EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000004243 (Gene tree)
Gene ID: 711396
Gene Symbol: TRMT13
Alias: CCDC76
Full Name: tRNA methyltransferase 13 homolog
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 17267 bases
Position: chr1:101004541-101021807
Accession: 711396
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000005664	TRM13	PF05206.14	2.8e-92	1	1
ENSMMUP00000056721	zf-U11-48K	PF05253.12	8e-10	1	1
ENSMMUP00000005664	zf-U11-48K	PF05253.12	4.1e-09	1	1
ENSMMUP00000056721	zf-TRM13_CCCH	PF11722.8	5.3e-14	1	1
ENSMMUP00000005664	zf-TRM13_CCCH	PF11722.8	7.9e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000006017	-	3132	-	ENSMMUP00000005664	481 (aa)	-	F6YWH7
ENSMMUT00000054990	-	330	-	ENSMMUP00000056721	109 (aa)	-	A0A1D5R8T1

Gene Model

Click here to download ENSMMUG00000004243's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000004243's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000004243	TRMT13	100	97.921	ENSG00000122435	TRMT13	100	97.921	Homo_sapiens
ENSMMUG00000004243	TRMT13	86	60.638	ENSAPOG00000015131	trmt13	99	47.896	Acanthochromis_polyacanthus
ENSMMUG00000004243	TRMT13	100	92.661	ENSAMEG00000008917	TRMT13	100	90.437	Ailuropoda_melanoleuca
ENSMMUG00000004243	TRMT13	99	56.481	ENSACIG00000005804	trmt13	97	51.452	Amphilophus_citrinellus
ENSMMUG00000004243	TRMT13	87	60.000	ENSAOCG00000023585	trmt13	99	49.095	Amphiprion_ocellaris
ENSMMUG00000004243	TRMT13	87	60.000	ENSAPEG00000004025	trmt13	99	48.708	Amphiprion_percula
ENSMMUG00000004243	TRMT13	87	65.263	ENSATEG00000006597	trmt13	97	51.255	Anabas_testudineus
ENSMMUG00000004243	TRMT13	88	66.667	ENSAPLG00000014924	TRMT13	99	66.667	Anas_platyrhynchos
ENSMMUG00000004243	TRMT13	96	63.793	ENSACAG00000003498	TRMT13	98	63.793	Anolis_carolinensis
ENSMMUG00000004243	TRMT13	100	99.083	ENSANAG00000019525	TRMT13	100	99.083	Aotus_nancymaae
ENSMMUG00000004243	TRMT13	96	53.178	ENSACLG00000020018	trmt13	99	53.178	Astatotilapia_calliptera
ENSMMUG00000004243	TRMT13	83	66.667	ENSAMXG00000017963	trmt13	97	55.032	Astyanax_mexicanus
ENSMMUG00000004243	TRMT13	100	90.644	ENSBTAG00000015781	TRMT13	100	90.644	Bos_taurus
ENSMMUG00000004243	TRMT13	100	99.083	ENSCJAG00000000200	TRMT13	99	99.083	Callithrix_jacchus
ENSMMUG00000004243	TRMT13	65	91.720	ENSCAFG00000020021	TRMT13	99	91.720	Canis_familiaris
ENSMMUG00000004243	TRMT13	100	88.182	ENSCAFG00020011572	TRMT13	95	92.308	Canis_lupus_dingo
ENSMMUG00000004243	TRMT13	100	90.852	ENSCHIG00000015395	TRMT13	100	90.852	Capra_hircus
ENSMMUG00000004243	TRMT13	98	82.452	ENSTSYG00000010811	TRMT13	98	87.879	Carlito_syrichta
ENSMMUG00000004243	TRMT13	75	69.041	ENSCAPG00000009085	TRMT13	100	69.589	Cavia_aperea
ENSMMUG00000004243	TRMT13	100	88.991	ENSCPOG00000000694	TRMT13	100	88.981	Cavia_porcellus
