EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000002265 (Gene tree)
Gene ID: 709717
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 35455 bases
Position: chr5:65983535-66018989
Accession: 709717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000055664	YTH	PF04146.15	9.7e-40	1	1
ENSMMUP00000003026	YTH	PF04146.15	1.6e-39	1	1
ENSMMUP00000003025	YTH	PF04146.15	1.6e-39	1	1
ENSMMUP00000050357	YTH	PF04146.15	1.6e-39	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000073543	YTHDC1-202	1602	-	ENSMMUP00000055664	533 (aa)	-	A0A1D5R5S6
ENSMMUT00000003206	YTHDC1-204	2109	-	ENSMMUP00000003026	702 (aa)	-	F7BA90
ENSMMUT00000074592	YTHDC1-203	2187	-	ENSMMUP00000050357	728 (aa)	-	A0A1D5QQM9
ENSMMUT00000003205	YTHDC1-201	2588	XM_001098270	ENSMMUP00000003025	728 (aa)	XP_001098270	F7BAA1

Gene Model

Click here to download ENSMMUG00000002265's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000002265's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000002265	YTHDC1	100	99.725	ENSG00000083896	YTHDC1	100	100.000	Homo_sapiens
ENSMMUG00000002265	YTHDC1	58	59.102	ENSAPOG00000013997	ythdc1	57	62.768	Acanthochromis_polyacanthus
ENSMMUG00000002265	YTHDC1	100	97.674	ENSAMEG00000005688	YTHDC1	100	97.674	Ailuropoda_melanoleuca
ENSMMUG00000002265	YTHDC1	62	70.638	ENSACIG00000019728	ythdc1	80	60.048	Amphilophus_citrinellus
ENSMMUG00000002265	YTHDC1	57	61.468	ENSAOCG00000000239	ythdc1	59	67.703	Amphiprion_ocellaris
ENSMMUG00000002265	YTHDC1	50	64.420	ENSAPEG00000000618	ythdc1	53	68.946	Amphiprion_percula
ENSMMUG00000002265	YTHDC1	91	85.113	ENSAPLG00000009921	YTHDC1	60	96.659	Anas_platyrhynchos
ENSMMUG00000002265	YTHDC1	93	83.704	ENSACAG00000009697	YTHDC1	93	83.556	Anolis_carolinensis
ENSMMUG00000002265	YTHDC1	100	99.313	ENSANAG00000001522	YTHDC1	100	99.313	Aotus_nancymaae
ENSMMUG00000002265	YTHDC1	58	59.234	ENSACLG00000019371	ythdc1	59	66.362	Astatotilapia_calliptera
ENSMMUG00000002265	YTHDC1	93	64.409	ENSAMXG00000006978	ythdc1	92	65.896	Astyanax_mexicanus
ENSMMUG00000002265	YTHDC1	100	97.531	ENSBTAG00000015572	YTHDC1	100	97.531	Bos_taurus
ENSMMUG00000002265	YTHDC1	100	99.725	ENSCJAG00000009934	YTHDC1	100	99.725	Callithrix_jacchus
ENSMMUG00000002265	YTHDC1	100	97.674	ENSCAFG00000002821	YTHDC1	100	97.674	Canis_familiaris
ENSMMUG00000002265	YTHDC1	100	97.674	ENSCAFG00020027112	YTHDC1	100	97.674	Canis_lupus_dingo
ENSMMUG00000002265	YTHDC1	99	91.059	ENSCHIG00000004810	YTHDC1	98	91.059	Capra_hircus
ENSMMUG00000002265	YTHDC1	100	99.038	ENSTSYG00000011668	YTHDC1	100	99.038	Carlito_syrichta
ENSMMUG00000002265	YTHDC1	97	75.581	ENSCAPG00000008722	YTHDC1	90	69.243	Cavia_aperea
ENSMMUG00000002265	YTHDC1	95	97.047	ENSCPOG00000010929	YTHDC1	100	91.209	Cavia_porcellus
