051	ENSODEG00000016945	RPUSD1	100	81.731	Octodon_degus
ENSMMUG00000000842	RPUSD1	98	57.605	ENSONIG00000015672	rpusd1	99	57.282	Oreochromis_niloticus
ENSMMUG00000000842	RPUSD1	79	74.757	ENSOANG00000030625	-	79	73.585	Ornithorhynchus_anatinus
ENSMMUG00000000842	RPUSD1	88	69.565	ENSORLG00000013009	rpusd1	99	57.468	Oryzias_latipes
ENSMMUG00000000842	RPUSD1	88	68.696	ENSORLG00020010382	rpusd1	99	57.143	Oryzias_latipes_hni
ENSMMUG00000000842	RPUSD1	99	56.494	ENSORLG00015021354	rpusd1	99	56.494	Oryzias_latipes_hsok
ENSMMUG00000000842	RPUSD1	94	66.129	ENSOMEG00000021426	rpusd1	98	56.721	Oryzias_melastigma
ENSMMUG00000000842	RPUSD1	100	90.385	ENSOGAG00000003795	RPUSD1	100	90.385	Otolemur_garnettii
ENSMMUG00000000842	RPUSD1	100	86.218	ENSOARG00000014254	RPUSD1	100	86.218	Ovis_aries
ENSMMUG00000000842	RPUSD1	100	96.947	ENSPPAG00000034797	RPUSD1	100	96.947	Pan_paniscus
ENSMMUG00000000842	RPUSD1	100	83.206	ENSPPRG00000012389	RPUSD1	99	83.206	Panthera_pardus
ENSMMUG00000000842	RPUSD1	100	83.206	ENSPTIG00000008545	RPUSD1	99	83.206	Panthera_tigris_altaica
ENSMMUG00000000842	RPUSD1	100	96.947	ENSPTRG00000007565	RPUSD1	100	96.947	Pan_troglodytes
ENSMMUG00000000842	RPUSD1	100	99.359	ENSPANG00000024401	RPUSD1	100	99.359	Papio_anubis
ENSMMUG00000000842	RPUSD1	99	59.547	ENSPKIG00000018890	rpusd1	91	58.095	Paramormyrops_kingsleyae
ENSMMUG00000000842	RPUSD1	92	77.500	ENSPSIG00000013945	RPUSD1	100	66.019	Pelodiscus_sinensis
ENSMMUG00000000842	RPUSD1	98	56.721	ENSPMGG00000014950	rpusd1	98	56.721	Periophthalmus_magnuspinnatus
ENSMMUG00000000842	RPUSD1	100	82.372	ENSPEMG00000000497	Rpusd1	100	82.692	Peromyscus_maniculatus_bairdii
ENSMMUG00000000842	RPUSD1	79	62.500	ENSPMAG00000001563	rpusd1	81	56.000	Petromyzon_marinus
ENSMMUG00000000842	RPUSD1	100	68.269	ENSPCIG00000021216	-	94	67.628	Phascolarctos_cinereus
ENSMMUG00000000842	RPUSD1	98	58.170	ENSPFOG00000007946	rpusd1	98	57.843	Poecilia_formosa
ENSMMUG00000000842	RPUSD1	98	58.170	ENSPLAG00000011925	rpusd1	98	57.843	Poecilia_latipinna
ENSMMUG00000000842	RPUSD1	98	57.516	ENSPMEG00000002910	rpusd1	98	57.190	Poecilia_mexicana
ENSMMUG00000000842	RPUSD1	98	57.655	ENSPREG00000019851	rpusd1	98	57.190	Poecilia_reticulata
ENSMMUG00000000842	RPUSD1	100	67.949	ENSPCAG00000002258	RPUSD1	100	67.949	Procavia_capensis
ENSMMUG00000000842	RPUSD1	100	91.603	ENSPCOG00000022582	RPUSD1	100	91.603	Propithecus_coquereli
