EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000002939 (Gene tree)
Gene ID: 699717
Gene Symbol: CMSS1
Alias: C2H3orf26|C3orf26
Full Name: cms1 ribosomal small subunit homolog
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 374747 bases
Position: chr2:20720890-21095636
Accession: 699717
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000045919	CMS1	PF14617.6	1.3e-32	1	1
ENSMMUP00000003932	CMS1	PF14617.6	1.8e-32	1	1
ENSMMUP00000058030	CMS1	PF14617.6	2e-32	1	1
ENSMMUP00000042034	CMS1	PF14617.6	2.2e-32	1	1
ENSMMUP00000045919	DEAD	PF00270.29	7.6e-06	1	1
ENSMMUP00000003932	DEAD	PF00270.29	1e-05	1	1
ENSMMUP00000058030	DEAD	PF00270.29	1.1e-05	1	1
ENSMMUP00000042034	DEAD	PF00270.29	1.1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000064907	-	840	-	ENSMMUP00000042034	279 (aa)	-	H9EWX3
ENSMMUT00000004168	-	786	XM_015128690	ENSMMUP00000003932	261 (aa)	XP_014984176	F7GZZ0
ENSMMUT00000062791	-	675	-	ENSMMUP00000045919	225 (aa)	-	A0A1D5QD00
ENSMMUT00000064643	-	810	-	ENSMMUP00000058030	269 (aa)	-	A0A1D5RCI8

Gene Model

Click here to download ENSMMUG00000002939's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000002939's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000002939	CMSS1	100	96.889	ENSG00000184220	CMSS1	100	96.889	Homo_sapiens
ENSMMUG00000002939	CMSS1	85	64.583	ENSAPOG00000010604	cmss1	82	63.861	Acanthochromis_polyacanthus
ENSMMUG00000002939	CMSS1	98	92.308	ENSAMEG00000004092	CMSS1	100	89.575	Ailuropoda_melanoleuca
ENSMMUG00000002939	CMSS1	85	53.646	ENSACIG00000021854	cmss1	87	47.755	Amphilophus_citrinellus
ENSMMUG00000002939	CMSS1	100	50.165	ENSAOCG00000013361	cmss1	100	51.505	Amphiprion_ocellaris
ENSMMUG00000002939	CMSS1	85	64.583	ENSAPEG00000005829	cmss1	100	51.333	Amphiprion_percula
ENSMMUG00000002939	CMSS1	100	51.903	ENSATEG00000008209	cmss1	100	53.425	Anabas_testudineus
ENSMMUG00000002939	CMSS1	97	68.636	ENSAPLG00000010542	CMSS1	100	68.696	Anas_platyrhynchos
ENSMMUG00000002939	CMSS1	98	66.964	ENSACAG00000011065	CMSS1	99	61.111	Anolis_carolinensis
ENSMMUG00000002939	CMSS1	100	93.929	ENSANAG00000023565	CMSS1	100	93.929	Aotus_nancymaae
ENSMMUG00000002939	CMSS1	100	48.355	ENSACLG00000027294	cmss1	100	49.342	Astatotilapia_calliptera
ENSMMUG00000002939	CMSS1	100	45.000	ENSAMXG00000002046	cmss1	100	46.284	Astyanax_mexicanus
ENSMMUG00000002939	CMSS1	98	90.455	ENSBTAG00000013663	CMSS1	100	87.455	Bos_taurus
ENSMMUG00000002939	CMSS1	100	93.571	ENSCJAG00000000610	CMSS1	100	93.571	Callithrix_jacchus
ENSMMUG00000002939	CMSS1	100	90.421	ENSCAFG00000009230	CMSS1	95	90.421	Canis_familiaris
ENSMMUG00000002939	CMSS1	90	92.118	ENSCAFG00020024156	-	76	80.816	Canis_lupus_dingo
ENSMMUG00000002939	CMSS1	98	92.273	ENSCAFG00020009464	-	95	90.734	Canis_lupus_dingo
ENSMMUG00000002939	CMSS1	98	90.909	ENSCHIG00000013003	CMSS1	95	87.356	Capra_hircus
