EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000001712 (Gene tree)
Gene ID: 701931
Gene Symbol: SCAF4
Alias: DKFZp434E098|KIAA1172|SFRS15|SRA4
Full Name: SR-related CTD associated factor 4
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 60466 bases
Position: chr3:14926989-14987454
Accession: 701931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000052140	RRM_1	PF00076.22	4.2e-09	1	1
ENSMMUP00000058136	RRM_1	PF00076.22	4.8e-09	1	1
ENSMMUP00000002284	RRM_1	PF00076.22	4.9e-09	1	1
ENSMMUP00000043534	RRM_1	PF00076.22	4.9e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000077744	SCAF4-203	3408	-	ENSMMUP00000052140	1135 (aa)	-	A0A1D5QVR0
ENSMMUT00000002416	SCAF4-204	3447	-	ENSMMUP00000002284	1148 (aa)	-	F7FZG5
ENSMMUT00000078470	SCAF4-202	3453	-	ENSMMUP00000043534	1150 (aa)	-	A0A1D5Q668
ENSMMUT00000054298	SCAF4-201	3490	XM_015133035	ENSMMUP00000058136	1153 (aa)	XP_014988521	A0A1D5RCU3

Gene Model

Click here to download ENSMMUG00000001712's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000001712's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000001712	SCAF4	100	98.182	ENSG00000156304	SCAF4	100	98.182	Homo_sapiens
ENSMMUG00000001712	SCAF4	78	52.620	ENSAPOG00000002946	scaf4a	55	59.091	Acanthochromis_polyacanthus
ENSMMUG00000001712	SCAF4	73	92.968	ENSAMEG00000014987	SCAF4	96	92.968	Ailuropoda_melanoleuca
ENSMMUG00000001712	SCAF4	78	53.476	ENSAOCG00000000615	scaf4a	55	58.788	Amphiprion_ocellaris
ENSMMUG00000001712	SCAF4	69	57.068	ENSAPEG00000021229	scaf4a	55	58.636	Amphiprion_percula
ENSMMUG00000001712	SCAF4	100	74.849	ENSAPLG00000002509	SCAF4	59	83.410	Anas_platyrhynchos
ENSMMUG00000001712	SCAF4	95	69.838	ENSACAG00000002569	SCAF4	52	84.146	Anolis_carolinensis
ENSMMUG00000001712	SCAF4	100	97.835	ENSANAG00000037494	SCAF4	100	97.835	Aotus_nancymaae
ENSMMUG00000001712	SCAF4	93	49.242	ENSAMXG00000008585	scaf4a	60	62.462	Astyanax_mexicanus
ENSMMUG00000001712	SCAF4	100	91.789	ENSBTAG00000018855	SCAF4	100	91.530	Bos_taurus
ENSMMUG00000001712	SCAF4	100	97.749	ENSCJAG00000008993	SCAF4	100	97.749	Callithrix_jacchus
ENSMMUG00000001712	SCAF4	99	92.751	ENSCAFG00000008863	SCAF4	100	92.677	Canis_familiaris
ENSMMUG00000001712	SCAF4	99	90.622	ENSCAFG00020026019	SCAF4	100	91.977	Canis_lupus_dingo
ENSMMUG00000001712	SCAF4	100	90.612	ENSCHIG00000008385	SCAF4	100	91.128	Capra_hircus
ENSMMUG00000001712	SCAF4	91	95.687	ENSTSYG00000011344	SCAF4	99	95.687	Carlito_syrichta
ENSMMUG00000001712	SCAF4	100	89.252	ENSCPOG00000012443	SCAF4	100	89.510	Cavia_porcellus
ENSMMUG00000001712	SCAF4	100	97.489	ENSCCAG00000033727	SCAF4	100	97.489	Cebus_capucinus
ENSMMUG00000001712	SCAF4	100	98.876	ENSCATG00000030379	SCAF4	100	98.876	Cercocebus_atys
ENSMMUG00000001712	SCAF4	99	91.594	ENSCLAG00000006298	SCAF4	100	91.508	Chinchilla_lanigera
ENSMMUG00000001712	SCAF4	100	98.702	ENSCSAG00000009438	SCAF4	100	98.702	Chlorocebus_sabaeus
ENSMMUG00000001712	SCAF4	100	98.615	ENSCANG00000029847	SCAF4	100	98.615	Colobus_angolensis_palliatus
ENSMMUG00000001712	SCAF4	69	90.116	ENSCGRG00001020821	Scaf4	100	82.387	Cricetulus_griseus_chok1gshd
ENSMMUG00000001712	SCAF4	69	89.541	ENSCGRG00000014360	Scaf4	69	85.526	Cricetulus_griseus_crigri
ENSMMUG00000001712	SCAF4	58	55.822	ENSCSEG00000012808	-	62	61.244	Cynoglossus_semilaevis
