EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000004181 (Gene tree)
Gene ID: 707835
Gene Symbol: PNLDC1
Alias: FLJ40240|dJ195P10.2
Full Name: PARN like%2C ribonuclease domain containing 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 21299 bases
Position: chr4:160914795-160936093
Accession: 707835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000044803	CAF1	PF04857.20	7.5e-79	1	1
ENSMMUP00000005596	CAF1	PF04857.20	1.1e-70	1	1
ENSMMUP00000057984	CAF1	PF04857.20	9.3e-43	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000057513	PNLDC1-201	2073	XM_015137628	ENSMMUP00000044803	531 (aa)	XP_014993114	A0A1D5Q9T5
ENSMMUT00000073252	PNLDC1-202	915	-	ENSMMUP00000057984	304 (aa)	-	A0A1D5RCE2
ENSMMUT00000005941	PNLDC1-203	1587	-	ENSMMUP00000005596	528 (aa)	-	F6X2Q9

Gene Model

Click here to download ENSMMUG00000004181's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000004181's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000004181	PNLDC1	99	96.415	ENSG00000146453	PNLDC1	99	96.415	Homo_sapiens
ENSMMUG00000004181	PNLDC1	99	86.932	ENSAMEG00000015371	PNLDC1	99	86.932	Ailuropoda_melanoleuca
ENSMMUG00000004181	PNLDC1	99	56.415	ENSAPLG00000007014	PNLDC1	99	56.415	Anas_platyrhynchos
ENSMMUG00000004181	PNLDC1	99	60.075	ENSACAG00000013667	PNLDC1	99	60.075	Anolis_carolinensis
ENSMMUG00000004181	PNLDC1	100	93.220	ENSANAG00000034713	PNLDC1	100	93.346	Aotus_nancymaae
ENSMMUG00000004181	PNLDC1	98	86.602	ENSBTAG00000015166	PNLDC1	97	86.705	Bos_taurus
ENSMMUG00000004181	PNLDC1	100	92.467	ENSCJAG00000011865	PNLDC1	100	92.467	Callithrix_jacchus
ENSMMUG00000004181	PNLDC1	100	87.947	ENSCAFG00000000740	PNLDC1	100	87.947	Canis_familiaris
ENSMMUG00000004181	PNLDC1	100	85.929	ENSCAFG00020017742	PNLDC1	94	92.089	Canis_lupus_dingo
ENSMMUG00000004181	PNLDC1	100	85.338	ENSCHIG00000003141	PNLDC1	100	85.338	Capra_hircus
ENSMMUG00000004181	PNLDC1	100	88.701	ENSTSYG00000005606	PNLDC1	100	88.701	Carlito_syrichta
ENSMMUG00000004181	PNLDC1	100	61.959	ENSCAPG00000011893	PNLDC1	100	61.959	Cavia_aperea
ENSMMUG00000004181	PNLDC1	100	79.135	ENSCPOG00000019565	PNLDC1	100	79.135	Cavia_porcellus
ENSMMUG00000004181	PNLDC1	100	93.597	ENSCCAG00000026232	PNLDC1	100	93.597	Cebus_capucinus
ENSMMUG00000004181	PNLDC1	100	98.870	ENSCATG00000033196	PNLDC1	100	98.870	Cercocebus_atys
ENSMMUG00000004181	PNLDC1	99	84.528	ENSCLAG00000003228	PNLDC1	99	84.528	Chinchilla_lanigera
ENSMMUG00000004181	PNLDC1	100	96.604	ENSCSAG00000012478	PNLDC1	100	96.604	Chlorocebus_sabaeus
ENSMMUG00000004181	PNLDC1	96	65.820	ENSCPBG00000004050	PNLDC1	100	65.820	Chrysemys_picta_bellii
ENSMMUG00000004181	PNLDC1	100	95.833	ENSCANG00000043076	PNLDC1	100	95.833	Colobus_angolensis_palliatus
ENSMMUG00000004181	PNLDC1	100	65.913	ENSCGRG00001011981	-	99	65.913	Cricetulus_griseus_chok1gshd
ENSMMUG00000004181	PNLDC1	100	81.356	ENSCGRG00001007470	-	99	81.356	Cricetulus_griseus_chok1gshd
ENSMMUG00000004181	PNLDC1	100	67.985	ENSCGRG00000003103	-	99	67.985	Cricetulus_griseus_crigri
ENSMMUG00000004181	PNLDC1	100	81.356	ENSCGRG00000010221	-	99	81.356	Cricetulus_griseus_crigri
ENSMMUG00000004181	PNLDC1	100	85.714	ENSDNOG00000013709	PNLDC1	100	85.714	Dasypus_novemcinctus
