EuRBPDB

Description
Ensembl ID
ENSMMUG00000004017 (Gene tree)
Gene ID
723812
Gene Symbol
APOBEC3F
Alias
-
Full Name
apolipoprotein B mRNA editing enzyme catalytic subunit 3D
Gene Type
protein_coding
Species
Macaca_mulatta
Status
putative
Strand
Plus strand
Length
35040 bases
Position
chr10:80993980-81029019
Accession
705996
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein ID
Domain
Pfam ID
E-value
Domain number
Total number
ENSMMUP00000041921APOBEC_NPF08210.112e-10912
ENSMMUP00000041921APOBEC_NPF08210.112e-10922
ENSMMUP00000005361APOBEC_NPF08210.111.2e-10712
ENSMMUP00000005361APOBEC_NPF08210.111.2e-10722
ENSMMUP00000051127APOBEC_NPF08210.111.6e-10512
ENSMMUP00000051127APOBEC_NPF08210.111.6e-10522
ENSMMUP00000056423APOBEC_NPF08210.111.7e-10512
ENSMMUP00000056423APOBEC_NPF08210.111.7e-10522
ENSMMUP00000047292APOBEC_NPF08210.111.6e-10312
ENSMMUP00000047292APOBEC_NPF08210.111.6e-10322
ENSMMUP00000005360APOBEC_NPF08210.113.7e-5811
ENSMMUP00000051127APOBEC_CPF05240.143.4e-6512
ENSMMUP00000051127APOBEC_CPF05240.143.4e-6522
ENSMMUP00000056423APOBEC_CPF05240.143.5e-6512
ENSMMUP00000056423APOBEC_CPF05240.143.5e-6522
ENSMMUP00000047292APOBEC_CPF05240.143.9e-6512
ENSMMUP00000047292APOBEC_CPF05240.143.9e-6522
ENSMMUP00000005361APOBEC_CPF05240.141.2e-6412
ENSMMUP00000005361APOBEC_CPF05240.141.2e-6422
ENSMMUP00000041921APOBEC_CPF05240.142.1e-6412
ENSMMUP00000041921APOBEC_CPF05240.142.1e-6422
ENSMMUP00000005360APOBEC_CPF05240.143.4e-3311
Transcripts
Transcript ID
Name
Length
RefSeq ID
Protein ID
Length
RefSeq ID
UniportKB ID
ENSMMUT00000065156-1146-ENSMMUP00000047292381 (aa)-A0A1D5QGX2
ENSMMUT00000077690-4506-ENSMMUP00000041921374 (aa)-A0A1D5Q1K9
ENSMMUT00000005693-585-ENSMMUP00000005360194 (aa)-F6XHB3
ENSMMUT00000005694-1182XM_001094328ENSMMUP00000005361393 (aa)XP_015005864F6XHA6
ENSMMUT00000061599-1128-ENSMMUP00000056423375 (aa)-A0A1D5R7Y3
ENSMMUT00000076462-5099XM_015150346ENSMMUP00000051127371 (aa)XP_015005832A0A1D5QSU9
Gene Model
Pathways
Pathway ID
Pathway Name
Source
mcc05170Human immunodeficiency virus 1 infectionKEGG
mcc05170Human immunodeficiency virus 1 infectionKEGG
Protein-Protein Interaction (PPI)
Paralogs
Ensembl ID
Gene Symbol
Coverage
Identiy
Paralog
Gene Symbol
Coverage
Identiy
ENSMMUG00000004017APOBEC3F9744.253ENSMMUG00000019134AICDA9444.118
ENSMMUG00000004017APOBEC3F10032.836ENSMMUG00000021171APOBEC28833.831
ENSMMUG00000004017APOBEC3F10064.660ENSMMUG00000004015-9863.613
ENSMMUG00000004017APOBEC3F10076.289ENSMMUG00000004018APOBEC3C10076.289
ENSMMUG00000004017APOBEC3F9941.361ENSMMUG00000042504APOBEC3A9541.361