ENSMMUG00000001712	SCAF4	78	52.710	ENSCSEG00000019549	scaf4a	53	55.556	Cynoglossus_semilaevis
ENSMMUG00000001712	SCAF4	100	89.351	ENSDNOG00000019014	SCAF4	94	89.957	Dasypus_novemcinctus
ENSMMUG00000001712	SCAF4	96	79.320	ENSETEG00000000583	SCAF4	99	79.230	Echinops_telfairi
ENSMMUG00000001712	SCAF4	100	93.074	ENSEASG00005007756	SCAF4	100	93.247	Equus_asinus_asinus
ENSMMUG00000001712	SCAF4	100	92.900	ENSECAG00000014248	SCAF4	100	93.074	Equus_caballus
ENSMMUG00000001712	SCAF4	58	52.703	ENSELUG00000002779	SCAF8	61	68.116	Esox_lucius
ENSMMUG00000001712	SCAF4	100	91.897	ENSFCAG00000002228	SCAF4	100	92.155	Felis_catus
ENSMMUG00000001712	SCAF4	99	88.356	ENSFDAG00000017780	SCAF4	100	88.613	Fukomys_damarensis
ENSMMUG00000001712	SCAF4	100	75.924	ENSGALG00000033965	SCAF4	59	83.384	Gallus_gallus
ENSMMUG00000001712	SCAF4	91	95.455	ENSGGOG00000015557	SCAF4	100	98.780	Gorilla_gorilla
ENSMMUG00000001712	SCAF4	100	89.726	ENSHGLG00000010582	SCAF4	100	90.753	Heterocephalus_glaber_female
ENSMMUG00000001712	SCAF4	99	89.601	ENSHGLG00100009441	SCAF4	100	90.641	Heterocephalus_glaber_male
ENSMMUG00000001712	SCAF4	68	48.724	ENSIPUG00000011285	scaf4	63	62.707	Ictalurus_punctatus
ENSMMUG00000001712	SCAF4	99	86.484	ENSSTOG00000004450	SCAF4	100	87.367	Ictidomys_tridecemlineatus
ENSMMUG00000001712	SCAF4	99	88.143	ENSJJAG00000019447	Scaf4	99	88.579	Jaculus_jaculus
ENSMMUG00000001712	SCAF4	98	59.669	ENSLACG00000013913	SCAF4	59	69.279	Latimeria_chalumnae
ENSMMUG00000001712	SCAF4	95	56.179	ENSLOCG00000009162	scaf4a	59	67.211	Lepisosteus_oculatus
ENSMMUG00000001712	SCAF4	99	91.667	ENSLAFG00000010710	SCAF4	100	91.391	Loxodonta_africana
ENSMMUG00000001712	SCAF4	100	99.913	ENSMFAG00000037668	SCAF4	100	99.913	Macaca_fascicularis
ENSMMUG00000001712	SCAF4	100	99.480	ENSMNEG00000032966	SCAF4	100	99.480	Macaca_nemestrina
ENSMMUG00000001712	SCAF4	99	99.563	ENSMLEG00000039674	SCAF4	100	99.563	Mandrillus_leucophaeus
ENSMMUG00000001712	SCAF4	99	75.629	ENSMGAG00000014515	SCAF4	59	83.437	Meleagris_gallopavo
ENSMMUG00000001712	SCAF4	99	88.276	ENSMAUG00000013307	Scaf4	100	87.664	Mesocricetus_auratus
ENSMMUG00000001712	SCAF4	100	96.104	ENSMICG00000005256	SCAF4	100	96.104	Microcebus_murinus
ENSMMUG00000001712	SCAF4	100	84.689	ENSMOCG00000012087	Scaf4	95	90.501	Microtus_ochrogaster
ENSMMUG00000001712	SCAF4	100	84.197	ENSMODG00000021040	SCAF4	100	83.161	Monodelphis_domestica
ENSMMUG00000001712	SCAF4	100	83.415	MGP_CAROLIEiJ_G0020944	Scaf4	100	86.410	Mus_caroli
ENSMMUG00000001712	SCAF4	100	82.683	ENSMUSG00000022983	Scaf4	95	89.629	Mus_musculus
ENSMMUG00000001712	SCAF4	100	82.591	MGP_PahariEiJ_G0016649	Scaf4	100	85.897	Mus_pahari
ENSMMUG00000001712	SCAF4	100	83.837	MGP_SPRETEiJ_G0021850	Scaf4	100	85.595	Mus_spretus
ENSMMUG00000001712	SCAF4	100	92.394	ENSMPUG00000001078	SCAF4	100	92.241	Mustela_putorius_furo
ENSMMUG00000001712	SCAF4	99	77.352	ENSMLUG00000011472	SCAF4	79	83.207	Myotis_lucifugus
ENSMMUG00000001712	SCAF4	99	90.157	ENSNGAG00000005214	Scaf4	99	90.174	Nannospalax_galili
ENSMMUG00000001712	SCAF4	100	98.009	ENSNLEG00000003569	SCAF4	100	98.009	Nomascus_leucogenys
ENSMMUG00000001712	SCAF4	94	90.769	ENSOPRG00000007016	SCAF4	77	90.217	Ochotona_princeps
