EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000003458 (Gene tree)
Gene ID: 713147
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 1746932 bases
Position: chr20:6034767-7781698
Accession: 713147
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000043120	Fox-1_C	PF12414.8	1.2e-42	1	1
ENSMMUP00000004606	Fox-1_C	PF12414.8	1.7e-42	1	1
ENSMMUP00000043896	Fox-1_C	PF12414.8	1.9e-42	1	1
ENSMMUP00000004608	Fox-1_C	PF12414.8	2e-40	1	1
ENSMMUP00000058348	Fox-1_C	PF12414.8	2.7e-40	1	1
ENSMMUP00000053599	Fox-1_C	PF12414.8	2.8e-40	1	1
ENSMMUP00000057794	Fox-1_C	PF12414.8	3e-40	1	1
ENSMMUP00000060857	Fox-1_C	PF12414.8	4e-40	1	1
ENSMMUP00000058348	RRM_1	PF00076.22	4.4e-18	1	1
ENSMMUP00000043120	RRM_1	PF00076.22	4.6e-18	1	1
ENSMMUP00000004608	RRM_1	PF00076.22	4.8e-18	1	1
ENSMMUP00000004606	RRM_1	PF00076.22	5e-18	1	1
ENSMMUP00000043896	RRM_1	PF00076.22	5.4e-18	1	1
ENSMMUP00000060857	RRM_1	PF00076.22	6.1e-18	1	1
ENSMMUP00000057794	RRM_1	PF00076.22	8.5e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000067978	RBFOX1-207	1315	XM_015125506	ENSMMUP00000058348	370 (aa)	XP_014980992	A0A1D5RDF5
ENSMMUT00000068942	RBFOX1-201	1401	XM_015125495	ENSMMUP00000060857	466 (aa)	XP_014980981	A0A1D5RKL3
ENSMMUT00000058265	RBFOX1-204	1143	XM_015125498	ENSMMUP00000053599	380 (aa)	XP_014980984	A0A1D5QZW6
ENSMMUT00000004892	RBFOX1-205	1257	XM_015125497	ENSMMUP00000004608	418 (aa)	XP_014980983	F7EBP0
ENSMMUT00000004890	RBFOX1-208	1191	XM_015125523	ENSMMUP00000004606	396 (aa)	XP_014981009	F7EBQ1
ENSMMUT00000066980	RBFOX1-203	1176	-	ENSMMUP00000057794	391 (aa)	-	A0A1D5RBV2
ENSMMUT00000057273	RBFOX1-206	1128	XM_015125515	ENSMMUP00000043120	375 (aa)	XP_014981001	A0A1D5Q505
ENSMMUT00000057154	RBFOX1-202	1278	XM_015125500	ENSMMUP00000043896	425 (aa)	XP_014980986	A0A1D5Q780

Gene Model

Click here to download ENSMMUG00000003458's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000003458's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000003458	RBFOX1	79	78.000	ENSMMUG00000023028	RBFOX3	100	76.825
ENSMMUG00000003458	RBFOX1	96	63.980	ENSMMUG00000014010	RBFOX2	100	63.452

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000003458	RBFOX1	100	99.785	ENSG00000078328	RBFOX1	100	99.785	Homo_sapiens
ENSMMUG00000003458	RBFOX1	97	81.316	ENSAPOG00000003197	rbfox1	98	81.365	Acanthochromis_polyacanthus
ENSMMUG00000003458	RBFOX1	61	96.957	ENSAMEG00000008605	RBFOX1	100	95.600	Ailuropoda_melanoleuca
ENSMMUG00000003458	RBFOX1	64	71.375	ENSACIG00000005478	rbfox1	68	71.375	Amphilophus_citrinellus