ENSMMUG00000004017APOBEC3F9535.795ENSMMUG00000001016APOBEC3H9234.043
ENSMMUG00000004017APOBEC3F10044.330ENSMMUG00000039346APOBEC3G9744.330
Orthologs
Ensembl ID
Gene Symbol
Coverage
Identiy
Ortholog
Gene Symbol
Coverage
Identiy
Species
ENSMMUG00000004017APOBEC3F9987.263ENSG00000128394APOBEC3F10087.263Homo_sapiens
ENSMMUG00000004017APOBEC3F10077.419ENSG00000244509APOBEC3C10077.419Homo_sapiens
ENSMMUG00000004017APOBEC3F10077.419ENSG00000243811APOBEC3D10077.419Homo_sapiens
ENSMMUG00000004017APOBEC3F9972.654ENSANAG00000030088-9972.654Aotus_nancymaae
ENSMMUG00000004017APOBEC3F7167.424ENSCJAG00000015317-10068.939Callithrix_jacchus
ENSMMUG00000004017APOBEC3F9950.802ENSCAFG00020002615-9950.802Canis_lupus_dingo
ENSMMUG00000004017APOBEC3F9856.831ENSTSYG00000028254-9956.831Carlito_syrichta
ENSMMUG00000004017APOBEC3F9954.645ENSTSYG00000034260-9854.645Carlito_syrichta
ENSMMUG00000004017APOBEC3F9851.913ENSTSYG00000030036-9951.913Carlito_syrichta
ENSMMUG00000004017APOBEC3F9967.895ENSCCAG00000030932-8667.895Cebus_capucinus
ENSMMUG00000004017APOBEC3F9996.196ENSCATG00000033502-9993.478Cercocebus_atys
ENSMMUG00000004017APOBEC3F10073.656ENSCATG00000043226APOBEC3C10073.656Cercocebus_atys
ENSMMUG00000004017APOBEC3F10075.269ENSCSAG00000006402APOBEC3C10075.269Chlorocebus_sabaeus
ENSMMUG00000004017APOBEC3F10090.642ENSCSAG00000006382APOBEC3F9991.892Chlorocebus_sabaeus
ENSMMUG00000004017APOBEC3F9989.130ENSCANG00000033269-10089.130Colobus_angolensis_palliatus
ENSMMUG00000004017APOBEC3F9975.269ENSCANG00000039177APOBEC3C10073.656Colobus_angolensis_palliatus
ENSMMUG00000004017APOBEC3F9990.786ENSCANG00000032904-10091.033Colobus_angolensis_palliatus
ENSMMUG00000004017APOBEC3F10085.027ENSCANG00000031957-10085.027Colobus_angolensis_palliatus
ENSMMUG00000004017APOBEC3F9441.935ENSDNOG00000044642-9741.935Dasypus_novemcinctus
ENSMMUG00000004017APOBEC3F10048.469ENSEASG00005018641-10048.469Equus_asinus_asinus
ENSMMUG00000004017APOBEC3F10050.270ENSECAG00000006071-9851.351Equus_caballus
ENSMMUG00000004017APOBEC3F9985.908ENSGGOG00000038678APOBEC3F10085.908Gorilla_gorilla
ENSMMUG00000004017APOBEC3F10077.419ENSGGOG00000036587-10077.419Gorilla_gorilla
ENSMMUG00000004017APOBEC3F9944.565ENSHGLG00000017315-9443.478Heterocephalus_glaber_female
ENSMMUG00000004017APOBEC3F9944.474ENSHGLG00100003105-9444.474Heterocephalus_glaber_male
ENSMMUG00000004017APOBEC3F10091.392ENSMFAG00000002331-10091.392Macaca_fascicularis
ENSMMUG00000004017APOBEC3F10076.882ENSMFAG00000016792APOBEC3C10076.882Macaca_fascicularis
ENSMMUG00000004017APOBEC3F9996.486ENSMFAG00000004037APOBEC3F9998.919Macaca_fascicularis