ENSMMUG00000002939	CMSS1	99	90.347	ENSTSYG00000009266	CMSS1	99	90.347	Carlito_syrichta
ENSMMUG00000002939	CMSS1	95	71.689	ENSCAPG00000013584	CMSS1	100	73.362	Cavia_aperea
ENSMMUG00000002939	CMSS1	97	91.284	ENSCPOG00000014680	CMSS1	100	86.738	Cavia_porcellus
ENSMMUG00000002939	CMSS1	100	95.038	ENSCCAG00000034685	CMSS1	100	95.038	Cebus_capucinus
ENSMMUG00000002939	CMSS1	100	99.234	ENSCATG00000031980	CMSS1	100	99.234	Cercocebus_atys
ENSMMUG00000002939	CMSS1	97	93.607	ENSCLAG00000011241	CMSS1	98	93.886	Chinchilla_lanigera
ENSMMUG00000002939	CMSS1	98	98.636	ENSCSAG00000006024	CMSS1	100	99.184	Chlorocebus_sabaeus
ENSMMUG00000002939	CMSS1	100	68.817	ENSCHOG00000012098	CMSS1	100	68.817	Choloepus_hoffmanni
ENSMMUG00000002939	CMSS1	80	39.785	ENSCING00000014848	-	100	40.642	Ciona_intestinalis
ENSMMUG00000002939	CMSS1	50	40.351	ENSCSAVG00000002309	-	98	41.129	Ciona_savignyi
ENSMMUG00000002939	CMSS1	100	98.566	ENSCANG00000031337	CMSS1	100	98.566	Colobus_angolensis_palliatus
ENSMMUG00000002939	CMSS1	100	82.079	ENSCGRG00001014305	Cmss1	100	82.079	Cricetulus_griseus_chok1gshd
ENSMMUG00000002939	CMSS1	98	84.091	ENSCGRG00000006722	Cmss1	99	83.203	Cricetulus_griseus_crigri
ENSMMUG00000002939	CMSS1	100	50.168	ENSCSEG00000004958	cmss1	100	50.329	Cynoglossus_semilaevis
ENSMMUG00000002939	CMSS1	100	50.519	ENSCVAG00000005039	cmss1	100	51.890	Cyprinodon_variegatus
ENSMMUG00000002939	CMSS1	96	52.036	ENSDARG00000112579	cmss1	100	46.233	Danio_rerio
ENSMMUG00000002939	CMSS1	98	89.545	ENSDNOG00000040418	CMSS1	96	83.704	Dasypus_novemcinctus
ENSMMUG00000002939	CMSS1	98	90.455	ENSDORG00000010461	Cmss1	100	87.097	Dipodomys_ordii
ENSMMUG00000002939	CMSS1	54	51.240	ENSEBUG00000002156	-	96	49.242	Eptatretus_burgeri
ENSMMUG00000002939	CMSS1	97	93.119	ENSEASG00005010966	CMSS1	99	92.694	Equus_asinus_asinus
ENSMMUG00000002939	CMSS1	98	91.818	ENSECAG00000015662	CMSS1	99	92.035	Equus_caballus
ENSMMUG00000002939	CMSS1	97	61.009	ENSEEUG00000007624	-	100	56.631	Erinaceus_europaeus
ENSMMUG00000002939	CMSS1	92	56.667	ENSELUG00000019459	cmss1	100	50.667	Esox_lucius
ENSMMUG00000002939	CMSS1	100	92.473	ENSFCAG00000044577	CMSS1	100	92.473	Felis_catus
ENSMMUG00000002939	CMSS1	97	65.297	ENSFALG00000005816	CMSS1	100	64.557	Ficedula_albicollis
ENSMMUG00000002939	CMSS1	97	90.826	ENSFDAG00000012577	CMSS1	100	91.228	Fukomys_damarensis
ENSMMUG00000002939	CMSS1	96	60.181	ENSFHEG00000012008	cmss1	95	59.740	Fundulus_heteroclitus
ENSMMUG00000002939	CMSS1	99	49.153	ENSGMOG00000016729	cmss1	100	51.736	Gadus_morhua
ENSMMUG00000002939	CMSS1	98	69.091	ENSGALG00000015267	CMSS1	100	62.977	Gallus_gallus
ENSMMUG00000002939	CMSS1	88	63.959	ENSGAFG00000021217	cmss1	77	62.871	Gambusia_affinis
ENSMMUG00000002939	CMSS1	92	56.731	ENSGACG00000002798	cmss1	100	49.645	Gasterosteus_aculeatus
ENSMMUG00000002939	CMSS1	98	71.818	ENSGAGG00000019861	CMSS1	100	62.724	Gopherus_agassizii