ENSMMUG00000002265	YTHDC1	100	99.451	ENSCCAG00000035754	YTHDC1	100	99.451	Cebus_capucinus
ENSMMUG00000002265	YTHDC1	100	99.863	ENSCATG00000036320	YTHDC1	99	99.863	Cercocebus_atys
ENSMMUG00000002265	YTHDC1	99	97.796	ENSCLAG00000005482	YTHDC1	99	97.796	Chinchilla_lanigera
ENSMMUG00000002265	YTHDC1	100	99.863	ENSCSAG00000005252	YTHDC1	100	99.863	Chlorocebus_sabaeus
ENSMMUG00000002265	YTHDC1	92	86.607	ENSCPBG00000021965	YTHDC1	94	87.211	Chrysemys_picta_bellii
ENSMMUG00000002265	YTHDC1	100	100.000	ENSCANG00000004769	YTHDC1	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000002265	YTHDC1	100	97.253	ENSCGRG00001000816	Ythdc1	100	96.332	Cricetulus_griseus_chok1gshd
ENSMMUG00000002265	YTHDC1	99	97.357	ENSCGRG00000009807	Ythdc1	99	97.357	Cricetulus_griseus_crigri
ENSMMUG00000002265	YTHDC1	57	60.352	ENSCSEG00000020404	ythdc1	59	66.906	Cynoglossus_semilaevis
ENSMMUG00000002265	YTHDC1	57	59.424	ENSCVAG00000022349	ythdc1	59	65.783	Cyprinodon_variegatus
ENSMMUG00000002265	YTHDC1	93	63.557	ENSDARG00000051953	ythdc1	58	78.378	Danio_rerio
ENSMMUG00000002265	YTHDC1	100	96.845	ENSDNOG00000004949	YTHDC1	100	96.845	Dasypus_novemcinctus
ENSMMUG00000002265	YTHDC1	99	98.626	ENSDORG00000013045	Ythdc1	100	98.609	Dipodomys_ordii
ENSMMUG00000002265	YTHDC1	78	100.000	ENSETEG00000001878	YTHDC1	77	100.000	Echinops_telfairi
ENSMMUG00000002265	YTHDC1	100	98.222	ENSEASG00005018383	YTHDC1	100	98.222	Equus_asinus_asinus
ENSMMUG00000002265	YTHDC1	100	97.811	ENSECAG00000018303	YTHDC1	100	97.811	Equus_caballus
ENSMMUG00000002265	YTHDC1	100	96.845	ENSEEUG00000015466	YTHDC1	100	96.845	Erinaceus_europaeus
ENSMMUG00000002265	YTHDC1	94	60.895	ENSELUG00000014029	ythdc1	57	77.179	Esox_lucius
ENSMMUG00000002265	YTHDC1	100	97.534	ENSFCAG00000026791	YTHDC1	100	97.534	Felis_catus
ENSMMUG00000002265	YTHDC1	68	89.679	ENSFALG00000006581	YTHDC1	87	93.917	Ficedula_albicollis
ENSMMUG00000002265	YTHDC1	99	97.772	ENSFDAG00000018560	YTHDC1	100	97.772	Fukomys_damarensis
ENSMMUG00000002265	YTHDC1	65	66.667	ENSFHEG00000001286	ythdc1	60	56.325	Fundulus_heteroclitus
ENSMMUG00000002265	YTHDC1	60	67.364	ENSGMOG00000018815	ythdc1	78	64.184	Gadus_morhua
ENSMMUG00000002265	YTHDC1	97	81.818	ENSGALG00000035906	YTHDC1	85	83.308	Gallus_gallus
ENSMMUG00000002265	YTHDC1	67	65.799	ENSGAFG00000001759	ythdc1	54	67.391	Gambusia_affinis
ENSMMUG00000002265	YTHDC1	58	62.326	ENSGACG00000015486	ythdc1	57	62.774	Gasterosteus_aculeatus
ENSMMUG00000002265	YTHDC1	92	87.240	ENSGAGG00000007108	YTHDC1	92	87.240	Gopherus_agassizii
ENSMMUG00000002265	YTHDC1	100	99.863	ENSGGOG00000021958	YTHDC1	100	99.863	Gorilla_gorilla
ENSMMUG00000002265	YTHDC1	57	59.633	ENSHBUG00000019288	ythdc1	59	66.362	Haplochromis_burtoni
ENSMMUG00000002265	YTHDC1	95	70.682	ENSHGLG00000003239	-	57	78.947	Heterocephalus_glaber_female
