EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000003260 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 1367 bases
Position: chr12:77495050-77496416
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000004343	RRM_1	PF00076.22	5.4e-31	1	2
ENSMMUP00000004343	RRM_1	PF00076.22	5.4e-31	2	2
ENSMMUP00000041819	RRM_1	PF00076.22	1.1e-30	1	2
ENSMMUP00000041819	RRM_1	PF00076.22	1.1e-30	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000061269	-	868	-	ENSMMUP00000041819	253 (aa)	-	A0A1D5Q1A7
ENSMMUT00000004609	-	624	-	ENSMMUP00000004343	207 (aa)	-	F7DJ34

Gene Model

Click here to download ENSMMUG00000003260's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000003260's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000003260	-	85	66.477	ENSMMUG00000016494	SRSF9	59	67.614
ENSMMUG00000003260	-	79	41.573	ENSMMUG00000006742	SRSF6	58	39.234
ENSMMUG00000003260	-	77	45.181	ENSMMUG00000022407	SUSD6	86	42.742
ENSMMUG00000003260	-	85	58.286	ENSMMUG00000040941	-	81	57.143
ENSMMUG00000003260	-	100	97.233	ENSMMUG00000004725	SRSF1	100	97.233

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000003260	-	100	97.233	ENSG00000136450	SRSF1	100	98.462	Homo_sapiens
ENSMMUG00000003260	-	93	89.062	ENSAPOG00000002748	-	99	81.148	Acanthochromis_polyacanthus
ENSMMUG00000003260	-	95	87.755	ENSAPOG00000008542	-	100	83.465	Acanthochromis_polyacanthus
ENSMMUG00000003260	-	97	94.309	ENSAMEG00000002635	SRSF1	99	94.309	Ailuropoda_melanoleuca
ENSMMUG00000003260	-	93	89.062	ENSACIG00000008091	srsf1a	99	75.720	Amphilophus_citrinellus
ENSMMUG00000003260	-	95	87.129	ENSAOCG00000000337	-	100	83.730	Amphiprion_ocellaris
ENSMMUG00000003260	-	93	89.583	ENSAOCG00000010671	-	99	81.967	Amphiprion_ocellaris
ENSMMUG00000003260	-	95	87.129	ENSAPEG00000023352	-	99	83.794	Amphiprion_percula
ENSMMUG00000003260	-	93	89.583	ENSAPEG00000009915	-	99	81.967	Amphiprion_percula
ENSMMUG00000003260	-	95	85.714	ENSATEG00000021567	-	100	82.114	Anabas_testudineus
ENSMMUG00000003260	-	93	89.583	ENSATEG00000022403	-	99	81.707	Anabas_testudineus
ENSMMUG00000003260	-	95	94.898	ENSACAG00000005542	-	100	94.758	Anolis_carolinensis
ENSMMUG00000003260	-	100	97.233	ENSANAG00000020583	-	100	97.233	Aotus_nancymaae
ENSMMUG00000003260	-	95	71.429	ENSANAG00000025417	-	99	74.797	Aotus_nancymaae
ENSMMUG00000003260	-	92	89.540	ENSAMXG00000035996	srsf1a	99	89.960	Astyanax_mexicanus
ENSMMUG00000003260	-	64	75.974	ENSAMXG00000024373	-	94	75.362	Astyanax_mexicanus
ENSMMUG00000003260	-	100	97.233	ENSBTAG00000014766	SRSF1	100	97.233	Bos_taurus
ENSMMUG00000003260	-	100	97.233	ENSCJAG00000041713	-	100	97.233	Callithrix_jacchus
ENSMMUG00000003260	-	94	90.256	ENSCJAG00000008111	-	88	89.848	Callithrix_jacchus
ENSMMUG00000003260	-	100	97.233	ENSCAFG00000017430	SRSF1	100	97.233	Canis_familiaris
ENSMMUG00000003260	-	100	97.233	ENSCAFG00020025632	-	100	97.233	Canis_lupus_dingo
ENSMMUG00000003260	-	97	97.154	ENSCHIG00000010787	SRSF1	99	97.154	Capra_hircus