ENSMMUG00000002939	CMSS1	100	97.701	ENSGGOG00000014125	CMSS1	100	97.701	Gorilla_gorilla
ENSMMUG00000002939	CMSS1	100	48.515	ENSHBUG00000008431	cmss1	100	49.175	Haplochromis_burtoni
ENSMMUG00000002939	CMSS1	96	90.783	ENSHGLG00000019481	CMSS1	100	85.375	Heterocephalus_glaber_female
ENSMMUG00000002939	CMSS1	96	90.783	ENSHGLG00100010314	CMSS1	100	85.603	Heterocephalus_glaber_male
ENSMMUG00000002939	CMSS1	93	61.860	ENSHCOG00000003222	cmss1	100	52.000	Hippocampus_comes
ENSMMUG00000002939	CMSS1	94	55.450	ENSIPUG00000011591	cmss1	100	47.603	Ictalurus_punctatus
ENSMMUG00000002939	CMSS1	98	92.727	ENSSTOG00000019366	CMSS1	100	90.323	Ictidomys_tridecemlineatus
ENSMMUG00000002939	CMSS1	98	87.273	ENSJJAG00000014894	Cmss1	100	83.513	Jaculus_jaculus
ENSMMUG00000002939	CMSS1	85	53.646	ENSKMAG00000002390	cmss1	81	53.465	Kryptolebias_marmoratus
ENSMMUG00000002939	CMSS1	94	51.739	ENSLBEG00000006298	cmss1	83	58.128	Labrus_bergylta
ENSMMUG00000002939	CMSS1	97	64.091	ENSLACG00000009293	CMSS1	100	63.913	Latimeria_chalumnae
ENSMMUG00000002939	CMSS1	96	56.682	ENSLOCG00000009391	cmss1	100	50.704	Lepisosteus_oculatus
ENSMMUG00000002939	CMSS1	97	90.367	ENSLAFG00000017509	CMSS1	100	90.789	Loxodonta_africana
ENSMMUG00000002939	CMSS1	100	99.642	ENSMFAG00000045006	CMSS1	100	99.642	Macaca_fascicularis
ENSMMUG00000002939	CMSS1	100	99.283	ENSMNEG00000031315	CMSS1	100	99.283	Macaca_nemestrina
ENSMMUG00000002939	CMSS1	100	98.925	ENSMLEG00000033660	CMSS1	100	98.925	Mandrillus_leucophaeus
ENSMMUG00000002939	CMSS1	100	51.171	ENSMAMG00000017176	cmss1	100	51.877	Mastacembelus_armatus
ENSMMUG00000002939	CMSS1	100	48.355	ENSMZEG00005021886	cmss1	100	49.342	Maylandia_zebra
ENSMMUG00000002939	CMSS1	97	68.349	ENSMGAG00000014360	CMSS1	100	67.982	Meleagris_gallopavo
ENSMMUG00000002939	CMSS1	100	61.071	ENSMAUG00000020609	Cmss1	100	61.071	Mesocricetus_auratus
ENSMMUG00000002939	CMSS1	100	92.115	ENSMICG00000048977	CMSS1	100	92.115	Microcebus_murinus
ENSMMUG00000002939	CMSS1	100	81.362	ENSMOCG00000021937	Cmss1	100	81.362	Microtus_ochrogaster
ENSMMUG00000002939	CMSS1	85	61.979	ENSMMOG00000019794	cmss1	95	56.652	Mola_mola
ENSMMUG00000002939	CMSS1	97	78.539	ENSMODG00000002275	CMSS1	97	72.308	Monodelphis_domestica
ENSMMUG00000002939	CMSS1	100	52.397	ENSMALG00000004250	cmss1	100	51.890	Monopterus_albus
ENSMMUG00000002939	CMSS1	100	81.786	MGP_CAROLIEiJ_G0020824	Cmss1	100	81.786	Mus_caroli
ENSMMUG00000002939	CMSS1	100	82.500	ENSMUSG00000022748	Cmss1	100	82.500	Mus_musculus
ENSMMUG00000002939	CMSS1	98	83.710	MGP_PahariEiJ_G0016524	Cmss1	100	81.071	Mus_pahari
ENSMMUG00000002939	CMSS1	98	84.163	MGP_SPRETEiJ_G0021724	Cmss1	100	81.786	Mus_spretus
ENSMMUG00000002939	CMSS1	98	95.000	ENSMPUG00000011324	CMSS1	100	92.308	Mustela_putorius_furo
ENSMMUG00000002939	CMSS1	99	91.188	ENSMLUG00000001131	CMSS1	99	91.538	Myotis_lucifugus
ENSMMUG00000002939	CMSS1	98	87.273	ENSNGAG00000020316	Cmss1	100	84.588	Nannospalax_galili
