EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000002691 (Gene tree)
Gene ID: 694253
Gene Symbol: DDB1
Alias: -
Full Name: damage specific DNA binding protein 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 40134 bases
Position: chr14:12864329-12904462
Accession: 694253
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000003622	CPSF_A	PF03178.15	8.4e-86	1	1
ENSMMUP00000060495	CPSF_A	PF03178.15	4.5e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000056826	DDB1-202	486	-	ENSMMUP00000060495	162 (aa)	-	A0A1D5RJK1
ENSMMUT00000003832	DDB1-201	8149	XM_015114008	ENSMMUP00000003622	1132 (aa)	XP_014969494	F7HN48

Gene Model

Click here to download ENSMMUG00000002691's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03420	Nucleotide excision repair	KEGG
mcc04120	Ubiquitin mediated proteolysis	KEGG
mcc05161	Hepatitis B	KEGG
mcc05170	Human immunodeficiency virus 1 infection	KEGG
mcc05203	Viral carcinogenesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000002691's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000002691	DDB1	100	100.000	ENSG00000167986	DDB1	100	100.000	Homo_sapiens
ENSMMUG00000002691	DDB1	100	90.789	ENSAPOG00000005036	ddb1	99	91.429	Acanthochromis_polyacanthus
ENSMMUG00000002691	DDB1	99	99.912	ENSAMEG00000016518	DDB1	99	99.912	Ailuropoda_melanoleuca
ENSMMUG00000002691	DDB1	100	89.474	ENSACIG00000020624	ddb1	99	91.735	Amphilophus_citrinellus
ENSMMUG00000002691	DDB1	100	90.789	ENSAOCG00000003066	ddb1	99	91.070	Amphiprion_ocellaris
ENSMMUG00000002691	DDB1	100	90.789	ENSAPEG00000000092	ddb1	99	91.426	Amphiprion_percula
ENSMMUG00000002691	DDB1	100	89.474	ENSATEG00000020571	ddb1	97	91.628	Anabas_testudineus
ENSMMUG00000002691	DDB1	98	96.505	ENSAPLG00000007174	DDB1	98	96.505	Anas_platyrhynchos
ENSMMUG00000002691	DDB1	99	96.994	ENSACAG00000017758	DDB1	99	96.994	Anolis_carolinensis
ENSMMUG00000002691	DDB1	99	100.000	ENSANAG00000021878	DDB1	99	100.000	Aotus_nancymaae
ENSMMUG00000002691	DDB1	99	91.424	ENSACLG00000012401	ddb1	99	91.424	Astatotilapia_calliptera
ENSMMUG00000002691	DDB1	99	99.735	ENSBTAG00000021569	DDB1	92	99.735	Bos_taurus
ENSMMUG00000002691	DDB1	100	41.053	WBGene00010890	ddb-1	98	37.303	Caenorhabditis_elegans
ENSMMUG00000002691	DDB1	99	100.000	ENSCJAG00000019319	DDB1	99	100.000	Callithrix_jacchus
ENSMMUG00000002691	DDB1	99	99.912	ENSCAFG00000016264	DDB1	99	99.912	Canis_familiaris
ENSMMUG00000002691	DDB1	95	99.628	ENSCAFG00020012722	DDB1	99	99.628	Canis_lupus_dingo
ENSMMUG00000002691	DDB1	99	99.735	ENSCHIG00000014969	DDB1	99	99.735	Capra_hircus
ENSMMUG00000002691	DDB1	100	98.936	ENSTSYG00000008027	DDB1	99	99.116	Carlito_syrichta
ENSMMUG00000002691	DDB1	98	99.099	ENSCAPG00000010786	DDB1	99	99.099	Cavia_aperea