ENSMMUG00000003260	-	100	97.233	ENSTSYG00000013899	-	100	97.233	Carlito_syrichta
ENSMMUG00000003260	-	100	97.233	ENSCPOG00000032681	-	100	97.233	Cavia_porcellus
ENSMMUG00000003260	-	100	97.233	ENSCCAG00000029484	-	100	97.233	Cebus_capucinus
ENSMMUG00000003260	-	100	97.233	ENSCATG00000042294	-	100	97.233	Cercocebus_atys
ENSMMUG00000003260	-	100	97.233	ENSCLAG00000014707	-	100	97.233	Chinchilla_lanigera
ENSMMUG00000003260	-	100	96.443	ENSCSAG00000005642	-	100	96.443	Chlorocebus_sabaeus
ENSMMUG00000003260	-	97	97.154	ENSCHOG00000001899	SRSF1	99	97.154	Choloepus_hoffmanni
ENSMMUG00000003260	-	100	96.047	ENSCPBG00000009851	-	100	96.047	Chrysemys_picta_bellii
ENSMMUG00000003260	-	100	97.233	ENSCANG00000029726	-	100	97.233	Colobus_angolensis_palliatus
ENSMMUG00000003260	-	100	97.233	ENSCGRG00001000670	Srsf1	100	97.233	Cricetulus_griseus_chok1gshd
ENSMMUG00000003260	-	100	97.233	ENSCGRG00000005590	Srsf1	100	97.233	Cricetulus_griseus_crigri
ENSMMUG00000003260	-	93	88.205	ENSCSEG00000014272	-	99	81.377	Cynoglossus_semilaevis
ENSMMUG00000003260	-	95	80.660	ENSCSEG00000009973	-	100	77.652	Cynoglossus_semilaevis
ENSMMUG00000003260	-	93	89.583	ENSCVAG00000018617	-	99	81.967	Cyprinodon_variegatus
ENSMMUG00000003260	-	94	85.787	ENSCVAG00000005458	-	98	83.333	Cyprinodon_variegatus
ENSMMUG00000003260	-	93	93.782	ENSDARG00000017843	srsf1b	99	91.020	Danio_rerio
ENSMMUG00000003260	-	94	86.765	ENSDARG00000057691	srsf1a	99	88.583	Danio_rerio
ENSMMUG00000003260	-	100	97.233	ENSDNOG00000011737	-	100	97.233	Dasypus_novemcinctus
ENSMMUG00000003260	-	100	97.233	ENSDORG00000015082	Srsf1	100	97.233	Dipodomys_ordii
ENSMMUG00000003260	-	89	95.652	ENSETEG00000005349	-	63	95.652	Echinops_telfairi
ENSMMUG00000003260	-	100	97.233	ENSEASG00005002922	-	100	97.233	Equus_asinus_asinus
ENSMMUG00000003260	-	97	97.154	ENSECAG00000016654	SRSF1	99	97.154	Equus_caballus
ENSMMUG00000003260	-	89	96.739	ENSEEUG00000009255	-	63	96.739	Erinaceus_europaeus
ENSMMUG00000003260	-	93	88.601	ENSELUG00000021646	srsf1a	99	77.108	Esox_lucius
ENSMMUG00000003260	-	100	97.233	ENSFCAG00000002250	-	100	97.233	Felis_catus
ENSMMUG00000003260	-	100	81.423	ENSFALG00000005062	-	100	81.423	Ficedula_albicollis
ENSMMUG00000003260	-	100	97.233	ENSFDAG00000010646	-	100	97.233	Fukomys_damarensis
ENSMMUG00000003260	-	93	89.583	ENSFHEG00000003174	srsf1a	99	81.967	Fundulus_heteroclitus
ENSMMUG00000003260	-	93	86.979	ENSGMOG00000014787	-	99	80.579	Gadus_morhua
ENSMMUG00000003260	-	95	95.408	ENSGALG00000005525	SRSF1	100	95.161	Gallus_gallus
ENSMMUG00000003260	-	95	84.184	ENSGACG00000020621	srsf1b	100	71.951	Gasterosteus_aculeatus
ENSMMUG00000003260	-	100	96.047	ENSGAGG00000022965	-	100	96.047	Gopherus_agassizii
ENSMMUG00000003260	-	100	97.233	ENSGGOG00000004386	SRSF1	100	97.233	Gorilla_gorilla
ENSMMUG00000003260	-	93	89.062	ENSHBUG00000016788	srsf1a	99	81.557	Haplochromis_burtoni
ENSMMUG00000003260	-	85	95.814	ENSHGLG00000000600	-	100	95.814	Heterocephalus_glaber_female