ENSMMUG00000002939	CMSS1	100	48.026	ENSNBRG00000003095	cmss1	100	49.342	Neolamprologus_brichardi
ENSMMUG00000002939	CMSS1	100	98.467	ENSNLEG00000034172	CMSS1	100	98.467	Nomascus_leucogenys
ENSMMUG00000002939	CMSS1	97	66.514	ENSMEUG00000014505	CMSS1	100	66.667	Notamacropus_eugenii
ENSMMUG00000002939	CMSS1	98	93.182	ENSOPRG00000002986	CMSS1	100	91.039	Ochotona_princeps
ENSMMUG00000002939	CMSS1	97	87.671	ENSODEG00000003558	-	100	81.495	Octodon_degus
ENSMMUG00000002939	CMSS1	98	76.818	ENSODEG00000001853	-	100	74.552	Octodon_degus
ENSMMUG00000002939	CMSS1	98	88.636	ENSODEG00000005226	-	100	85.663	Octodon_degus
ENSMMUG00000002939	CMSS1	92	79.227	ENSODEG00000009446	-	100	70.251	Octodon_degus
ENSMMUG00000002939	CMSS1	85	60.938	ENSONIG00000006678	cmss1	88	54.733	Oreochromis_niloticus
ENSMMUG00000002939	CMSS1	98	75.455	ENSOANG00000007529	CMSS1	100	73.820	Ornithorhynchus_anatinus
ENSMMUG00000002939	CMSS1	100	90.805	ENSOCUG00000025366	CMSS1	95	90.805	Oryctolagus_cuniculus
ENSMMUG00000002939	CMSS1	100	52.740	ENSORLG00000020340	cmss1	100	53.741	Oryzias_latipes
ENSMMUG00000002939	CMSS1	97	54.587	ENSORLG00020012235	cmss1	99	54.506	Oryzias_latipes_hni
ENSMMUG00000002939	CMSS1	85	55.729	ENSORLG00015015551	cmss1	75	56.436	Oryzias_latipes_hsok
ENSMMUG00000002939	CMSS1	100	53.448	ENSOMEG00000012555	cmss1	100	53.633	Oryzias_melastigma
ENSMMUG00000002939	CMSS1	97	91.743	ENSOGAG00000002045	CMSS1	100	92.105	Otolemur_garnettii
ENSMMUG00000002939	CMSS1	97	91.324	ENSOARG00000017899	CMSS1	89	88.760	Ovis_aries
ENSMMUG00000002939	CMSS1	100	96.935	ENSPPAG00000038515	CMSS1	95	97.674	Pan_paniscus
ENSMMUG00000002939	CMSS1	100	92.473	ENSPPRG00000016767	CMSS1	100	92.473	Panthera_pardus
ENSMMUG00000002939	CMSS1	100	92.115	ENSPTIG00000018274	CMSS1	100	92.115	Panthera_tigris_altaica
ENSMMUG00000002939	CMSS1	100	96.935	ENSPTRG00000015157	CMSS1	100	97.143	Pan_troglodytes
ENSMMUG00000002939	CMSS1	97	99.083	ENSPANG00000019980	CMSS1	99	94.186	Papio_anubis
ENSMMUG00000002939	CMSS1	96	60.455	ENSPKIG00000012609	cmss1	97	56.439	Paramormyrops_kingsleyae
ENSMMUG00000002939	CMSS1	97	72.603	ENSPSIG00000003849	CMSS1	100	72.489	Pelodiscus_sinensis
ENSMMUG00000002939	CMSS1	91	58.852	ENSPMGG00000010286	cmss1	100	56.780	Periophthalmus_magnuspinnatus
ENSMMUG00000002939	CMSS1	98	85.000	ENSPEMG00000016384	Cmss1	100	82.857	Peromyscus_maniculatus_bairdii
ENSMMUG00000002939	CMSS1	83	54.545	ENSPMAG00000001146	cmss1	99	52.970	Petromyzon_marinus
ENSMMUG00000002939	CMSS1	98	77.273	ENSPCIG00000015656	CMSS1	100	71.970	Phascolarctos_cinereus
ENSMMUG00000002939	CMSS1	100	51.399	ENSPFOG00000016849	cmss1	100	51.748	Poecilia_formosa
ENSMMUG00000002939	CMSS1	100	51.049	ENSPLAG00000008323	cmss1	100	51.399	Poecilia_latipinna
ENSMMUG00000002939	CMSS1	100	49.508	ENSPMEG00000021020	cmss1	100	52.414	Poecilia_mexicana