ENSMMUG00000002265	YTHDC1	100	97.390	ENSHGLG00000006319	-	100	96.467	Heterocephalus_glaber_female
ENSMMUG00000002265	YTHDC1	95	69.220	ENSHGLG00100008060	-	57	76.485	Heterocephalus_glaber_male
ENSMMUG00000002265	YTHDC1	100	96.585	ENSHGLG00100001556	-	100	96.585	Heterocephalus_glaber_male
ENSMMUG00000002265	YTHDC1	53	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSMMUG00000002265	YTHDC1	93	67.442	ENSIPUG00000018136	ythdc1	61	83.759	Ictalurus_punctatus
ENSMMUG00000002265	YTHDC1	100	99.038	ENSSTOG00000013652	YTHDC1	100	98.098	Ictidomys_tridecemlineatus
ENSMMUG00000002265	YTHDC1	95	90.533	ENSJJAG00000010268	Ythdc1	92	93.304	Jaculus_jaculus
ENSMMUG00000002265	YTHDC1	57	60.502	ENSKMAG00000006483	ythdc1	85	65.533	Kryptolebias_marmoratus
ENSMMUG00000002265	YTHDC1	64	63.462	ENSLBEG00000020831	ythdc1	72	75.000	Labrus_bergylta
ENSMMUG00000002265	YTHDC1	88	73.065	ENSLACG00000004893	YTHDC1	92	73.906	Latimeria_chalumnae
ENSMMUG00000002265	YTHDC1	93	73.560	ENSLOCG00000003045	ythdc1	92	88.702	Lepisosteus_oculatus
ENSMMUG00000002265	YTHDC1	100	96.841	ENSLAFG00000021592	YTHDC1	100	95.924	Loxodonta_africana
ENSMMUG00000002265	YTHDC1	100	99.863	ENSMFAG00000031927	YTHDC1	99	100.000	Macaca_fascicularis
ENSMMUG00000002265	YTHDC1	100	100.000	ENSMNEG00000033751	YTHDC1	100	100.000	Macaca_nemestrina
ENSMMUG00000002265	YTHDC1	100	99.863	ENSMLEG00000042147	YTHDC1	100	99.863	Mandrillus_leucophaeus
ENSMMUG00000002265	YTHDC1	56	61.871	ENSMAMG00000013122	ythdc1	58	66.826	Mastacembelus_armatus
ENSMMUG00000002265	YTHDC1	57	59.633	ENSMZEG00005023173	ythdc1	59	66.362	Maylandia_zebra
ENSMMUG00000002265	YTHDC1	93	84.444	ENSMGAG00000010391	YTHDC1	91	84.741	Meleagris_gallopavo
ENSMMUG00000002265	YTHDC1	100	96.978	ENSMAUG00000001286	Ythdc1	100	96.060	Mesocricetus_auratus
ENSMMUG00000002265	YTHDC1	100	98.217	ENSMICG00000034640	YTHDC1	100	97.286	Microcebus_murinus
ENSMMUG00000002265	YTHDC1	100	97.253	ENSMOCG00000020201	Ythdc1	99	97.383	Microtus_ochrogaster
ENSMMUG00000002265	YTHDC1	87	69.476	ENSMODG00000014337	-	95	69.830	Monodelphis_domestica
ENSMMUG00000002265	YTHDC1	93	89.763	ENSMODG00000020754	-	92	88.724	Monodelphis_domestica
ENSMMUG00000002265	YTHDC1	96	51.783	ENSMODG00000010076	-	60	61.538	Monodelphis_domestica
ENSMMUG00000002265	YTHDC1	66	56.904	ENSMODG00000009173	-	88	61.594	Monodelphis_domestica
ENSMMUG00000002265	YTHDC1	58	68.627	ENSMALG00000013412	ythdc1	56	68.857	Monopterus_albus
ENSMMUG00000002265	YTHDC1	98	94.667	MGP_CAROLIEiJ_G0027347	Ythdc1	96	94.667	Mus_caroli
ENSMMUG00000002265	YTHDC1	100	97.119	ENSMUSG00000035851	Ythdc1	100	97.119	Mus_musculus
ENSMMUG00000002265	YTHDC1	100	97.394	MGP_PahariEiJ_G0017126	Ythdc1	100	97.394	Mus_pahari
ENSMMUG00000002265	YTHDC1	100	97.394	MGP_SPRETEiJ_G0028339	Ythdc1	100	97.394	Mus_spretus