ENSMMUG00000004017APOBEC3F10096.709ENSMNEG00000043316APOBEC3D10096.709Macaca_nemestrina
ENSMMUG00000004017APOBEC3F9974.731ENSMNEG00000045196APOBEC3C10073.656Macaca_nemestrina
ENSMMUG00000004017APOBEC3F9993.514ENSMLEG00000029642APOBEC3F9995.135Mandrillus_leucophaeus
ENSMMUG00000004017APOBEC3F10074.194ENSMLEG00000036992APOBEC3C10074.194Mandrillus_leucophaeus
ENSMMUG00000004017APOBEC3F9954.595ENSMICG00000042615-9052.973Microcebus_murinus
ENSMMUG00000004017APOBEC3F9945.550ENSMLUG00000023676-9948.677Myotis_lucifugus
ENSMMUG00000004017APOBEC3F10076.684ENSNLEG00000035811-10076.684Nomascus_leucogenys
ENSMMUG00000004017APOBEC3F10074.194ENSNLEG00000028392APOBEC3C10074.194Nomascus_leucogenys
ENSMMUG00000004017APOBEC3F9947.568ENSOGAG00000032498-9947.568Otolemur_garnettii
ENSMMUG00000004017APOBEC3F10042.932ENSOGAG00000033404-9945.251Otolemur_garnettii
ENSMMUG00000004017APOBEC3F9944.974ENSOGAG00000030300-9944.974Otolemur_garnettii
ENSMMUG00000004017APOBEC3F10078.495ENSPPAG00000014118APOBEC3C10078.495Pan_paniscus
ENSMMUG00000004017APOBEC3F9977.215ENSPPAG00000028218-10075.269Pan_paniscus
ENSMMUG00000004017APOBEC3F9949.457ENSPPRG00000003726-9849.457Panthera_pardus
ENSMMUG00000004017APOBEC3F10075.190ENSPTRG00000041588APOBEC3D10075.190Pan_troglodytes
ENSMMUG00000004017APOBEC3F9987.263ENSPTRG00000014385APOBEC3C10087.263Pan_troglodytes
ENSMMUG00000004017APOBEC3F9991.160ENSPANG00000010775APOBEC3F10091.160Papio_anubis
ENSMMUG00000004017APOBEC3F10074.194ENSPPYG00000011832APOBEC3C10074.194Pongo_abelii
ENSMMUG00000004017APOBEC3F6859.200ENSPCOG00000018072-10059.200Propithecus_coquereli
ENSMMUG00000004017APOBEC3F6857.364ENSPCOG00000022067-9857.364Propithecus_coquereli
ENSMMUG00000004017APOBEC3F9050.407ENSPVAG00000009461-7350.407Pteropus_vampyrus
ENSMMUG00000004017APOBEC3F10083.770ENSRBIG00000030834-10083.770Rhinopithecus_bieti
ENSMMUG00000004017APOBEC3F9990.884ENSRBIG00000030323-10090.884Rhinopithecus_bieti
ENSMMUG00000004017APOBEC3F9591.111ENSRBIG00000042297-10091.720Rhinopithecus_bieti
ENSMMUG00000004017APOBEC3F9990.270ENSRROG00000029045APOBEC3C10090.489Rhinopithecus_roxellana
ENSMMUG00000004017APOBEC3F10083.246ENSRROG00000028557-10083.246Rhinopithecus_roxellana
ENSMMUG00000004017APOBEC3F9590.556ENSRROG00000029996-9890.556Rhinopithecus_roxellana
ENSMMUG00000004017APOBEC3F9970.588ENSSBOG00000032780-10070.588Saimiri_boliviensis_boliviensis
ENSMMUG00000004017APOBEC3F9846.409ENSUAMG00000004433-10046.409Ursus_americanus
ENSMMUG00000004017APOBEC3F9847.283ENSUMAG00000014441-8647.283Ursus_maritimus
ENSMMUG00000004017APOBEC3F8053.020ENSVVUG00000014628-9152.740Vulpes_vulpes