ENSMMUG00000004243	TRMT13	100	98.165	ENSCCAG00000023772	TRMT13	100	98.165	Cebus_capucinus
ENSMMUG00000004243	TRMT13	100	99.083	ENSCATG00000033556	TRMT13	100	99.083	Cercocebus_atys
ENSMMUG00000004243	TRMT13	89	84.543	ENSCLAG00000008220	TRMT13	100	85.480	Chinchilla_lanigera
ENSMMUG00000004243	TRMT13	100	99.168	ENSCSAG00000001506	TRMT13	100	99.168	Chlorocebus_sabaeus
ENSMMUG00000004243	TRMT13	99	68.958	ENSCPBG00000026671	TRMT13	99	68.958	Chrysemys_picta_bellii
ENSMMUG00000004243	TRMT13	100	100.000	ENSCANG00000034659	TRMT13	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000004243	TRMT13	99	85.239	ENSCGRG00001021601	Trmt13	99	85.239	Cricetulus_griseus_chok1gshd
ENSMMUG00000004243	TRMT13	53	82.490	ENSCGRG00000000093	-	99	82.490	Cricetulus_griseus_crigri
ENSMMUG00000004243	TRMT13	98	48.414	ENSCSEG00000000591	trmt13	99	48.414	Cynoglossus_semilaevis
ENSMMUG00000004243	TRMT13	95	48.643	ENSCVAG00000017342	trmt13	93	49.474	Cyprinodon_variegatus
ENSMMUG00000004243	TRMT13	95	57.634	ENSDARG00000102846	trmt13	96	57.634	Danio_rerio
ENSMMUG00000004243	TRMT13	100	84.071	ENSDNOG00000001710	TRMT13	84	88.768	Dasypus_novemcinctus
ENSMMUG00000004243	TRMT13	100	88.991	ENSDORG00000015808	Trmt13	99	87.318	Dipodomys_ordii
ENSMMUG00000004243	TRMT13	95	31.237	FBgn0037435	CG18048	94	31.237	Drosophila_melanogaster
ENSMMUG00000004243	TRMT13	99	85.714	ENSETEG00000005819	TRMT13	99	75.783	Echinops_telfairi
ENSMMUG00000004243	TRMT13	95	45.591	ENSEBUG00000014444	trmt13	96	45.671	Eptatretus_burgeri
ENSMMUG00000004243	TRMT13	100	95.413	ENSEASG00005015918	TRMT13	100	92.723	Equus_asinus_asinus
ENSMMUG00000004243	TRMT13	100	95.413	ENSECAG00000022626	TRMT13	100	93.139	Equus_caballus
ENSMMUG00000004243	TRMT13	96	85.714	ENSEEUG00000000294	TRMT13	80	81.329	Erinaceus_europaeus
ENSMMUG00000004243	TRMT13	96	56.652	ENSELUG00000003803	trmt13	98	56.438	Esox_lucius
ENSMMUG00000004243	TRMT13	100	93.578	ENSFCAG00000030618	TRMT13	100	93.578	Felis_catus
ENSMMUG00000004243	TRMT13	100	66.055	ENSFALG00000002424	TRMT13	99	63.808	Ficedula_albicollis
ENSMMUG00000004243	TRMT13	100	91.743	ENSFDAG00000006342	TRMT13	99	90.756	Fukomys_damarensis
ENSMMUG00000004243	TRMT13	83	57.778	ENSFHEG00000022954	trmt13	97	51.621	Fundulus_heteroclitus
ENSMMUG00000004243	TRMT13	95	49.011	ENSGMOG00000013223	trmt13	100	49.451	Gadus_morhua
ENSMMUG00000004243	TRMT13	95	65.495	ENSGALG00000005290	TRMT13	98	64.756	Gallus_gallus
ENSMMUG00000004243	TRMT13	85	56.383	ENSGAFG00000001577	trmt13	81	51.075	Gambusia_affinis
ENSMMUG00000004243	TRMT13	89	59.794	ENSGACG00000013428	trmt13	100	50.000	Gasterosteus_aculeatus
ENSMMUG00000004243	TRMT13	100	68.880	ENSGAGG00000023303	TRMT13	99	73.091	Gopherus_agassizii
ENSMMUG00000004243	TRMT13	100	97.297	ENSGGOG00000005616	TRMT13	100	97.297	Gorilla_gorilla