ENSMMUG00000002691	DDB1	100	98.592	ENSCPOG00000009956	DDB1	99	99.116	Cavia_porcellus
ENSMMUG00000002691	DDB1	99	100.000	ENSCCAG00000035883	DDB1	99	100.000	Cebus_capucinus
ENSMMUG00000002691	DDB1	100	96.875	ENSCATG00000044495	DDB1	99	97.463	Cercocebus_atys
ENSMMUG00000002691	DDB1	99	99.204	ENSCLAG00000004126	DDB1	99	99.204	Chinchilla_lanigera
ENSMMUG00000002691	DDB1	99	100.000	ENSCSAG00000006392	DDB1	99	100.000	Chlorocebus_sabaeus
ENSMMUG00000002691	DDB1	100	97.849	ENSCHOG00000011377	DDB1	90	92.803	Choloepus_hoffmanni
ENSMMUG00000002691	DDB1	99	97.701	ENSCPBG00000017728	DDB1	99	97.701	Chrysemys_picta_bellii
ENSMMUG00000002691	DDB1	100	67.606	ENSCING00000007437	-	99	61.888	Ciona_intestinalis
ENSMMUG00000002691	DDB1	94	60.260	ENSCSAVG00000004783	-	100	60.048	Ciona_savignyi
ENSMMUG00000002691	DDB1	99	100.000	ENSCANG00000019948	DDB1	99	100.000	Colobus_angolensis_palliatus
ENSMMUG00000002691	DDB1	99	99.823	ENSCGRG00001016599	Ddb1	99	99.823	Cricetulus_griseus_chok1gshd
ENSMMUG00000002691	DDB1	99	99.823	ENSCGRG00000013427	Ddb1	99	99.823	Cricetulus_griseus_crigri
ENSMMUG00000002691	DDB1	100	93.056	ENSCSEG00000012499	ddb1	99	89.575	Cynoglossus_semilaevis
ENSMMUG00000002691	DDB1	100	90.789	ENSCVAG00000019531	ddb1	99	91.333	Cyprinodon_variegatus
ENSMMUG00000002691	DDB1	100	89.474	ENSDARG00000074431	ddb1	99	88.380	Danio_rerio
ENSMMUG00000002691	DDB1	95	99.256	ENSDNOG00000014884	DDB1	97	99.256	Dasypus_novemcinctus
ENSMMUG00000002691	DDB1	100	98.936	ENSDORG00000000127	Ddb1	99	100.000	Dipodomys_ordii
ENSMMUG00000002691	DDB1	99	61.004	FBgn0260962	pic	99	60.793	Drosophila_melanogaster
ENSMMUG00000002691	DDB1	100	98.913	ENSETEG00000001053	-	70	100.000	Echinops_telfairi
ENSMMUG00000002691	DDB1	98	87.324	ENSEBUG00000014593	ddb1	97	84.927	Eptatretus_burgeri
ENSMMUG00000002691	DDB1	99	99.735	ENSEASG00005008184	DDB1	99	99.735	Equus_asinus_asinus
ENSMMUG00000002691	DDB1	99	99.646	ENSECAG00000012136	DDB1	99	99.646	Equus_caballus
ENSMMUG00000002691	DDB1	86	97.475	ENSEEUG00000003194	DDB1	85	97.475	Erinaceus_europaeus
ENSMMUG00000002691	DDB1	99	91.158	ENSELUG00000023868	ddb1	99	91.158	Esox_lucius
ENSMMUG00000002691	DDB1	99	99.912	ENSFCAG00000029716	DDB1	99	99.912	Felis_catus
ENSMMUG00000002691	DDB1	99	96.914	ENSFALG00000011981	DDB1	99	96.914	Ficedula_albicollis
ENSMMUG00000002691	DDB1	99	99.116	ENSFDAG00000005128	DDB1	99	99.116	Fukomys_damarensis
ENSMMUG00000002691	DDB1	90	90.650	ENSFHEG00000022133	ddb1	97	90.650	Fundulus_heteroclitus
ENSMMUG00000002691	DDB1	79	94.649	ENSGMOG00000019386	ddb1	94	94.649	Gadus_morhua
ENSMMUG00000002691	DDB1	99	97.082	ENSGALG00000042333	DDB1	99	97.082	Gallus_gallus
ENSMMUG00000002691	DDB1	100	90.789	ENSGAFG00000013142	ddb1	99	91.146	Gambusia_affinis