ENSMMUG00000003458	RBFOX1	79	70.968	ENSAOCG00000008283	rbfox1	96	77.857	Amphiprion_ocellaris
ENSMMUG00000003458	RBFOX1	95	71.164	ENSAPEG00000010636	rbfox1	100	71.274	Amphiprion_percula
ENSMMUG00000003458	RBFOX1	79	69.551	ENSATEG00000007513	rbfox1	97	75.704	Anabas_testudineus
ENSMMUG00000003458	RBFOX1	97	95.052	ENSAPLG00000013263	RBFOX1	96	95.052	Anas_platyrhynchos
ENSMMUG00000003458	RBFOX1	97	88.114	ENSACAG00000004013	RBFOX1	97	88.114	Anolis_carolinensis
ENSMMUG00000003458	RBFOX1	100	99.488	ENSANAG00000029527	RBFOX1	100	99.488	Aotus_nancymaae
ENSMMUG00000003458	RBFOX1	61	87.556	ENSAMXG00000002431	rbfox1	64	89.041	Astyanax_mexicanus
ENSMMUG00000003458	RBFOX1	99	98.645	ENSBTAG00000007210	RBFOX1	98	98.645	Bos_taurus
ENSMMUG00000003458	RBFOX1	100	99.233	ENSCJAG00000017351	RBFOX1	100	99.233	Callithrix_jacchus
ENSMMUG00000003458	RBFOX1	100	98.565	ENSCAFG00000019082	RBFOX1	100	98.565	Canis_familiaris
ENSMMUG00000003458	RBFOX1	99	83.924	ENSCAFG00020024881	RBFOX1	83	98.649	Canis_lupus_dingo
ENSMMUG00000003458	RBFOX1	99	98.645	ENSCHIG00000023549	RBFOX1	98	98.645	Capra_hircus
ENSMMUG00000003458	RBFOX1	99	99.180	ENSTSYG00000005334	RBFOX1	100	99.486	Carlito_syrichta
ENSMMUG00000003458	RBFOX1	100	97.129	ENSCAPG00000017669	RBFOX1	100	97.129	Cavia_aperea
ENSMMUG00000003458	RBFOX1	100	97.129	ENSCPOG00000011314	RBFOX1	100	97.129	Cavia_porcellus
ENSMMUG00000003458	RBFOX1	100	99.282	ENSCCAG00000023031	RBFOX1	100	99.533	Cebus_capucinus
ENSMMUG00000003458	RBFOX1	100	99.785	ENSCATG00000033816	RBFOX1	100	99.785	Cercocebus_atys
ENSMMUG00000003458	RBFOX1	99	98.634	ENSCLAG00000012761	RBFOX1	100	97.608	Chinchilla_lanigera
ENSMMUG00000003458	RBFOX1	99	99.729	ENSCSAG00000008739	RBFOX1	98	99.729	Chlorocebus_sabaeus
ENSMMUG00000003458	RBFOX1	100	76.077	ENSCHOG00000012843	RBFOX1	100	76.077	Choloepus_hoffmanni
ENSMMUG00000003458	RBFOX1	99	95.393	ENSCPBG00000026626	RBFOX1	98	95.393	Chrysemys_picta_bellii
ENSMMUG00000003458	RBFOX1	100	99.761	ENSCANG00000033125	RBFOX1	100	99.761	Colobus_angolensis_palliatus
ENSMMUG00000003458	RBFOX1	100	97.368	ENSCGRG00001013729	Rbfox1	100	97.368	Cricetulus_griseus_chok1gshd
ENSMMUG00000003458	RBFOX1	100	97.368	ENSCGRG00000003272	Rbfox1	100	97.368	Cricetulus_griseus_crigri
ENSMMUG00000003458	RBFOX1	93	76.216	ENSCSEG00000008840	rbfox1	100	76.216	Cynoglossus_semilaevis
ENSMMUG00000003458	RBFOX1	97	88.154	ENSDARG00000014746	rbfox1	99	87.912	Danio_rerio
ENSMMUG00000003458	RBFOX1	97	98.177	ENSDNOG00000043612	RBFOX1	93	98.177	Dasypus_novemcinctus
ENSMMUG00000003458	RBFOX1	97	95.866	ENSDORG00000010024	Rbfox1	100	93.059	Dipodomys_ordii