ENSMMUG00000004243	TRMT13	96	53.390	ENSHBUG00000007754	trmt13	99	53.390	Haplochromis_burtoni
ENSMMUG00000004243	TRMT13	100	92.661	ENSHGLG00000002164	TRMT13	99	91.387	Heterocephalus_glaber_female
ENSMMUG00000004243	TRMT13	100	92.661	ENSHGLG00100001618	TRMT13	99	91.387	Heterocephalus_glaber_male
ENSMMUG00000004243	TRMT13	96	48.069	ENSHCOG00000020553	trmt13	98	48.069	Hippocampus_comes
ENSMMUG00000004243	TRMT13	95	56.833	ENSIPUG00000024787	trmt13	98	58.009	Ictalurus_punctatus
ENSMMUG00000004243	TRMT13	100	94.495	ENSSTOG00000013483	TRMT13	100	93.763	Ictidomys_tridecemlineatus
ENSMMUG00000004243	TRMT13	99	88.445	ENSJJAG00000018012	Trmt13	100	87.917	Jaculus_jaculus
ENSMMUG00000004243	TRMT13	64	49.679	ENSKMAG00000007639	trmt13	92	49.679	Kryptolebias_marmoratus
ENSMMUG00000004243	TRMT13	87	64.211	ENSLBEG00000020238	trmt13	99	51.775	Labrus_bergylta
ENSMMUG00000004243	TRMT13	96	62.284	ENSLACG00000013153	TRMT13	100	61.194	Latimeria_chalumnae
ENSMMUG00000004243	TRMT13	95	64.423	ENSLOCG00000000418	trmt13	99	57.906	Lepisosteus_oculatus
ENSMMUG00000004243	TRMT13	77	88.108	ENSLAFG00000002383	TRMT13	100	88.108	Loxodonta_africana
ENSMMUG00000004243	TRMT13	100	100.000	ENSMFAG00000034681	TRMT13	100	100.000	Macaca_fascicularis
ENSMMUG00000004243	TRMT13	100	100.000	ENSMNEG00000036102	TRMT13	100	100.000	Macaca_nemestrina
ENSMMUG00000004243	TRMT13	100	99.083	ENSMLEG00000034258	TRMT13	100	99.083	Mandrillus_leucophaeus
ENSMMUG00000004243	TRMT13	96	51.477	ENSMAMG00000016597	trmt13	98	51.477	Mastacembelus_armatus
ENSMMUG00000004243	TRMT13	96	52.966	ENSMZEG00005020959	trmt13	99	52.966	Maylandia_zebra
ENSMMUG00000004243	TRMT13	89	66.276	ENSMGAG00000006970	TRMT13	100	66.276	Meleagris_gallopavo
ENSMMUG00000004243	TRMT13	100	84.404	ENSMAUG00000010448	Trmt13	99	84.167	Mesocricetus_auratus
ENSMMUG00000004243	TRMT13	100	93.971	ENSMICG00000005283	TRMT13	100	93.971	Microcebus_murinus
ENSMMUG00000004243	TRMT13	100	84.404	ENSMOCG00000019914	Trmt13	99	81.667	Microtus_ochrogaster
ENSMMUG00000004243	TRMT13	72	53.165	ENSMMOG00000007762	trmt13	89	50.943	Mola_mola
ENSMMUG00000004243	TRMT13	100	76.991	ENSMODG00000003646	TRMT13	100	76.132	Monodelphis_domestica
ENSMMUG00000004243	TRMT13	94	56.311	ENSMALG00000020965	trmt13	97	50.756	Monopterus_albus
ENSMMUG00000004243	TRMT13	99	87.963	MGP_CAROLIEiJ_G0025568	Trmt13	94	92.262	Mus_caroli
ENSMMUG00000004243	TRMT13	99	86.164	ENSMUSG00000033439	Trmt13	94	92.262	Mus_musculus
ENSMMUG00000004243	TRMT13	99	87.037	MGP_PahariEiJ_G0027014	Trmt13	99	87.002	Mus_pahari
ENSMMUG00000004243	TRMT13	99	87.037	MGP_SPRETEiJ_G0026518	Trmt13	94	92.262	Mus_spretus
ENSMMUG00000004243	TRMT13	100	90.826	ENSMPUG00000012169	-	98	89.474	Mustela_putorius_furo
ENSMMUG00000004243	TRMT13	79	88.451	ENSMPUG00000002078	-	100	88.451	Mustela_putorius_furo