ENSMMUG00000002265	YTHDC1	93	73.167	ENSMPUG00000001743	YTHDC1	53	98.695	Mustela_putorius_furo
ENSMMUG00000002265	YTHDC1	99	97.354	ENSMLUG00000016300	YTHDC1	100	97.354	Myotis_lucifugus
ENSMMUG00000002265	YTHDC1	79	96.682	ENSNGAG00000024000	Ythdc1	93	96.690	Nannospalax_galili
ENSMMUG00000002265	YTHDC1	60	63.889	ENSNBRG00000007663	ythdc1	70	66.589	Neolamprologus_brichardi
ENSMMUG00000002265	YTHDC1	99	99.174	ENSNLEG00000009202	YTHDC1	99	99.174	Nomascus_leucogenys
ENSMMUG00000002265	YTHDC1	83	81.940	ENSMEUG00000007128	YTHDC1	81	81.940	Notamacropus_eugenii
ENSMMUG00000002265	YTHDC1	76	98.867	ENSOPRG00000008986	YTHDC1	74	98.867	Ochotona_princeps
ENSMMUG00000002265	YTHDC1	100	97.253	ENSODEG00000001715	YTHDC1	100	97.253	Octodon_degus
ENSMMUG00000002265	YTHDC1	57	60.092	ENSONIG00000012651	ythdc1	59	66.819	Oreochromis_niloticus
ENSMMUG00000002265	YTHDC1	89	77.217	ENSOANG00000014398	YTHDC1	55	97.468	Ornithorhynchus_anatinus
ENSMMUG00000002265	YTHDC1	93	81.979	ENSOCUG00000015886	YTHDC1	57	95.729	Oryctolagus_cuniculus
ENSMMUG00000002265	YTHDC1	56	61.111	ENSORLG00000030544	ythdc1	60	66.988	Oryzias_latipes
ENSMMUG00000002265	YTHDC1	56	60.386	ENSORLG00020019316	ythdc1	60	66.988	Oryzias_latipes_hni
ENSMMUG00000002265	YTHDC1	56	61.520	ENSOMEG00000000551	ythdc1	60	65.526	Oryzias_melastigma
ENSMMUG00000002265	YTHDC1	100	97.802	ENSOGAG00000003362	YTHDC1	100	97.802	Otolemur_garnettii
ENSMMUG00000002265	YTHDC1	100	97.531	ENSOARG00000008633	YTHDC1	100	97.531	Ovis_aries
ENSMMUG00000002265	YTHDC1	100	99.725	ENSPPAG00000041315	YTHDC1	100	99.725	Pan_paniscus
ENSMMUG00000002265	YTHDC1	100	97.534	ENSPPRG00000011979	YTHDC1	100	96.612	Panthera_pardus
ENSMMUG00000002265	YTHDC1	99	97.390	ENSPTIG00000015527	YTHDC1	100	97.390	Panthera_tigris_altaica
ENSMMUG00000002265	YTHDC1	100	99.725	ENSPTRG00000016105	YTHDC1	100	99.725	Pan_troglodytes
ENSMMUG00000002265	YTHDC1	100	99.863	ENSPANG00000021590	YTHDC1	99	100.000	Papio_anubis
ENSMMUG00000002265	YTHDC1	93	69.432	ENSPKIG00000018497	ythdc1	93	68.940	Paramormyrops_kingsleyae
ENSMMUG00000002265	YTHDC1	91	86.937	ENSPSIG00000002782	YTHDC1	92	86.937	Pelodiscus_sinensis
ENSMMUG00000002265	YTHDC1	56	66.942	ENSPMGG00000000970	-	72	63.934	Periophthalmus_magnuspinnatus
ENSMMUG00000002265	YTHDC1	99	97.658	ENSPEMG00000013850	Ythdc1	100	97.632	Peromyscus_maniculatus_bairdii
ENSMMUG00000002265	YTHDC1	93	89.614	ENSPCIG00000006870	YTHDC1	92	88.576	Phascolarctos_cinereus
ENSMMUG00000002265	YTHDC1	57	59.545	ENSPLAG00000011079	ythdc1	85	65.625	Poecilia_latipinna
ENSMMUG00000002265	YTHDC1	70	59.135	ENSPREG00000016973	ythdc1	59	60.050	Poecilia_reticulata
ENSMMUG00000002265	YTHDC1	87	99.684	ENSPPYG00000014726	YTHDC1	100	99.684	Pongo_abelii