ENSMMUG00000003458	RBFOX1	100	78.708	ENSETEG00000003771	RBFOX1	100	78.708	Echinops_telfairi
ENSMMUG00000003458	RBFOX1	99	97.003	ENSEASG00005011599	RBFOX1	98	98.974	Equus_asinus_asinus
ENSMMUG00000003458	RBFOX1	99	98.916	ENSECAG00000012667	RBFOX1	98	98.916	Equus_caballus
ENSMMUG00000003458	RBFOX1	83	73.832	ENSELUG00000013096	rbfox1	99	64.050	Esox_lucius
ENSMMUG00000003458	RBFOX1	100	98.977	ENSFCAG00000025322	RBFOX1	100	98.977	Felis_catus
ENSMMUG00000003458	RBFOX1	87	95.356	ENSFALG00000004027	RBFOX1	100	93.093	Ficedula_albicollis
ENSMMUG00000003458	RBFOX1	100	97.608	ENSFDAG00000007388	RBFOX1	100	97.608	Fukomys_damarensis
ENSMMUG00000003458	RBFOX1	99	95.355	ENSGALG00000034325	RBFOX1	100	93.541	Gallus_gallus
ENSMMUG00000003458	RBFOX1	99	94.809	ENSGAGG00000023681	RBFOX1	100	95.225	Gopherus_agassizii
ENSMMUG00000003458	RBFOX1	100	99.785	ENSGGOG00000016871	-	100	99.785	Gorilla_gorilla
ENSMMUG00000003458	RBFOX1	100	97.368	ENSHGLG00000016944	RBFOX1	100	97.368	Heterocephalus_glaber_female
ENSMMUG00000003458	RBFOX1	100	97.368	ENSHGLG00100003272	RBFOX1	100	97.368	Heterocephalus_glaber_male
ENSMMUG00000003458	RBFOX1	83	76.562	ENSHCOG00000016419	rbfox1	91	76.562	Hippocampus_comes
ENSMMUG00000003458	RBFOX1	93	90.571	ENSIPUG00000015215	rbfox1	100	90.571	Ictalurus_punctatus
ENSMMUG00000003458	RBFOX1	99	97.826	ENSSTOG00000000322	RBFOX1	100	96.651	Ictidomys_tridecemlineatus
ENSMMUG00000003458	RBFOX1	100	94.498	ENSJJAG00000002575	Rbfox1	100	94.498	Jaculus_jaculus
ENSMMUG00000003458	RBFOX1	93	78.533	ENSLBEG00000014659	rbfox1	97	78.533	Labrus_bergylta
ENSMMUG00000003458	RBFOX1	97	87.339	ENSLOCG00000006675	rbfox1	99	85.787	Lepisosteus_oculatus
ENSMMUG00000003458	RBFOX1	78	99.026	ENSLAFG00000011480	RBFOX1	100	99.351	Loxodonta_africana
ENSMMUG00000003458	RBFOX1	100	100.000	ENSMFAG00000036447	RBFOX1	100	100.000	Macaca_fascicularis
ENSMMUG00000003458	RBFOX1	100	100.000	ENSMNEG00000032034	RBFOX1	100	100.000	Macaca_nemestrina
ENSMMUG00000003458	RBFOX1	100	99.761	ENSMLEG00000015382	RBFOX1	100	99.775	Mandrillus_leucophaeus
ENSMMUG00000003458	RBFOX1	93	80.548	ENSMAMG00000003142	rbfox1	100	81.096	Mastacembelus_armatus
ENSMMUG00000003458	RBFOX1	77	90.141	ENSMGAG00000008606	RBFOX1	96	89.964	Meleagris_gallopavo
ENSMMUG00000003458	RBFOX1	99	57.614	ENSMAUG00000020570	Rbfox1	99	56.599	Mesocricetus_auratus
ENSMMUG00000003458	RBFOX1	100	98.977	ENSMICG00000034286	RBFOX1	100	98.977	Microcebus_murinus
ENSMMUG00000003458	RBFOX1	100	97.368	ENSMOCG00000020932	Rbfox1	100	97.917	Microtus_ochrogaster
ENSMMUG00000003458	RBFOX1	84	77.044	ENSMMOG00000009716	rbfox1	86	77.885	Mola_mola