ENSMMUG00000002691	DDB1	100	90.789	ENSGACG00000017182	ddb1	100	90.559	Gasterosteus_aculeatus
ENSMMUG00000002691	DDB1	95	97.767	ENSGAGG00000014124	DDB1	99	97.767	Gopherus_agassizii
ENSMMUG00000002691	DDB1	99	100.000	ENSGGOG00000004052	DDB1	99	100.000	Gorilla_gorilla
ENSMMUG00000002691	DDB1	99	91.424	ENSHBUG00000008873	ddb1	99	91.424	Haplochromis_burtoni
ENSMMUG00000002691	DDB1	99	99.027	ENSHGLG00000018430	DDB1	99	99.027	Heterocephalus_glaber_female
ENSMMUG00000002691	DDB1	99	97.966	ENSHGLG00100014475	DDB1	99	97.966	Heterocephalus_glaber_male
ENSMMUG00000002691	DDB1	100	95.775	ENSHCOG00000018670	ddb1	98	90.892	Hippocampus_comes
ENSMMUG00000002691	DDB1	100	89.474	ENSIPUG00000005612	DDB1	99	90.451	Ictalurus_punctatus
ENSMMUG00000002691	DDB1	99	99.823	ENSSTOG00000007552	DDB1	99	99.823	Ictidomys_tridecemlineatus
ENSMMUG00000002691	DDB1	99	99.646	ENSJJAG00000017769	Ddb1	99	99.646	Jaculus_jaculus
ENSMMUG00000002691	DDB1	100	90.789	ENSKMAG00000002315	ddb1	99	91.333	Kryptolebias_marmoratus
ENSMMUG00000002691	DDB1	91	86.885	ENSLBEG00000017065	ddb1	99	91.399	Labrus_bergylta
ENSMMUG00000002691	DDB1	99	93.557	ENSLACG00000017611	DDB1	99	93.557	Latimeria_chalumnae
ENSMMUG00000002691	DDB1	100	89.474	ENSLOCG00000000012	ddb1	99	83.333	Lepisosteus_oculatus
ENSMMUG00000002691	DDB1	99	99.646	ENSLAFG00000011513	DDB1	99	99.646	Loxodonta_africana
ENSMMUG00000002691	DDB1	99	100.000	ENSMFAG00000042035	DDB1	99	100.000	Macaca_fascicularis
ENSMMUG00000002691	DDB1	99	100.000	ENSMNEG00000031559	DDB1	99	100.000	Macaca_nemestrina
ENSMMUG00000002691	DDB1	99	100.000	ENSMLEG00000044136	DDB1	99	100.000	Mandrillus_leucophaeus
ENSMMUG00000002691	DDB1	100	90.789	ENSMAMG00000014372	ddb1	99	91.424	Mastacembelus_armatus
ENSMMUG00000002691	DDB1	99	91.335	ENSMZEG00005013835	ddb1	99	91.335	Maylandia_zebra
ENSMMUG00000002691	DDB1	94	96.432	ENSMGAG00000004990	DDB1	99	96.432	Meleagris_gallopavo
ENSMMUG00000002691	DDB1	99	99.823	ENSMAUG00000012926	Ddb1	99	99.823	Mesocricetus_auratus
ENSMMUG00000002691	DDB1	99	99.823	ENSMICG00000013703	DDB1	99	99.823	Microcebus_murinus
ENSMMUG00000002691	DDB1	99	99.558	ENSMOCG00000020499	Ddb1	99	99.558	Microtus_ochrogaster
ENSMMUG00000002691	DDB1	100	90.789	ENSMMOG00000001758	ddb1	99	91.735	Mola_mola
ENSMMUG00000002691	DDB1	100	100.000	ENSMODG00000020353	DDB1	99	89.102	Monodelphis_domestica
ENSMMUG00000002691	DDB1	100	90.789	ENSMALG00000014071	ddb1	99	91.424	Monopterus_albus
ENSMMUG00000002691	DDB1	99	99.735	MGP_CAROLIEiJ_G0022695	Ddb1	99	99.735	Mus_caroli
ENSMMUG00000002691	DDB1	99	99.646	ENSMUSG00000024740	Ddb1	99	99.646	Mus_musculus
ENSMMUG00000002691	DDB1	99	99.735	MGP_PahariEiJ_G0014189	Ddb1	99	99.735	Mus_pahari
ENSMMUG00000002691	DDB1	99	99.735	MGP_SPRETEiJ_G0023609	Ddb1	99	99.735	Mus_spretus