ENSMMUG00000001712	SCAF4	100	88.370	ENSODEG00000002718	SCAF4	100	88.285	Octodon_degus
ENSMMUG00000001712	SCAF4	70	58.718	ENSONIG00000004687	scaf4a	51	73.780	Oreochromis_niloticus
ENSMMUG00000001712	SCAF4	100	88.707	ENSOCUG00000008336	SCAF4	100	88.707	Oryctolagus_cuniculus
ENSMMUG00000001712	SCAF4	51	57.480	ENSORLG00000003420	scaf4b	67	58.650	Oryzias_latipes
ENSMMUG00000001712	SCAF4	99	93.883	ENSOGAG00000014653	SCAF4	94	94.507	Otolemur_garnettii
ENSMMUG00000001712	SCAF4	99	90.009	ENSOARG00000013894	SCAF4	99	90.250	Ovis_aries
ENSMMUG00000001712	SCAF4	100	98.182	ENSPPAG00000028535	SCAF4	100	98.182	Pan_paniscus
ENSMMUG00000001712	SCAF4	99	91.986	ENSPPRG00000000635	SCAF4	100	92.334	Panthera_pardus
ENSMMUG00000001712	SCAF4	99	89.782	ENSPTIG00000021578	SCAF4	99	88.077	Panthera_tigris_altaica
ENSMMUG00000001712	SCAF4	100	98.182	ENSPTRG00000013848	SCAF4	100	98.182	Pan_troglodytes
ENSMMUG00000001712	SCAF4	100	99.394	ENSPANG00000017332	SCAF4	100	99.394	Papio_anubis
ENSMMUG00000001712	SCAF4	64	64.248	ENSPKIG00000022408	scaf4a	90	66.667	Paramormyrops_kingsleyae
ENSMMUG00000001712	SCAF4	100	76.384	ENSPSIG00000014242	SCAF4	58	84.049	Pelodiscus_sinensis
ENSMMUG00000001712	SCAF4	60	87.231	ENSPCIG00000028183	SCAF4	91	81.310	Phascolarctos_cinereus
ENSMMUG00000001712	SCAF4	100	98.355	ENSPPYG00000011355	SCAF4	100	98.355	Pongo_abelii
ENSMMUG00000001712	SCAF4	100	95.844	ENSPCOG00000018710	SCAF4	100	95.584	Propithecus_coquereli
ENSMMUG00000001712	SCAF4	100	91.342	ENSPVAG00000005220	SCAF4	100	92.035	Pteropus_vampyrus
ENSMMUG00000001712	SCAF4	76	57.480	ENSPNAG00000016892	scaf4a	60	63.323	Pygocentrus_nattereri
ENSMMUG00000001712	SCAF4	98	85.600	ENSRNOG00000002104	Scaf4	98	85.897	Rattus_norvegicus
ENSMMUG00000001712	SCAF4	99	96.245	ENSRBIG00000040007	SCAF4	99	96.245	Rhinopithecus_bieti
ENSMMUG00000001712	SCAF4	100	98.615	ENSRROG00000029488	SCAF4	100	98.615	Rhinopithecus_roxellana
ENSMMUG00000001712	SCAF4	100	83.868	ENSSHAG00000001581	SCAF4	100	82.439	Sarcophilus_harrisii
ENSMMUG00000001712	SCAF4	66	53.291	ENSSFOG00015006338	scaf4a	54	57.856	Scleropages_formosus
ENSMMUG00000001712	SCAF4	65	56.690	ENSSMAG00000003738	scaf4b	54	71.519	Scophthalmus_maximus
ENSMMUG00000001712	SCAF4	79	53.568	ENSSMAG00000017901	scaf4a	53	53.461	Scophthalmus_maximus
ENSMMUG00000001712	SCAF4	57	61.290	ENSSDUG00000012380	scaf4b	54	70.886	Seriola_dumerili
ENSMMUG00000001712	SCAF4	57	61.290	ENSSLDG00000023152	-	54	70.886	Seriola_lalandi_dorsalis
ENSMMUG00000001712	SCAF4	100	89.437	ENSSARG00000009994	SCAF4	100	89.264	Sorex_araneus
ENSMMUG00000001712	SCAF4	100	90.292	ENSSSCG00000021023	SCAF4	100	90.206	Sus_scrofa
ENSMMUG00000001712	SCAF4	74	72.138	ENSTGUG00000013464	SCAF4	61	76.359	Taeniopygia_guttata
ENSMMUG00000001712	SCAF4	50	58.451	ENSTRUG00000009536	-	58	68.485	Takifugu_rubripes
ENSMMUG00000001712	SCAF4	99	91.528	ENSTTRG00000010963	SCAF4	100	91.528	Tursiops_truncatus
ENSMMUG00000001712	SCAF4	100	90.649	ENSUAMG00000008860	SCAF4	100	90.563	Ursus_americanus
ENSMMUG00000001712	SCAF4	99	90.535	ENSUMAG00000016962	SCAF4	100	91.148	Ursus_maritimus
ENSMMUG00000001712	SCAF4	99	92.726	ENSVVUG00000002953	SCAF4	100	92.813	Vulpes_vulpes
ENSMMUG00000001712	SCAF4	99	55.931	ENSXETG00000007351	scaf4	76	66.476	Xenopus_tropicalis