ENSMMUG00000002939	CMSS1	97	58.744	ENSPREG00000007618	cmss1	69	61.881	Poecilia_reticulata
ENSMMUG00000002939	CMSS1	100	95.699	ENSPPYG00000013606	CMSS1	100	95.699	Pongo_abelii
ENSMMUG00000002939	CMSS1	98	93.636	ENSPCOG00000020035	CMSS1	100	91.398	Propithecus_coquereli
ENSMMUG00000002939	CMSS1	100	78.495	ENSPVAG00000017031	CMSS1	100	78.495	Pteropus_vampyrus
ENSMMUG00000002939	CMSS1	78	63.068	ENSPNYG00000013428	cmss1	97	49.281	Pundamilia_nyererei
ENSMMUG00000002939	CMSS1	96	52.941	ENSPNAG00000007912	cmss1	100	47.841	Pygocentrus_nattereri
ENSMMUG00000002939	CMSS1	98	83.710	ENSRNOG00000027888	Cmss1	100	81.538	Rattus_norvegicus
ENSMMUG00000002939	CMSS1	100	97.849	ENSRBIG00000037931	CMSS1	100	97.849	Rhinopithecus_bieti
ENSMMUG00000002939	CMSS1	100	97.849	ENSRROG00000042910	CMSS1	100	97.849	Rhinopithecus_roxellana
ENSMMUG00000002939	CMSS1	100	94.275	ENSSBOG00000030980	CMSS1	100	94.275	Saimiri_boliviensis_boliviensis
ENSMMUG00000002939	CMSS1	97	78.539	ENSSHAG00000009321	CMSS1	99	74.603	Sarcophilus_harrisii
ENSMMUG00000002939	CMSS1	96	60.455	ENSSFOG00015001509	cmss1	100	54.296	Scleropages_formosus
ENSMMUG00000002939	CMSS1	100	50.515	ENSSMAG00000001653	cmss1	100	51.171	Scophthalmus_maximus
ENSMMUG00000002939	CMSS1	96	59.361	ENSSDUG00000007719	cmss1	100	53.425	Seriola_dumerili
ENSMMUG00000002939	CMSS1	88	63.452	ENSSLDG00000012300	cmss1	75	58.333	Seriola_lalandi_dorsalis
ENSMMUG00000002939	CMSS1	100	75.000	ENSSARG00000003584	CMSS1	100	75.000	Sorex_araneus
ENSMMUG00000002939	CMSS1	96	69.444	ENSSPUG00000003865	CMSS1	100	69.469	Sphenodon_punctatus
ENSMMUG00000002939	CMSS1	87	63.776	ENSSPAG00000019182	cmss1	82	54.307	Stegastes_partitus
ENSMMUG00000002939	CMSS1	100	92.473	ENSSSCG00000011970	CMSS1	100	92.473	Sus_scrofa
ENSMMUG00000002939	CMSS1	97	65.297	ENSTGUG00000013635	CMSS1	100	65.502	Taeniopygia_guttata
ENSMMUG00000002939	CMSS1	100	51.228	ENSTRUG00000015265	cmss1	100	51.930	Takifugu_rubripes
ENSMMUG00000002939	CMSS1	85	56.250	ENSTNIG00000002880	cmss1	73	55.446	Tetraodon_nigroviridis
ENSMMUG00000002939	CMSS1	97	67.431	ENSTBEG00000016722	CMSS1	100	60.357	Tupaia_belangeri
ENSMMUG00000002939	CMSS1	100	87.097	ENSTTRG00000001562	CMSS1	100	87.097	Tursiops_truncatus
ENSMMUG00000002939	CMSS1	98	93.636	ENSUAMG00000024209	CMSS1	100	94.170	Ursus_americanus
ENSMMUG00000002939	CMSS1	98	93.636	ENSUMAG00000001983	CMSS1	99	91.085	Ursus_maritimus
ENSMMUG00000002939	CMSS1	97	74.312	ENSVPAG00000000263	CMSS1	100	68.100	Vicugna_pacos
ENSMMUG00000002939	CMSS1	98	91.818	ENSVVUG00000021647	-	100	90.244	Vulpes_vulpes
ENSMMUG00000002939	CMSS1	92	92.233	ENSVVUG00000007776	-	85	92.593	Vulpes_vulpes
ENSMMUG00000002939	CMSS1	100	54.093	ENSXETG00000011858	cmss1	100	54.093	Xenopus_tropicalis
ENSMMUG00000002939	CMSS1	88	62.626	ENSXCOG00000018724	cmss1	69	62.376	Xiphophorus_couchianus
ENSMMUG00000002939	CMSS1	88	62.626	ENSXMAG00000011243	cmss1	76	62.376	Xiphophorus_maculatus