ENSMMUG00000002691	DDB1	99	96.552	ENSMPUG00000014200	DDB1	99	96.552	Mustela_putorius_furo
ENSMMUG00000002691	DDB1	99	99.293	ENSMLUG00000013232	DDB1	99	99.293	Myotis_lucifugus
ENSMMUG00000002691	DDB1	99	99.381	ENSNGAG00000009384	Ddb1	99	99.381	Nannospalax_galili
ENSMMUG00000002691	DDB1	99	91.512	ENSNBRG00000019581	ddb1	99	91.512	Neolamprologus_brichardi
ENSMMUG00000002691	DDB1	99	96.850	ENSNLEG00000002022	DDB1	99	96.850	Nomascus_leucogenys
ENSMMUG00000002691	DDB1	91	99.636	ENSMEUG00000001099	DDB1	92	99.636	Notamacropus_eugenii
ENSMMUG00000002691	DDB1	90	90.900	ENSOPRG00000008254	DDB1	90	90.900	Ochotona_princeps
ENSMMUG00000002691	DDB1	99	99.027	ENSODEG00000002419	DDB1	99	99.027	Octodon_degus
ENSMMUG00000002691	DDB1	99	91.424	ENSONIG00000005804	ddb1	99	91.424	Oreochromis_niloticus
ENSMMUG00000002691	DDB1	90	98.143	ENSOANG00000004897	DDB1	99	98.143	Ornithorhynchus_anatinus
ENSMMUG00000002691	DDB1	99	99.823	ENSOCUG00000001667	DDB1	99	99.823	Oryctolagus_cuniculus
ENSMMUG00000002691	DDB1	100	94.286	ENSORLG00000001399	ddb1	98	91.066	Oryzias_latipes
ENSMMUG00000002691	DDB1	100	94.286	ENSORLG00020001277	ddb1	97	89.734	Oryzias_latipes_hni
ENSMMUG00000002691	DDB1	100	94.286	ENSORLG00015002080	ddb1	99	90.884	Oryzias_latipes_hsok
ENSMMUG00000002691	DDB1	100	88.158	ENSOMEG00000006181	ddb1	99	89.699	Oryzias_melastigma
ENSMMUG00000002691	DDB1	99	99.646	ENSOGAG00000016103	DDB1	99	99.646	Otolemur_garnettii
ENSMMUG00000002691	DDB1	99	99.733	ENSOARG00000011716	DDB1	98	99.733	Ovis_aries
ENSMMUG00000002691	DDB1	99	100.000	ENSPPAG00000035343	DDB1	99	100.000	Pan_paniscus
ENSMMUG00000002691	DDB1	99	99.912	ENSPPRG00000013300	DDB1	99	99.912	Panthera_pardus
ENSMMUG00000002691	DDB1	98	99.910	ENSPTIG00000006909	DDB1	97	99.910	Panthera_tigris_altaica
ENSMMUG00000002691	DDB1	99	100.000	ENSPTRG00000003737	DDB1	99	100.000	Pan_troglodytes
ENSMMUG00000002691	DDB1	99	100.000	ENSPANG00000000242	DDB1	99	100.000	Papio_anubis
ENSMMUG00000002691	DDB1	100	90.789	ENSPKIG00000019213	ddb1	94	91.240	Paramormyrops_kingsleyae
ENSMMUG00000002691	DDB1	98	97.040	ENSPSIG00000013275	DDB1	99	97.040	Pelodiscus_sinensis
ENSMMUG00000002691	DDB1	100	89.474	ENSPMGG00000021179	ddb1	99	91.429	Periophthalmus_magnuspinnatus
ENSMMUG00000002691	DDB1	99	99.823	ENSPEMG00000012241	Ddb1	99	99.823	Peromyscus_maniculatus_bairdii
ENSMMUG00000002691	DDB1	88	90.196	ENSPMAG00000008479	ddb1	100	86.739	Petromyzon_marinus
ENSMMUG00000002691	DDB1	99	98.939	ENSPCIG00000002643	DDB1	99	98.939	Phascolarctos_cinereus
ENSMMUG00000002691	DDB1	100	90.789	ENSPFOG00000002768	ddb1	99	90.813	Poecilia_formosa
ENSMMUG00000002691	DDB1	100	90.789	ENSPLAG00000017227	ddb1	99	90.628	Poecilia_latipinna
ENSMMUG00000002691	DDB1	100	90.789	ENSPMEG00000011398	ddb1	99	90.628	Poecilia_mexicana