ENSMMUG00000004181	PNLDC1	100	80.337	ENSDORG00000011517	Pnldc1	99	87.220	Dipodomys_ordii
ENSMMUG00000004181	PNLDC1	94	74.648	ENSETEG00000007587	PNLDC1	99	74.899	Echinops_telfairi
ENSMMUG00000004181	PNLDC1	100	80.331	ENSEASG00005019029	PNLDC1	100	80.331	Equus_asinus_asinus
ENSMMUG00000004181	PNLDC1	100	89.077	ENSECAG00000012898	PNLDC1	100	89.077	Equus_caballus
ENSMMUG00000004181	PNLDC1	68	81.250	ENSEEUG00000005717	-	86	81.250	Erinaceus_europaeus
ENSMMUG00000004181	PNLDC1	100	87.947	ENSFCAG00000002848	PNLDC1	100	87.947	Felis_catus
ENSMMUG00000004181	PNLDC1	96	55.969	ENSFALG00000012081	PNLDC1	99	56.660	Ficedula_albicollis
ENSMMUG00000004181	PNLDC1	100	84.934	ENSFDAG00000021334	PNLDC1	100	84.934	Fukomys_damarensis
ENSMMUG00000004181	PNLDC1	86	54.580	ENSGALG00000011624	PNLDC1	82	58.195	Gallus_gallus
ENSMMUG00000004181	PNLDC1	99	66.415	ENSGAGG00000015276	PNLDC1	100	67.355	Gopherus_agassizii
ENSMMUG00000004181	PNLDC1	100	96.234	ENSGGOG00000014077	PNLDC1	100	96.234	Gorilla_gorilla
ENSMMUG00000004181	PNLDC1	100	85.687	ENSHGLG00000006889	PNLDC1	100	85.687	Heterocephalus_glaber_female
ENSMMUG00000004181	PNLDC1	100	85.687	ENSHGLG00100018275	PNLDC1	100	85.687	Heterocephalus_glaber_male
ENSMMUG00000004181	PNLDC1	99	88.847	ENSSTOG00000005595	PNLDC1	99	88.847	Ictidomys_tridecemlineatus
ENSMMUG00000004181	PNLDC1	100	80.038	ENSJJAG00000009937	Pnldc1	99	80.038	Jaculus_jaculus
ENSMMUG00000004181	PNLDC1	86	85.441	ENSLAFG00000030189	PNLDC1	92	85.714	Loxodonta_africana
ENSMMUG00000004181	PNLDC1	100	100.000	ENSMFAG00000041296	PNLDC1	100	100.000	Macaca_fascicularis
ENSMMUG00000004181	PNLDC1	100	99.812	ENSMNEG00000034271	PNLDC1	100	99.812	Macaca_nemestrina
ENSMMUG00000004181	PNLDC1	100	95.480	ENSMLEG00000044059	PNLDC1	100	95.480	Mandrillus_leucophaeus
ENSMMUG00000004181	PNLDC1	98	57.253	ENSMGAG00000012470	PNLDC1	97	57.874	Meleagris_gallopavo
ENSMMUG00000004181	PNLDC1	99	66.729	ENSMAUG00000012298	Pnldc1	100	66.729	Mesocricetus_auratus
ENSMMUG00000004181	PNLDC1	100	88.136	ENSMICG00000008021	PNLDC1	100	88.136	Microcebus_murinus
ENSMMUG00000004181	PNLDC1	100	86.116	ENSMOCG00000014287	Pnldc1	100	86.116	Microtus_ochrogaster
ENSMMUG00000004181	PNLDC1	99	75.047	ENSMODG00000007420	PNLDC1	99	75.047	Monodelphis_domestica
ENSMMUG00000004181	PNLDC1	100	85.499	MGP_CAROLIEiJ_G0021045	Pnldc1	100	85.499	Mus_caroli
ENSMMUG00000004181	PNLDC1	100	85.876	ENSMUSG00000073460	Pnldc1	100	89.524	Mus_musculus
ENSMMUG00000004181	PNLDC1	100	86.064	MGP_PahariEiJ_G0023361	Pnldc1	100	86.064	Mus_pahari
ENSMMUG00000004181	PNLDC1	100	85.687	MGP_SPRETEiJ_G0021975	Pnldc1	100	85.687	Mus_spretus
ENSMMUG00000004181	PNLDC1	99	86.415	ENSMPUG00000004920	PNLDC1	99	86.415	Mustela_putorius_furo
ENSMMUG00000004181	PNLDC1	100	87.194	ENSMLUG00000000747	PNLDC1	100	87.194	Myotis_lucifugus
ENSMMUG00000004181	PNLDC1	100	87.194	ENSNGAG00000017714	Pnldc1	99	87.194	Nannospalax_galili
ENSMMUG00000004181	PNLDC1	100	93.371	ENSNLEG00000011282	PNLDC1	100	93.371	Nomascus_leucogenys
ENSMMUG00000004181	PNLDC1	59	64.045	ENSMEUG00000014042	-	100	67.361	Notamacropus_eugenii
ENSMMUG00000004181	PNLDC1	61	63.125	ENSMEUG00000011926	-	64	63.125	Notamacropus_eugenii