ENSMMUG00000000842	RPUSD1	100	85.256	ENSPVAG00000013104	RPUSD1	100	85.256	Pteropus_vampyrus
ENSMMUG00000000842	RPUSD1	98	58.252	ENSPNYG00000024076	rpusd1	98	57.929	Pundamilia_nyererei
ENSMMUG00000000842	RPUSD1	98	55.882	ENSPNAG00000013806	rpusd1	87	62.403	Pygocentrus_nattereri
ENSMMUG00000000842	RPUSD1	100	83.974	ENSRNOG00000023639	Rpusd1	100	83.654	Rattus_norvegicus
ENSMMUG00000000842	RPUSD1	100	100.000	ENSRBIG00000030238	RPUSD1	100	100.000	Rhinopithecus_bieti
ENSMMUG00000000842	RPUSD1	100	100.000	ENSRROG00000036663	RPUSD1	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000000842	RPUSD1	100	90.385	ENSSBOG00000033063	RPUSD1	100	91.346	Saimiri_boliviensis_boliviensis
ENSMMUG00000000842	RPUSD1	100	67.949	ENSSHAG00000013500	RPUSD1	100	67.949	Sarcophilus_harrisii
ENSMMUG00000000842	RPUSD1	99	61.489	ENSSFOG00015014394	rpusd1	99	60.841	Scleropages_formosus
ENSMMUG00000000842	RPUSD1	98	56.393	ENSSMAG00000008045	rpusd1	91	56.393	Scophthalmus_maximus
ENSMMUG00000000842	RPUSD1	82	72.072	ENSSDUG00000001829	rpusd1	95	59.016	Seriola_dumerili
ENSMMUG00000000842	RPUSD1	82	72.072	ENSSLDG00000020853	rpusd1	95	59.016	Seriola_lalandi_dorsalis
ENSMMUG00000000842	RPUSD1	54	89.820	ENSSARG00000011187	-	100	89.820	Sorex_araneus
ENSMMUG00000000842	RPUSD1	63	54.040	ENSSPUG00000005119	-	100	53.266	Sphenodon_punctatus
ENSMMUG00000000842	RPUSD1	98	57.049	ENSSPAG00000012708	rpusd1	98	57.049	Stegastes_partitus
ENSMMUG00000000842	RPUSD1	100	86.218	ENSSSCG00000008000	RPUSD1	98	89.764	Sus_scrofa
ENSMMUG00000000842	RPUSD1	92	76.667	ENSTGUG00000015375	RPUSD1	100	72.157	Taeniopygia_guttata
ENSMMUG00000000842	RPUSD1	98	56.311	ENSTRUG00000003041	rpusd1	98	56.494	Takifugu_rubripes
ENSMMUG00000000842	RPUSD1	78	75.490	ENSTNIG00000002660	rpusd1	99	53.595	Tetraodon_nigroviridis
ENSMMUG00000000842	RPUSD1	99	87.781	ENSTTRG00000010167	RPUSD1	99	87.781	Tursiops_truncatus
ENSMMUG00000000842	RPUSD1	100	81.090	ENSUAMG00000012736	RPUSD1	100	81.090	Ursus_americanus
ENSMMUG00000000842	RPUSD1	100	81.731	ENSUMAG00000021174	RPUSD1	100	81.090	Ursus_maritimus
ENSMMUG00000000842	RPUSD1	99	81.029	ENSVVUG00000012357	RPUSD1	99	81.029	Vulpes_vulpes
ENSMMUG00000000842	RPUSD1	83	77.982	ENSXETG00000007184	rpusd1	100	60.256	Xenopus_tropicalis
ENSMMUG00000000842	RPUSD1	98	56.209	ENSXCOG00000017930	rpusd1	98	55.410	Xiphophorus_couchianus
ENSMMUG00000000842	RPUSD1	98	56.863	ENSXMAG00000024084	rpusd1	98	56.393	Xiphophorus_maculatus