ENSMMUG00000004243	TRMT13	100	91.743	ENSMLUG00000002124	TRMT13	100	79.418	Myotis_lucifugus
ENSMMUG00000004243	TRMT13	97	53.774	ENSNBRG00000006783	trmt13	97	49.057	Neolamprologus_brichardi
ENSMMUG00000004243	TRMT13	100	97.921	ENSNLEG00000035917	TRMT13	100	97.921	Nomascus_leucogenys
ENSMMUG00000004243	TRMT13	100	58.182	ENSMEUG00000013346	-	100	73.387	Notamacropus_eugenii
ENSMMUG00000004243	TRMT13	100	88.073	ENSOPRG00000012048	TRMT13	67	90.441	Ochotona_princeps
ENSMMUG00000004243	TRMT13	100	89.908	ENSODEG00000006075	-	95	90.419	Octodon_degus
ENSMMUG00000004243	TRMT13	96	53.178	ENSONIG00000004574	trmt13	99	53.178	Oreochromis_niloticus
ENSMMUG00000004243	TRMT13	89	74.478	ENSOANG00000012057	TRMT13	99	74.478	Ornithorhynchus_anatinus
ENSMMUG00000004243	TRMT13	100	91.892	ENSOCUG00000023095	TRMT13	100	91.892	Oryctolagus_cuniculus
ENSMMUG00000004243	TRMT13	96	48.620	ENSORLG00000003320	trmt13	99	49.257	Oryzias_latipes
ENSMMUG00000004243	TRMT13	97	48.319	ENSORLG00020005972	trmt13	97	48.529	Oryzias_latipes_hni
ENSMMUG00000004243	TRMT13	96	52.553	ENSORLG00015002270	trmt13	99	52.553	Oryzias_latipes_hsok
ENSMMUG00000004243	TRMT13	97	51.586	ENSOMEG00000006724	trmt13	94	52.128	Oryzias_melastigma
ENSMMUG00000004243	TRMT13	100	92.661	ENSOGAG00000005618	TRMT13	97	92.308	Otolemur_garnettii
ENSMMUG00000004243	TRMT13	100	90.852	ENSOARG00000017983	TRMT13	100	90.852	Ovis_aries
ENSMMUG00000004243	TRMT13	100	97.297	ENSPPAG00000043736	TRMT13	100	97.297	Pan_paniscus
ENSMMUG00000004243	TRMT13	100	93.578	ENSPPRG00000003424	TRMT13	100	93.578	Panthera_pardus
ENSMMUG00000004243	TRMT13	100	93.578	ENSPTIG00000018598	TRMT13	100	93.578	Panthera_tigris_altaica
ENSMMUG00000004243	TRMT13	100	97.297	ENSPTRG00000001001	TRMT13	100	97.297	Pan_troglodytes
ENSMMUG00000004243	TRMT13	100	100.000	ENSPANG00000007598	TRMT13	100	100.000	Papio_anubis
ENSMMUG00000004243	TRMT13	96	56.957	ENSPKIG00000001514	trmt13	98	56.957	Paramormyrops_kingsleyae
ENSMMUG00000004243	TRMT13	86	69.065	ENSPSIG00000012703	TRMT13	99	69.065	Pelodiscus_sinensis
ENSMMUG00000004243	TRMT13	85	64.516	ENSPMGG00000013298	trmt13	94	51.820	Periophthalmus_magnuspinnatus
ENSMMUG00000004243	TRMT13	100	84.404	ENSPEMG00000000275	Trmt13	99	83.542	Peromyscus_maniculatus_bairdii
ENSMMUG00000004243	TRMT13	88	55.000	ENSPMAG00000000823	trmt13	97	45.359	Petromyzon_marinus
ENSMMUG00000004243	TRMT13	99	75.884	ENSPCIG00000007699	TRMT13	99	76.507	Phascolarctos_cinereus
ENSMMUG00000004243	TRMT13	99	49.375	ENSPFOG00000008675	trmt13	99	49.375	Poecilia_formosa
ENSMMUG00000004243	TRMT13	95	49.469	ENSPLAG00000009709	trmt13	99	49.469	Poecilia_latipinna
ENSMMUG00000004243	TRMT13	95	48.077	ENSPMEG00000022954	trmt13	99	48.077	Poecilia_mexicana
ENSMMUG00000004243	TRMT13	88	56.000	ENSPREG00000005645	trmt13	91	50.719	Poecilia_reticulata