ENSMMUG00000004181	PNLDC1	79	86.096	ENSOPRG00000003813	PNLDC1	79	86.096	Ochotona_princeps
ENSMMUG00000004181	PNLDC1	100	83.804	ENSODEG00000008047	PNLDC1	100	83.804	Octodon_degus
ENSMMUG00000004181	PNLDC1	99	57.547	ENSOANG00000012199	PNLDC1	99	59.811	Ornithorhynchus_anatinus
ENSMMUG00000004181	PNLDC1	100	87.006	ENSOCUG00000013867	PNLDC1	100	87.006	Oryctolagus_cuniculus
ENSMMUG00000004181	PNLDC1	63	30.144	ENSOMEG00000019555	parn	92	30.144	Oryzias_melastigma
ENSMMUG00000004181	PNLDC1	99	89.036	ENSOGAG00000007331	PNLDC1	100	89.036	Otolemur_garnettii
ENSMMUG00000004181	PNLDC1	100	85.311	ENSOARG00000004585	PNLDC1	100	85.311	Ovis_aries
ENSMMUG00000004181	PNLDC1	100	95.857	ENSPPAG00000026651	PNLDC1	100	95.857	Pan_paniscus
ENSMMUG00000004181	PNLDC1	100	87.947	ENSPPRG00000012854	PNLDC1	100	87.947	Panthera_pardus
ENSMMUG00000004181	PNLDC1	99	83.333	ENSPTIG00000011501	PNLDC1	99	83.333	Panthera_tigris_altaica
ENSMMUG00000004181	PNLDC1	100	95.857	ENSPTRG00000018762	PNLDC1	100	95.857	Pan_troglodytes
ENSMMUG00000004181	PNLDC1	100	99.812	ENSPANG00000022009	PNLDC1	100	99.812	Papio_anubis
ENSMMUG00000004181	PNLDC1	77	61.538	ENSPSIG00000011419	PNLDC1	99	55.385	Pelodiscus_sinensis
ENSMMUG00000004181	PNLDC1	100	86.252	ENSPEMG00000016301	Pnldc1	99	86.252	Peromyscus_maniculatus_bairdii
ENSMMUG00000004181	PNLDC1	86	30.223	ENSPMAG00000003956	parn	90	30.426	Petromyzon_marinus
ENSMMUG00000004181	PNLDC1	85	74.944	ENSPCIG00000023412	PNLDC1	100	76.082	Phascolarctos_cinereus
ENSMMUG00000004181	PNLDC1	100	88.722	ENSPPYG00000017148	PNLDC1	100	88.722	Pongo_abelii
ENSMMUG00000004181	PNLDC1	99	75.947	ENSPCAG00000014169	PNLDC1	99	75.947	Procavia_capensis
ENSMMUG00000004181	PNLDC1	100	88.701	ENSPCOG00000025722	PNLDC1	100	88.701	Propithecus_coquereli
ENSMMUG00000004181	PNLDC1	86	91.188	ENSPVAG00000005325	PNLDC1	73	90.909	Pteropus_vampyrus
ENSMMUG00000004181	PNLDC1	100	85.499	ENSRNOG00000023140	Pnldc1	100	86.250	Rattus_norvegicus
ENSMMUG00000004181	PNLDC1	72	30.126	ENSRNOG00000002912	Parn	80	38.889	Rattus_norvegicus
ENSMMUG00000004181	PNLDC1	100	98.870	ENSRBIG00000033806	PNLDC1	100	98.870	Rhinopithecus_bieti
ENSMMUG00000004181	PNLDC1	100	96.780	ENSRROG00000043919	PNLDC1	100	96.780	Rhinopithecus_roxellana
ENSMMUG00000004181	PNLDC1	100	93.597	ENSSBOG00000019135	PNLDC1	100	93.597	Saimiri_boliviensis_boliviensis
ENSMMUG00000004181	PNLDC1	97	74.903	ENSSHAG00000015192	PNLDC1	97	76.634	Sarcophilus_harrisii
ENSMMUG00000004181	PNLDC1	77	61.966	ENSSPUG00000004627	PNLDC1	99	66.071	Sphenodon_punctatus
ENSMMUG00000004181	PNLDC1	99	84.453	ENSSSCG00000004046	PNLDC1	100	84.453	Sus_scrofa
ENSMMUG00000004181	PNLDC1	93	56.998	ENSTGUG00000011418	PNLDC1	99	57.732	Taeniopygia_guttata
ENSMMUG00000004181	PNLDC1	99	76.820	ENSTBEG00000009131	PNLDC1	98	77.843	Tupaia_belangeri
ENSMMUG00000004181	PNLDC1	86	88.506	ENSTTRG00000010409	PNLDC1	73	82.642	Tursiops_truncatus
ENSMMUG00000004181	PNLDC1	99	74.815	ENSUAMG00000015783	PNLDC1	99	74.815	Ursus_americanus
ENSMMUG00000004181	PNLDC1	97	78.764	ENSUMAG00000011903	PNLDC1	99	80.196	Ursus_maritimus
ENSMMUG00000004181	PNLDC1	96	88.845	ENSVVUG00000006586	PNLDC1	99	88.090	Vulpes_vulpes