EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000004015 (Gene tree)
Gene ID: 721047
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 10516 bases
Position: chr10:80955268-80965783
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000014096	APOBEC_N	PF08210.11	2.1e-100	1	2
ENSMMUP00000014096	APOBEC_N	PF08210.11	2.1e-100	2	2
ENSMMUP00000057520	APOBEC_N	PF08210.11	5.3e-100	1	2
ENSMMUP00000057520	APOBEC_N	PF08210.11	5.3e-100	2	2
ENSMMUP00000014095	APOBEC_N	PF08210.11	1.8e-48	1	1
ENSMMUP00000051816	APOBEC_N	PF08210.11	2.2e-48	1	1
ENSMMUP00000014096	APOBEC_C	PF05240.14	1.5e-62	1	2
ENSMMUP00000014096	APOBEC_C	PF05240.14	1.5e-62	2	2
ENSMMUP00000057520	APOBEC_C	PF05240.14	3e-62	1	2
ENSMMUP00000057520	APOBEC_C	PF05240.14	3e-62	2	2
ENSMMUP00000014095	APOBEC_C	PF05240.14	7.5e-31	1	1
ENSMMUP00000051816	APOBEC_C	PF05240.14	8.2e-31	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000015043	-	591	-	ENSMMUP00000014095	196 (aa)	-	F7FXK1
ENSMMUT00000063166	-	633	-	ENSMMUP00000051816	210 (aa)	-	A0A1D5QUT6
ENSMMUT00000015044	-	1155	-	ENSMMUP00000014096	384 (aa)	-	F7FXJ2
ENSMMUT00000066576	-	1422	XM_015150379	ENSMMUP00000057520	473 (aa)	-	A0A1D5RB29

Gene Model

Click here to download ENSMMUG00000004015's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc05170	Human immunodeficiency virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000004015's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000004015	-	98	63.613	ENSMMUG00000004017	APOBEC3F	100	64.660
ENSMMUG00000004015	-	97	48.108	ENSMMUG00000004018	APOBEC3C	95	48.370
ENSMMUG00000004015	-	98	88.542	ENSMMUG00000042504	APOBEC3A	97	86.667
ENSMMUG00000004015	-	98	67.708	ENSMMUG00000039346	APOBEC3G	97	67.196
ENSMMUG00000004015	-	97	44.041	ENSMMUG00000019134	AICDA	97	42.857
ENSMMUG00000004015	-	94	31.892	ENSMMUG00000021171	APOBEC2	86	31.707
ENSMMUG00000004015	-	98	33.990	ENSMMUG00000001016	APOBEC3H	90	33.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000004015	-	98	85.417	ENSG00000179750	APOBEC3B	99	84.392	Homo_sapiens
ENSMMUG00000004015	-	98	83.854	ENSG00000128383	APOBEC3A	95	83.854	Homo_sapiens
ENSMMUG00000004015	-	97	55.495	ENSCJAG00000012500	-	98	55.495	Callithrix_jacchus
ENSMMUG00000004015	-	97	61.579	ENSTSYG00000035593	-	97	61.376	Carlito_syrichta
ENSMMUG00000004015	-	98	67.708	ENSCCAG00000027450	-	96	67.708	Cebus_capucinus
ENSMMUG00000004015	-	99	92.188	ENSCATG00000013527	-	100	87.551	Cercocebus_atys
ENSMMUG00000004015	-	75	85.714	ENSCSAG00000018401	-	70	85.714	Chlorocebus_sabaeus
ENSMMUG00000004015	-	99	88.542	ENSCSAG00000006445	-	100	86.327	Chlorocebus_sabaeus
ENSMMUG00000004015	-	98	90.625	ENSCANG00000030513	-	98	90.526	Colobus_angolensis_palliatus
ENSMMUG00000004015	-	98	82.812	ENSGGOG00000006721	APOBEC3B	99	82.275	Gorilla_gorilla
ENSMMUG00000004015	-	100	94.359	ENSMFAG00000008980	APOBEC3A	99	95.361	Macaca_fascicularis
ENSMMUG00000004015	-	98	95.152	ENSMNEG00000043211	-	95	96.364	Macaca_nemestrina
ENSMMUG00000004015	-	98	93.386	ENSMLEG00000004809	-	99	94.444	Mandrillus_leucophaeus
ENSMMUG00000004015	-	99	82.487	ENSNLEG00000015215	-	99	81.443	Nomascus_leucogenys
ENSMMUG00000004015	-	98	86.458	ENSPPAG00000009288	APOBEC3B	99	86.243	Pan_paniscus
ENSMMUG00000004015	-	98	81.771	ENSPTRG00000014384	APOBEC3B	95	81.771	Pan_troglodytes
ENSMMUG00000004015	-	98	95.455	ENSPANG00000006941	APOBEC3B	97	88.205	Papio_anubis
ENSMMUG00000004015	-	98	83.289	ENSPPYG00000011831	-	99	84.350	Pongo_abelii
ENSMMUG00000004015	-	77	60.135	ENSPCOG00000017606	-	97	60.135	Propithecus_coquereli
ENSMMUG00000004015	-	98	90.104	ENSRBIG00000042829	-	99	89.947	Rhinopithecus_bieti
ENSMMUG00000004015	-	98	90.104	ENSRROG00000028773	APOBEC3G	99	89.947	Rhinopithecus_roxellana