ENSMMUG00000003260	-	85	95.814	ENSHGLG00000000669	-	100	95.814	Heterocephalus_glaber_female
ENSMMUG00000003260	-	100	97.233	ENSHGLG00100016906	-	100	97.233	Heterocephalus_glaber_male
ENSMMUG00000003260	-	93	84.264	ENSHCOG00000018918	srsf1a	98	79.200	Hippocampus_comes
ENSMMUG00000003260	-	93	88.442	ENSIPUG00000017039	srsf1a	99	89.960	Ictalurus_punctatus
ENSMMUG00000003260	-	95	90.306	ENSIPUG00000008750	srsf1b	100	87.500	Ictalurus_punctatus
ENSMMUG00000003260	-	100	97.233	ENSSTOG00000000243	-	100	97.233	Ictidomys_tridecemlineatus
ENSMMUG00000003260	-	100	97.233	ENSJJAG00000000102	-	100	97.233	Jaculus_jaculus
ENSMMUG00000003260	-	61	85.827	ENSJJAG00000014464	-	95	86.614	Jaculus_jaculus
ENSMMUG00000003260	-	93	88.021	ENSKMAG00000019232	srsf1a	99	81.148	Kryptolebias_marmoratus
ENSMMUG00000003260	-	93	88.542	ENSLBEG00000020864	-	99	81.148	Labrus_bergylta
ENSMMUG00000003260	-	95	80.402	ENSLBEG00000015294	-	99	80.000	Labrus_bergylta
ENSMMUG00000003260	-	93	89.119	ENSLACG00000014160	srsf1a	92	91.020	Latimeria_chalumnae
ENSMMUG00000003260	-	95	90.816	ENSLOCG00000005994	srsf1a	100	90.726	Lepisosteus_oculatus
ENSMMUG00000003260	-	97	97.154	ENSLAFG00000025743	SRSF1	99	97.154	Loxodonta_africana
ENSMMUG00000003260	-	100	97.233	ENSMFAG00000040003	-	100	97.233	Macaca_fascicularis
ENSMMUG00000003260	-	100	97.233	ENSMNEG00000027680	-	100	97.233	Macaca_nemestrina
ENSMMUG00000003260	-	100	99.605	ENSMNEG00000015983	-	100	99.605	Macaca_nemestrina
ENSMMUG00000003260	-	100	94.862	ENSMLEG00000015243	-	100	94.862	Mandrillus_leucophaeus
ENSMMUG00000003260	-	97	97.154	ENSMLEG00000040509	SRSF1	99	97.154	Mandrillus_leucophaeus
ENSMMUG00000003260	-	93	89.583	ENSMAMG00000018454	-	99	81.967	Mastacembelus_armatus
ENSMMUG00000003260	-	95	90.306	ENSMAMG00000019691	-	100	85.366	Mastacembelus_armatus
ENSMMUG00000003260	-	95	85.714	ENSMAMG00000019687	-	100	82.258	Mastacembelus_armatus
ENSMMUG00000003260	-	100	97.233	ENSMAUG00000021845	Srsf1	100	97.233	Mesocricetus_auratus
ENSMMUG00000003260	-	100	97.233	ENSMICG00000013639	-	100	97.233	Microcebus_murinus
ENSMMUG00000003260	-	100	97.233	ENSMOCG00000001996	Srsf1	100	97.233	Microtus_ochrogaster
ENSMMUG00000003260	-	93	88.021	ENSMMOG00000014354	srsf1a	99	75.720	Mola_mola
ENSMMUG00000003260	-	89	95.676	ENSMODG00000014781	-	63	95.676	Monodelphis_domestica
ENSMMUG00000003260	-	93	87.565	ENSMALG00000017129	-	75	85.492	Monopterus_albus
ENSMMUG00000003260	-	95	75.510	ENSMALG00000007763	-	83	76.214	Monopterus_albus
ENSMMUG00000003260	-	100	97.233	MGP_CAROLIEiJ_G0016943	Srsf1	100	97.233	Mus_caroli
ENSMMUG00000003260	-	100	97.233	ENSMUSG00000018379	Srsf1	100	97.233	Mus_musculus
ENSMMUG00000003260	-	100	97.233	MGP_PahariEiJ_G0018074	Srsf1	100	97.233	Mus_pahari
ENSMMUG00000003260	-	100	97.233	MGP_SPRETEiJ_G0017790	Srsf1	100	97.233	Mus_spretus
ENSMMUG00000003260	-	97	97.154	ENSMPUG00000015369	SRSF1	99	97.154	Mustela_putorius_furo
ENSMMUG00000003260	-	95	86.224	ENSMLUG00000023995	-	100	89.113	Myotis_lucifugus
