EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000001016 (Gene tree)
Gene ID: 723811
Gene Symbol: APOBEC3H
Alias: -
Full Name: apolipoprotein B mRNA editing enzyme catalytic subunit 3H
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 12792 bases
Position: chr10:81065771-81078562
Accession: 723811
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000043691	APOBEC_N	PF08210.11	9.6e-36	1	1
ENSMMUP00000053576	APOBEC_N	PF08210.11	1.6e-34	1	1
ENSMMUP00000001363	APOBEC_N	PF08210.11	3.5e-31	1	1
ENSMMUP00000053642	APOBEC_N	PF08210.11	1.2e-27	1	1
ENSMMUP00000043691	APOBEC_C	PF05240.14	1.7e-27	1	1
ENSMMUP00000053576	APOBEC_C	PF05240.14	1.9e-27	1	1
ENSMMUP00000001363	APOBEC_C	PF05240.14	1.7e-21	1	1
ENSMMUP00000053642	APOBEC_C	PF05240.14	5.6e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000057997	-	465	-	ENSMMUP00000053642	154 (aa)	-	A0A1D5R009
ENSMMUT00000069638	-	1457	XM_015150340	ENSMMUP00000053576	224 (aa)	XP_015005826	A0A1D5QZU3
ENSMMUT00000078853	-	1478	XM_015150343	ENSMMUP00000043691	210 (aa)	XP_015005829	A0A1D5Q6M5
ENSMMUT00000001449	-	630	-	ENSMMUP00000001363	209 (aa)	-	F6SJ45

Gene Model

Click here to download ENSMMUG00000001016's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000001016's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000001016	APOBEC3H	93	33.831	ENSMMUG00000019134	AICDA	98	33.831
ENSMMUG00000001016	APOBEC3H	90	33.990	ENSMMUG00000004015	-	98	33.990
ENSMMUG00000001016	APOBEC3H	92	34.043	ENSMMUG00000004017	APOBEC3F	95	35.795
ENSMMUG00000001016	APOBEC3H	91	32.653	ENSMMUG00000004018	APOBEC3C	93	34.574
ENSMMUG00000001016	APOBEC3H	89	34.158	ENSMMUG00000042504	APOBEC3A	92	36.269
ENSMMUG00000001016	APOBEC3H	88	40.171	ENSMMUG00000039346	APOBEC3G	89	37.173