ENSMMUG00000004243	TRMT13	100	97.505	ENSPPYG00000001120	TRMT13	100	97.505	Pongo_abelii
ENSMMUG00000004243	TRMT13	100	88.073	ENSPCAG00000002340	TRMT13	100	87.942	Procavia_capensis
ENSMMUG00000004243	TRMT13	100	93.578	ENSPCOG00000017984	TRMT13	100	93.578	Propithecus_coquereli
ENSMMUG00000004243	TRMT13	100	91.684	ENSPVAG00000017430	TRMT13	100	91.684	Pteropus_vampyrus
ENSMMUG00000004243	TRMT13	96	51.695	ENSPNYG00000013690	trmt13	99	51.695	Pundamilia_nyererei
ENSMMUG00000004243	TRMT13	94	65.049	ENSPNAG00000022130	trmt13	99	55.649	Pygocentrus_nattereri
ENSMMUG00000004243	TRMT13	100	85.321	ENSRNOG00000015140	Trmt13	96	85.774	Rattus_norvegicus
ENSMMUG00000004243	TRMT13	100	100.000	ENSRBIG00000037686	TRMT13	100	100.000	Rhinopithecus_bieti
ENSMMUG00000004243	TRMT13	100	100.000	ENSRROG00000044057	TRMT13	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000004243	TRMT13	100	99.083	ENSSBOG00000026541	TRMT13	100	99.083	Saimiri_boliviensis_boliviensis
ENSMMUG00000004243	TRMT13	91	77.117	ENSSHAG00000005213	TRMT13	97	77.117	Sarcophilus_harrisii
ENSMMUG00000004243	TRMT13	96	54.741	ENSSFOG00015017560	trmt13	98	55.172	Scleropages_formosus
ENSMMUG00000004243	TRMT13	94	58.824	ENSSMAG00000014592	trmt13	99	50.307	Scophthalmus_maximus
ENSMMUG00000004243	TRMT13	98	56.481	ENSSDUG00000015508	trmt13	99	50.505	Seriola_dumerili
ENSMMUG00000004243	TRMT13	98	56.481	ENSSLDG00000019060	trmt13	98	50.513	Seriola_lalandi_dorsalis
ENSMMUG00000004243	TRMT13	97	85.849	ENSSARG00000010344	TRMT13	99	76.421	Sorex_araneus
ENSMMUG00000004243	TRMT13	96	67.819	ENSSPUG00000016339	TRMT13	100	67.819	Sphenodon_punctatus
ENSMMUG00000004243	TRMT13	95	52.381	ENSSPAG00000011922	trmt13	98	52.463	Stegastes_partitus
ENSMMUG00000004243	TRMT13	100	92.661	ENSSSCG00000006869	TRMT13	100	91.268	Sus_scrofa
ENSMMUG00000004243	TRMT13	97	65.385	ENSTGUG00000005253	TRMT13	100	65.385	Taeniopygia_guttata
ENSMMUG00000004243	TRMT13	90	55.102	ENSTRUG00000008400	trmt13	99	49.474	Takifugu_rubripes
ENSMMUG00000004243	TRMT13	86	75.962	ENSTBEG00000008911	TRMT13	100	75.962	Tupaia_belangeri
ENSMMUG00000004243	TRMT13	70	98.684	ENSTTRG00000015302	-	60	98.684	Tursiops_truncatus
ENSMMUG00000004243	TRMT13	100	89.908	ENSUAMG00000017251	TRMT13	100	85.031	Ursus_americanus
ENSMMUG00000004243	TRMT13	100	91.743	ENSUMAG00000007901	TRMT13	100	90.229	Ursus_maritimus
ENSMMUG00000004243	TRMT13	90	73.611	ENSVPAG00000001034	TRMT13	100	73.611	Vicugna_pacos
ENSMMUG00000004243	TRMT13	99	91.268	ENSVVUG00000021996	TRMT13	99	91.268	Vulpes_vulpes
ENSMMUG00000004243	TRMT13	91	65.657	ENSXETG00000013204	trmt13	96	56.156	Xenopus_tropicalis
ENSMMUG00000004243	TRMT13	87	56.250	ENSXCOG00000008120	-	88	56.250	Xiphophorus_couchianus
ENSMMUG00000004243	TRMT13	95	48.517	ENSXMAG00000010765	trmt13	99	48.517	Xiphophorus_maculatus