ENSMMUG00000003260	-	97	97.154	ENSMLUG00000011040	SRSF1	99	97.154	Myotis_lucifugus
ENSMMUG00000003260	-	97	97.154	ENSNGAG00000011395	Srsf1	99	97.154	Nannospalax_galili
ENSMMUG00000003260	-	95	79.592	ENSNBRG00000008041	srsf1b	80	80.203	Neolamprologus_brichardi
ENSMMUG00000003260	-	100	97.233	ENSNLEG00000008088	-	100	97.233	Nomascus_leucogenys
ENSMMUG00000003260	-	61	88.976	ENSMEUG00000002783	-	100	92.913	Notamacropus_eugenii
ENSMMUG00000003260	-	72	95.628	ENSOPRG00000001234	-	100	95.628	Ochotona_princeps
ENSMMUG00000003260	-	100	96.443	ENSODEG00000011481	-	100	96.443	Octodon_degus
ENSMMUG00000003260	-	95	89.286	ENSONIG00000004860	-	81	87.817	Oreochromis_niloticus
ENSMMUG00000003260	-	93	89.062	ENSONIG00000013160	-	98	81.557	Oreochromis_niloticus
ENSMMUG00000003260	-	94	71.282	ENSOCUG00000010894	-	77	69.744	Oryctolagus_cuniculus
ENSMMUG00000003260	-	93	89.583	ENSORLG00000004580	srsf1a	99	81.967	Oryzias_latipes
ENSMMUG00000003260	-	93	89.583	ENSORLG00020009456	srsf1a	99	81.967	Oryzias_latipes_hni
ENSMMUG00000003260	-	93	89.583	ENSORLG00015014384	srsf1a	98	81.893	Oryzias_latipes_hsok
ENSMMUG00000003260	-	85	87.429	ENSOMEG00000004106	srsf1a	92	79.646	Oryzias_melastigma
ENSMMUG00000003260	-	97	97.154	ENSOGAG00000025950	-	99	97.154	Otolemur_garnettii
ENSMMUG00000003260	-	97	92.683	ENSOARG00000008323	SRSF1	99	92.683	Ovis_aries
ENSMMUG00000003260	-	100	97.233	ENSPPAG00000043403	-	100	97.233	Pan_paniscus
ENSMMUG00000003260	-	100	97.233	ENSPPRG00000004238	-	100	97.233	Panthera_pardus
ENSMMUG00000003260	-	100	97.233	ENSPTRG00000049077	SRSF1	100	97.233	Pan_troglodytes
ENSMMUG00000003260	-	100	76.680	ENSPANG00000030275	-	80	97.101	Papio_anubis
ENSMMUG00000003260	-	100	97.233	ENSPANG00000022305	-	100	97.233	Papio_anubis
ENSMMUG00000003260	-	94	90.206	ENSPKIG00000007204	srsf1a	99	89.754	Paramormyrops_kingsleyae
ENSMMUG00000003260	-	95	90.306	ENSPKIG00000012857	srsf1b	100	87.903	Paramormyrops_kingsleyae
ENSMMUG00000003260	-	95	88.265	ENSPSIG00000009000	-	100	89.516	Pelodiscus_sinensis
ENSMMUG00000003260	-	93	86.458	ENSPMGG00000013112	-	99	83.133	Periophthalmus_magnuspinnatus
ENSMMUG00000003260	-	92	83.691	ENSPMGG00000005467	-	99	82.479	Periophthalmus_magnuspinnatus
ENSMMUG00000003260	-	100	97.233	ENSPEMG00000021416	Srsf1	100	97.233	Peromyscus_maniculatus_bairdii
ENSMMUG00000003260	-	97	96.356	ENSPCIG00000006076	-	99	96.356	Phascolarctos_cinereus
ENSMMUG00000003260	-	94	86.224	ENSPFOG00000018325	-	70	86.598	Poecilia_formosa
ENSMMUG00000003260	-	94	86.224	ENSPLAG00000008416	srsf1b	79	86.598	Poecilia_latipinna
ENSMMUG00000003260	-	94	86.224	ENSPMEG00000002388	-	79	86.598	Poecilia_mexicana
ENSMMUG00000003260	-	59	84.553	ENSPMEG00000014312	-	98	85.366	Poecilia_mexicana
ENSMMUG00000003260	-	59	84.553	ENSPMEG00000020607	-	98	85.366	Poecilia_mexicana
ENSMMUG00000003260	-	93	89.583	ENSPREG00000009667	srsf1a	99	81.967	Poecilia_reticulata
ENSMMUG00000003260	-	100	97.233	ENSPPYG00000008240	SRSF1	100	97.233	Pongo_abelii