ENSMMUG00000002265	YTHDC1	75	100.000	ENSPCAG00000009607	YTHDC1	77	93.586	Procavia_capensis
ENSMMUG00000002265	YTHDC1	100	93.690	ENSPCOG00000019105	YTHDC1	100	92.809	Propithecus_coquereli
ENSMMUG00000002265	YTHDC1	93	92.319	ENSPVAG00000015551	YTHDC1	93	92.910	Pteropus_vampyrus
ENSMMUG00000002265	YTHDC1	58	59.234	ENSPNYG00000011687	ythdc1	59	66.362	Pundamilia_nyererei
ENSMMUG00000002265	YTHDC1	93	69.420	ENSPNAG00000028365	ythdc1	93	69.509	Pygocentrus_nattereri
ENSMMUG00000002265	YTHDC1	100	96.306	ENSRNOG00000001996	Ythdc1	100	95.399	Rattus_norvegicus
ENSMMUG00000002265	YTHDC1	99	98.898	ENSRBIG00000028279	YTHDC1	99	98.898	Rhinopithecus_bieti
ENSMMUG00000002265	YTHDC1	100	100.000	ENSRROG00000035028	YTHDC1	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000002265	YTHDC1	100	99.588	ENSSBOG00000022353	YTHDC1	99	99.725	Saimiri_boliviensis_boliviensis
ENSMMUG00000002265	YTHDC1	93	88.576	ENSSHAG00000002538	YTHDC1	91	88.571	Sarcophilus_harrisii
ENSMMUG00000002265	YTHDC1	93	68.169	ENSSFOG00015003298	ythdc1	60	86.019	Scleropages_formosus
ENSMMUG00000002265	YTHDC1	58	59.251	ENSSMAG00000009086	ythdc1	60	65.947	Scophthalmus_maximus
ENSMMUG00000002265	YTHDC1	56	61.017	ENSSDUG00000022008	ythdc1	59	67.277	Seriola_dumerili
ENSMMUG00000002265	YTHDC1	56	61.017	ENSSLDG00000007926	ythdc1	59	67.277	Seriola_lalandi_dorsalis
ENSMMUG00000002265	YTHDC1	79	98.616	ENSSARG00000010960	YTHDC1	100	98.616	Sorex_araneus
ENSMMUG00000002265	YTHDC1	93	82.891	ENSSPUG00000009357	YTHDC1	91	83.742	Sphenodon_punctatus
ENSMMUG00000002265	YTHDC1	58	61.261	ENSSPAG00000011449	ythdc1	59	67.703	Stegastes_partitus
ENSMMUG00000002265	YTHDC1	100	96.862	ENSSSCG00000035505	YTHDC1	100	96.812	Sus_scrofa
ENSMMUG00000002265	YTHDC1	93	86.370	ENSTGUG00000004452	-	92	85.926	Taeniopygia_guttata
ENSMMUG00000002265	YTHDC1	63	69.231	ENSTRUG00000010142	ythdc1	69	70.000	Takifugu_rubripes
ENSMMUG00000002265	YTHDC1	86	61.842	ENSTNIG00000013243	ythdc1	89	66.279	Tetraodon_nigroviridis
ENSMMUG00000002265	YTHDC1	93	87.240	ENSTBEG00000011546	YTHDC1	92	87.834	Tupaia_belangeri
ENSMMUG00000002265	YTHDC1	100	96.717	ENSTTRG00000005083	YTHDC1	100	96.717	Tursiops_truncatus
ENSMMUG00000002265	YTHDC1	94	97.579	ENSUAMG00000010388	YTHDC1	100	97.644	Ursus_americanus
ENSMMUG00000002265	YTHDC1	99	84.006	ENSUMAG00000013668	YTHDC1	98	84.006	Ursus_maritimus
ENSMMUG00000002265	YTHDC1	100	97.721	ENSVPAG00000009040	YTHDC1	99	97.721	Vicugna_pacos
ENSMMUG00000002265	YTHDC1	99	97.668	ENSVVUG00000005387	YTHDC1	100	97.500	Vulpes_vulpes
ENSMMUG00000002265	YTHDC1	92	74.184	ENSXETG00000017960	ythdc1	91	72.546	Xenopus_tropicalis
ENSMMUG00000002265	YTHDC1	69	53.261	ENSXCOG00000000530	ythdc1	88	54.348	Xiphophorus_couchianus
ENSMMUG00000002265	YTHDC1	58	58.482	ENSXMAG00000005196	ythdc1	61	65.138	Xiphophorus_maculatus