ENSMMUG00000002691	DDB1	100	90.789	ENSPREG00000004440	ddb1	98	91.256	Poecilia_reticulata
ENSMMUG00000002691	DDB1	99	94.987	ENSPPYG00000003193	DDB1	99	94.987	Pongo_abelii
ENSMMUG00000002691	DDB1	100	94.000	ENSPCAG00000011040	DDB1	84	99.395	Procavia_capensis
ENSMMUG00000002691	DDB1	99	98.235	ENSPCOG00000015176	DDB1	99	98.235	Propithecus_coquereli
ENSMMUG00000002691	DDB1	99	99.735	ENSPVAG00000003847	DDB1	99	99.735	Pteropus_vampyrus
ENSMMUG00000002691	DDB1	57	88.172	ENSPNYG00000010482	ddb1	98	90.054	Pundamilia_nyererei
ENSMMUG00000002691	DDB1	100	90.789	ENSPNAG00000006635	ddb1	97	91.240	Pygocentrus_nattereri
ENSMMUG00000002691	DDB1	99	99.735	ENSRNOG00000020715	Ddb1	99	99.735	Rattus_norvegicus
ENSMMUG00000002691	DDB1	100	100.000	ENSRBIG00000033611	DDB1	100	100.000	Rhinopithecus_bieti
ENSMMUG00000002691	DDB1	99	100.000	ENSRROG00000041407	DDB1	99	100.000	Rhinopithecus_roxellana
ENSMMUG00000002691	DDB1	99	99.912	ENSSBOG00000019775	DDB1	99	99.912	Saimiri_boliviensis_boliviensis
ENSMMUG00000002691	DDB1	94	96.890	ENSSHAG00000011600	DDB1	99	96.890	Sarcophilus_harrisii
ENSMMUG00000002691	DDB1	100	95.775	ENSSFOG00015011151	ddb1	97	91.357	Scleropages_formosus
ENSMMUG00000002691	DDB1	100	90.789	ENSSMAG00000009495	ddb1	99	90.981	Scophthalmus_maximus
ENSMMUG00000002691	DDB1	100	90.789	ENSSDUG00000004642	ddb1	99	91.335	Seriola_dumerili
ENSMMUG00000002691	DDB1	100	90.789	ENSSLDG00000015804	ddb1	99	91.335	Seriola_lalandi_dorsalis
ENSMMUG00000002691	DDB1	70	100.000	ENSSARG00000003290	-	72	100.000	Sorex_araneus
ENSMMUG00000002691	DDB1	99	97.878	ENSSPUG00000019338	DDB1	99	97.878	Sphenodon_punctatus
ENSMMUG00000002691	DDB1	100	90.789	ENSSPAG00000009888	ddb1	99	91.535	Stegastes_partitus
ENSMMUG00000002691	DDB1	99	98.851	ENSSSCG00000013094	DDB1	99	98.851	Sus_scrofa
ENSMMUG00000002691	DDB1	99	97.082	ENSTGUG00000006414	DDB1	99	97.082	Taeniopygia_guttata
ENSMMUG00000002691	DDB1	100	90.789	ENSTRUG00000016682	ddb1	98	90.214	Takifugu_rubripes
ENSMMUG00000002691	DDB1	88	84.894	ENSTNIG00000009565	ddb1	99	84.894	Tetraodon_nigroviridis
ENSMMUG00000002691	DDB1	92	94.716	ENSTTRG00000011055	DDB1	93	94.716	Tursiops_truncatus
ENSMMUG00000002691	DDB1	95	99.628	ENSUAMG00000017793	DDB1	93	99.628	Ursus_americanus
ENSMMUG00000002691	DDB1	95	99.628	ENSUMAG00000011788	DDB1	98	99.628	Ursus_maritimus
ENSMMUG00000002691	DDB1	90	100.000	ENSVPAG00000007963	DDB1	91	100.000	Vicugna_pacos
ENSMMUG00000002691	DDB1	99	99.823	ENSVVUG00000004987	DDB1	99	99.823	Vulpes_vulpes
ENSMMUG00000002691	DDB1	99	93.128	ENSXETG00000008820	ddb1	99	93.128	Xenopus_tropicalis
ENSMMUG00000002691	DDB1	100	90.789	ENSXCOG00000013956	ddb1	99	91.224	Xiphophorus_couchianus
ENSMMUG00000002691	DDB1	100	90.789	ENSXMAG00000000022	ddb1	99	91.146	Xiphophorus_maculatus