ENSMMUG00000003260	-	97	97.154	ENSPCAG00000005199	SRSF1	99	97.154	Procavia_capensis
ENSMMUG00000003260	-	100	75.362	ENSPCOG00000025736	-	100	75.362	Propithecus_coquereli
ENSMMUG00000003260	-	100	97.233	ENSPCOG00000023654	-	100	97.233	Propithecus_coquereli
ENSMMUG00000003260	-	73	98.462	ENSPVAG00000000519	-	74	98.462	Pteropus_vampyrus
ENSMMUG00000003260	-	93	88.601	ENSPNAG00000022241	srsf1a	99	88.115	Pygocentrus_nattereri
ENSMMUG00000003260	-	95	88.776	ENSPNAG00000014601	srsf1b	100	85.887	Pygocentrus_nattereri
ENSMMUG00000003260	-	97	97.154	ENSRNOG00000050323	Srsf1	99	97.154	Rattus_norvegicus
ENSMMUG00000003260	-	100	97.233	ENSRBIG00000034445	-	100	97.233	Rhinopithecus_bieti
ENSMMUG00000003260	-	100	97.233	ENSRROG00000041506	-	100	97.233	Rhinopithecus_roxellana
ENSMMUG00000003260	-	100	97.233	ENSSBOG00000025377	-	100	97.233	Saimiri_boliviensis_boliviensis
ENSMMUG00000003260	-	97	96.356	ENSSHAG00000002552	-	99	96.356	Sarcophilus_harrisii
ENSMMUG00000003260	-	94	90.769	ENSSFOG00015004800	srsf1a	99	90.688	Scleropages_formosus
ENSMMUG00000003260	-	93	88.021	ENSSMAG00000007018	-	98	80.247	Scophthalmus_maximus
ENSMMUG00000003260	-	95	82.759	ENSSMAG00000009719	-	100	83.922	Scophthalmus_maximus
ENSMMUG00000003260	-	95	80.402	ENSSDUG00000003929	-	99	75.502	Seriola_dumerili
ENSMMUG00000003260	-	93	88.542	ENSSDUG00000011303	-	99	81.148	Seriola_dumerili
ENSMMUG00000003260	-	95	80.711	ENSSLDG00000016868	-	99	79.839	Seriola_lalandi_dorsalis
ENSMMUG00000003260	-	90	79.679	ENSSLDG00000016895	-	99	72.874	Seriola_lalandi_dorsalis
ENSMMUG00000003260	-	93	88.542	ENSSLDG00000010543	-	99	81.148	Seriola_lalandi_dorsalis
ENSMMUG00000003260	-	89	96.739	ENSSARG00000010949	-	63	96.739	Sorex_araneus
ENSMMUG00000003260	-	100	96.047	ENSSPUG00000000804	-	100	96.047	Sphenodon_punctatus
ENSMMUG00000003260	-	95	85.096	ENSSPAG00000014152	-	99	81.853	Stegastes_partitus
ENSMMUG00000003260	-	93	89.062	ENSSPAG00000022562	-	99	82.377	Stegastes_partitus
ENSMMUG00000003260	-	100	97.233	ENSSSCG00000017626	-	100	97.233	Sus_scrofa
ENSMMUG00000003260	-	64	93.939	ENSTGUG00000008416	-	100	94.022	Taeniopygia_guttata
ENSMMUG00000003260	-	93	88.542	ENSTRUG00000003691	srsf1a	99	81.148	Takifugu_rubripes
ENSMMUG00000003260	-	93	87.500	ENSTNIG00000016223	srsf1a	98	81.148	Tetraodon_nigroviridis
ENSMMUG00000003260	-	89	95.109	ENSTBEG00000015378	-	63	95.109	Tupaia_belangeri
ENSMMUG00000003260	-	72	95.628	ENSTTRG00000007310	SRSF1	100	95.628	Tursiops_truncatus
ENSMMUG00000003260	-	97	97.154	ENSUAMG00000009858	SRSF1	99	97.154	Ursus_americanus
ENSMMUG00000003260	-	100	97.233	ENSUMAG00000000455	-	100	97.233	Ursus_maritimus
ENSMMUG00000003260	-	98	95.968	ENSVPAG00000010094	SRSF1	100	95.968	Vicugna_pacos
ENSMMUG00000003260	-	100	97.233	ENSVVUG00000011882	-	100	97.233	Vulpes_vulpes
ENSMMUG00000003260	-	95	90.306	ENSXETG00000008954	srsf1	100	86.517	Xenopus_tropicalis
ENSMMUG00000003260	-	93	89.583	ENSXMAG00000011766	srsf1a	99	81.967	Xiphophorus_maculatus