ENSMMUG00000003458	RBFOX1	96	97.458	ENSMODG00000005826	RBFOX1	100	97.458	Monodelphis_domestica
ENSMMUG00000003458	RBFOX1	97	81.915	ENSMALG00000003337	rbfox1	98	81.600	Monopterus_albus
ENSMMUG00000003458	RBFOX1	100	97.838	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.608	Mus_caroli
ENSMMUG00000003458	RBFOX1	100	97.368	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSMMUG00000003458	RBFOX1	100	97.608	MGP_PahariEiJ_G0016135	Rbfox1	100	97.608	Mus_pahari
ENSMMUG00000003458	RBFOX1	100	97.297	MGP_SPRETEiJ_G0021321	Rbfox1	100	97.129	Mus_spretus
ENSMMUG00000003458	RBFOX1	99	98.907	ENSMPUG00000014822	RBFOX1	93	98.907	Mustela_putorius_furo
ENSMMUG00000003458	RBFOX1	78	99.674	ENSMLUG00000015896	RBFOX1	100	99.674	Myotis_lucifugus
ENSMMUG00000003458	RBFOX1	100	97.847	ENSNGAG00000023276	Rbfox1	100	97.847	Nannospalax_galili
ENSMMUG00000003458	RBFOX1	100	61.429	ENSNBRG00000011084	rbfox1	98	61.429	Neolamprologus_brichardi
ENSMMUG00000003458	RBFOX1	100	99.522	ENSNLEG00000010017	-	100	99.522	Nomascus_leucogenys
ENSMMUG00000003458	RBFOX1	100	80.383	ENSMEUG00000012525	RBFOX1	100	80.383	Notamacropus_eugenii
ENSMMUG00000003458	RBFOX1	88	96.957	ENSOPRG00000006199	-	100	80.144	Ochotona_princeps
ENSMMUG00000003458	RBFOX1	100	97.368	ENSODEG00000013166	RBFOX1	100	97.368	Octodon_degus
ENSMMUG00000003458	RBFOX1	99	96.477	ENSOANG00000002379	RBFOX1	98	96.477	Ornithorhynchus_anatinus
ENSMMUG00000003458	RBFOX1	59	97.235	ENSOCUG00000001205	-	100	94.667	Oryctolagus_cuniculus
ENSMMUG00000003458	RBFOX1	97	99.479	ENSOGAG00000025535	RBFOX1	97	99.479	Otolemur_garnettii
ENSMMUG00000003458	RBFOX1	66	86.475	ENSOARG00000005135	RBFOX1	99	92.641	Ovis_aries
ENSMMUG00000003458	RBFOX1	100	99.744	ENSPPAG00000036238	-	100	99.744	Pan_paniscus
ENSMMUG00000003458	RBFOX1	100	98.977	ENSPPRG00000006546	RBFOX1	100	98.977	Panthera_pardus
ENSMMUG00000003458	RBFOX1	97	87.240	ENSPTIG00000021154	RBFOX1	98	86.234	Panthera_tigris_altaica
ENSMMUG00000003458	RBFOX1	100	99.785	ENSPTRG00000007744	RBFOX1	100	99.785	Pan_troglodytes
ENSMMUG00000003458	RBFOX1	100	99.785	ENSPANG00000026500	RBFOX1	100	99.785	Papio_anubis
ENSMMUG00000003458	RBFOX1	97	89.315	ENSPKIG00000009667	-	95	90.909	Paramormyrops_kingsleyae
ENSMMUG00000003458	RBFOX1	71	92.857	ENSPKIG00000019353	rbfox1	86	92.453	Paramormyrops_kingsleyae
ENSMMUG00000003458	RBFOX1	99	92.658	ENSPSIG00000006523	RBFOX1	99	92.658	Pelodiscus_sinensis
ENSMMUG00000003458	RBFOX1	100	97.608	ENSPEMG00000017607	Rbfox1	100	97.608	Peromyscus_maniculatus_bairdii