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000001016	APOBEC3H	100	84.416	ENSG00000100298	APOBEC3H	100	84.416	Homo_sapiens
ENSMMUG00000001016	APOBEC3H	97	46.907	ENSAMEG00000010818	-	87	46.907	Ailuropoda_melanoleuca
ENSMMUG00000001016	APOBEC3H	94	73.632	ENSANAG00000025410	APOBEC3H	96	72.430	Aotus_nancymaae
ENSMMUG00000001016	APOBEC3H	99	51.667	ENSBTAG00000007755	APOBEC3H	94	51.667	Bos_taurus
ENSMMUG00000001016	APOBEC3H	100	72.078	ENSCJAG00000012524	APOBEC3H	100	72.078	Callithrix_jacchus
ENSMMUG00000001016	APOBEC3H	94	50.254	ENSCAFG00000001361	APOBEC3Z3	100	50.254	Canis_familiaris
ENSMMUG00000001016	APOBEC3H	95	48.744	ENSCAFG00020002584	-	91	51.111	Canis_lupus_dingo
ENSMMUG00000001016	APOBEC3H	94	51.111	ENSCHIG00000026580	-	96	51.111	Capra_hircus
ENSMMUG00000001016	APOBEC3H	99	48.684	ENSTSYG00000032894	-	100	51.685	Carlito_syrichta
ENSMMUG00000001016	APOBEC3H	99	53.623	ENSCPOG00000009257	-	93	53.623	Cavia_porcellus
ENSMMUG00000001016	APOBEC3H	100	73.885	ENSCCAG00000008525	APOBEC3H	100	73.885	Cebus_capucinus
ENSMMUG00000001016	APOBEC3H	100	94.805	ENSCATG00000030302	APOBEC3H	100	94.805	Cercocebus_atys
ENSMMUG00000001016	APOBEC3H	95	53.000	ENSCLAG00000016615	-	98	53.000	Chinchilla_lanigera
ENSMMUG00000001016	APOBEC3H	100	92.891	ENSCSAG00000006371	APOBEC3H	100	92.891	Chlorocebus_sabaeus
ENSMMUG00000001016	APOBEC3H	95	53.431	ENSCGRG00001022976	Apobec3	92	53.431	Cricetulus_griseus_chok1gshd
ENSMMUG00000001016	APOBEC3H	95	53.431	ENSCGRG00000005621	Apobec3	92	53.431	Cricetulus_griseus_crigri
ENSMMUG00000001016	APOBEC3H	91	51.724	ENSDORG00000027271	-	91	52.973	Dipodomys_ordii
ENSMMUG00000001016	APOBEC3H	94	51.500	ENSECAG00000007726	APOBEC3H	85	51.500	Equus_caballus
ENSMMUG00000001016	APOBEC3H	94	52.284	ENSFCAG00000005251	APOBEC3Z3	99	52.284	Felis_catus
ENSMMUG00000001016	APOBEC3H	91	54.286	ENSSTOG00000007125	-	85	53.333	Ictidomys_tridecemlineatus
ENSMMUG00000001016	APOBEC3H	88	50.735	ENSJJAG00000016840	-	82	50.735	Jaculus_jaculus
ENSMMUG00000001016	APOBEC3H	94	51.685	ENSLAFG00000027404	-	96	51.685	Loxodonta_africana
ENSMMUG00000001016	APOBEC3H	100	98.701	ENSMFAG00000031827	APOBEC3H	100	98.701	Macaca_fascicularis
ENSMMUG00000001016	APOBEC3H	100	99.351	ENSMNEG00000039259	APOBEC3H	100	99.351	Macaca_nemestrina
ENSMMUG00000001016	APOBEC3H	100	96.104	ENSMLEG00000033417	APOBEC3H	100	96.104	Mandrillus_leucophaeus
ENSMMUG00000001016	APOBEC3H	95	51.961	ENSMAUG00000011683	Apobec3	88	51.961	Mesocricetus_auratus
ENSMMUG00000001016	APOBEC3H	94	51.256	ENSMOCG00000021576	Apobec3	84	52.261	Microtus_ochrogaster
ENSMMUG00000001016	APOBEC3H	95	48.020	MGP_CAROLIEiJ_G0020029	Apobec3	99	48.020	Mus_caroli
ENSMMUG00000001016	APOBEC3H	95	44.776	ENSMUSG00000009585	Apobec3	99	46.535	Mus_musculus
ENSMMUG00000001016	APOBEC3H	95	48.780	MGP_PahariEiJ_G0020031	-	88	48.780	Mus_pahari
ENSMMUG00000001016	APOBEC3H	94	46.500	MGP_SPRETEiJ_G0020927	Apobec3	92	47.568	Mus_spretus
ENSMMUG00000001016	APOBEC3H	94	49.746	ENSMPUG00000013239	-	75	49.746	Mustela_putorius_furo
ENSMMUG00000001016	APOBEC3H	96	46.500	ENSNGAG00000018998	Apobec3	100	47.000	Nannospalax_galili
ENSMMUG00000001016	APOBEC3H	100	85.782	ENSNLEG00000015218	-	100	85.782	Nomascus_leucogenys
ENSMMUG00000001016	APOBEC3H	93	43.575	ENSOCUG00000023913	-	88	43.575	Oryctolagus_cuniculus
ENSMMUG00000001016	APOBEC3H	94	51.111	ENSOARG00000016290	APOBEC3F	97	51.111	Ovis_aries
ENSMMUG00000001016	APOBEC3H	100	83.766	ENSPPAG00000036522	APOBEC3H	100	83.766	Pan_paniscus
ENSMMUG00000001016	APOBEC3H	94	52.525	ENSPPRG00000003941	-	99	52.525	Panthera_pardus
ENSMMUG00000001016	APOBEC3H	89	37.500	ENSPPRG00000003675	-	88	35.714	Panthera_pardus
ENSMMUG00000001016	APOBEC3H	94	52.525	ENSPTIG00000010283	-	99	52.525	Panthera_tigris_altaica
ENSMMUG00000001016	APOBEC3H	100	83.766	ENSPTRG00000014390	APOBEC3H	100	83.766	Pan_troglodytes
ENSMMUG00000001016	APOBEC3H	100	95.238	ENSPANG00000010774	APOBEC3H	100	95.238	Papio_anubis
ENSMMUG00000001016	APOBEC3H	95	48.039	ENSPEMG00000000456	Apobec3	83	48.039	Peromyscus_maniculatus_bairdii
ENSMMUG00000001016	APOBEC3H	95	87.065	ENSPPYG00000011834	-	100	85.308	Pongo_abelii
ENSMMUG00000001016	APOBEC3H	87	44.444	ENSPCAG00000015655	-	98	43.017	Procavia_capensis
ENSMMUG00000001016	APOBEC3H	90	52.899	ENSPVAG00000009462	-	98	52.247	Pteropus_vampyrus
ENSMMUG00000001016	APOBEC3H	65	36.029	ENSPVAG00000024267	-	93	37.008	Pteropus_vampyrus
ENSMMUG00000001016	APOBEC3H	65	36.765	ENSPVAG00000024161	-	93	37.795	Pteropus_vampyrus
ENSMMUG00000001016	APOBEC3H	94	51.075	ENSRNOG00000016852	Apobec3	90	51.075	Rattus_norvegicus
ENSMMUG00000001016	APOBEC3H	100	90.909	ENSRBIG00000029088	APOBEC3H	100	90.909	Rhinopithecus_bieti
ENSMMUG00000001016	APOBEC3H	100	89.610	ENSRROG00000024699	APOBEC3H	100	89.610	Rhinopithecus_roxellana
ENSMMUG00000001016	APOBEC3H	99	67.299	ENSSBOG00000030005	APOBEC3H	100	73.770	Saimiri_boliviensis_boliviensis
ENSMMUG00000001016	APOBEC3H	97	53.571	ENSSSCG00000000091	APOBEC3B	92	51.659	Sus_scrofa
ENSMMUG00000001016	APOBEC3H	84	56.923	ENSTBEG00000001532	-	100	53.143	Tupaia_belangeri
ENSMMUG00000001016	APOBEC3H	88	55.147	ENSTTRG00000001266	-	100	52.198	Tursiops_truncatus
ENSMMUG00000001016	APOBEC3H	91	52.381	ENSUAMG00000004427	-	85	51.309	Ursus_americanus
ENSMMUG00000001016	APOBEC3H	95	55.102	ENSUMAG00000014435	-	99	53.299	Ursus_maritimus
ENSMMUG00000001016	APOBEC3H	56	60.920	ENSVPAG00000011108	-	98	53.846	Vicugna_pacos
ENSMMUG00000001016	APOBEC3H	92	51.786	ENSVVUG00000014624	-	61	51.786	Vulpes_vulpes