ENSMMUG00000003458	RBFOX1	73	92.759	ENSPCIG00000026887	RBFOX1	100	92.759	Phascolarctos_cinereus
ENSMMUG00000003458	RBFOX1	99	99.727	ENSPPYG00000007079	-	93	99.727	Pongo_abelii
ENSMMUG00000003458	RBFOX1	90	89.418	ENSPCAG00000002630	RBFOX1	100	89.418	Procavia_capensis
ENSMMUG00000003458	RBFOX1	100	98.804	ENSPCOG00000025687	RBFOX1	100	98.804	Propithecus_coquereli
ENSMMUG00000003458	RBFOX1	100	93.780	ENSPVAG00000013467	RBFOX1	100	93.780	Pteropus_vampyrus
ENSMMUG00000003458	RBFOX1	93	87.568	ENSPNAG00000023109	rbfox1	100	87.568	Pygocentrus_nattereri
ENSMMUG00000003458	RBFOX1	100	94.976	ENSRNOG00000002827	Rbfox1	100	94.976	Rattus_norvegicus
ENSMMUG00000003458	RBFOX1	99	99.729	ENSRBIG00000044478	RBFOX1	100	99.758	Rhinopithecus_bieti
ENSMMUG00000003458	RBFOX1	100	99.761	ENSRROG00000044411	RBFOX1	100	99.761	Rhinopithecus_roxellana
ENSMMUG00000003458	RBFOX1	100	99.233	ENSSBOG00000033726	RBFOX1	100	99.233	Saimiri_boliviensis_boliviensis
ENSMMUG00000003458	RBFOX1	99	91.392	ENSSHAG00000009257	RBFOX1	99	91.392	Sarcophilus_harrisii
ENSMMUG00000003458	RBFOX1	97	77.624	ENSSFOG00015023675	rbfox1	97	86.667	Scleropages_formosus
ENSMMUG00000003458	RBFOX1	89	73.761	ENSSFOG00015009955	-	87	73.761	Scleropages_formosus
ENSMMUG00000003458	RBFOX1	97	82.152	ENSSMAG00000015505	rbfox1	93	81.890	Scophthalmus_maximus
ENSMMUG00000003458	RBFOX1	97	79.620	ENSSDUG00000016413	rbfox1	99	79.726	Seriola_dumerili
ENSMMUG00000003458	RBFOX1	83	78.594	ENSSLDG00000009353	rbfox1	95	78.146	Seriola_lalandi_dorsalis
ENSMMUG00000003458	RBFOX1	83	90.096	ENSSPUG00000009732	RBFOX1	87	90.096	Sphenodon_punctatus
ENSMMUG00000003458	RBFOX1	100	78.042	ENSSPAG00000009723	rbfox1	100	81.003	Stegastes_partitus
ENSMMUG00000003458	RBFOX1	99	96.196	ENSSSCG00000007917	RBFOX1	100	98.588	Sus_scrofa
ENSMMUG00000003458	RBFOX1	97	95.052	ENSTGUG00000004562	RBFOX1	99	95.052	Taeniopygia_guttata
ENSMMUG00000003458	RBFOX1	97	80.739	ENSTRUG00000020940	rbfox1	99	81.003	Takifugu_rubripes
ENSMMUG00000003458	RBFOX1	64	62.718	ENSTNIG00000002567	rbfox1	100	64.460	Tetraodon_nigroviridis
ENSMMUG00000003458	RBFOX1	81	89.655	ENSTBEG00000009169	-	81	89.655	Tupaia_belangeri
ENSMMUG00000003458	RBFOX1	100	97.847	ENSTTRG00000005700	RBFOX1	100	97.847	Tursiops_truncatus
ENSMMUG00000003458	RBFOX1	99	94.550	ENSUAMG00000024633	RBFOX1	97	94.517	Ursus_americanus
ENSMMUG00000003458	RBFOX1	99	85.014	ENSUMAG00000003579	RBFOX1	97	85.379	Ursus_maritimus
ENSMMUG00000003458	RBFOX1	81	99.351	ENSVPAG00000001284	RBFOX1	81	99.351	Vicugna_pacos
ENSMMUG00000003458	RBFOX1	99	99.187	ENSVVUG00000017311	RBFOX1	98	99.187	Vulpes_vulpes