EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000005547 (Gene tree)
Gene ID: 715552
Gene Symbol: SF3A1
Alias: -
Full Name: splicing factor 3a subunit 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 24173 bases
Position: chr10:72171076-72195248
Accession: 715552
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000037105	PRP21_like_P	PF12230.8	1.8e-51	1	1
ENSMMUP00000007333	PRP21_like_P	PF12230.8	1.8e-51	1	1
ENSMMUP00000056404	PRP21_like_P	PF12230.8	1.1e-17	1	1
ENSMMUP00000037105	Surp	PF01805.20	1e-45	1	2
ENSMMUP00000037105	Surp	PF01805.20	1e-45	2	2
ENSMMUP00000007333	Surp	PF01805.20	1e-45	1	2
ENSMMUP00000007333	Surp	PF01805.20	1e-45	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000007806	-	5347	-	ENSMMUP00000007333	793 (aa)	-	F7GEU6
ENSMMUT00000063028	-	777	-	ENSMMUP00000056404	259 (aa)	-	A0A1D5R7W4
ENSMMUT00000044099	-	2379	-	ENSMMUP00000037105	792 (aa)	-	F6T8A2

Gene Model

Click here to download ENSMMUG00000005547's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000005547's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000005547	SF3A1	100	99.622	ENSG00000099995	SF3A1	100	99.622	Homo_sapiens
ENSMMUG00000005547	SF3A1	100	83.019	ENSAPOG00000020465	sf3a1	99	84.655	Acanthochromis_polyacanthus
ENSMMUG00000005547	SF3A1	100	98.239	ENSAMEG00000007737	SF3A1	100	98.239	Ailuropoda_melanoleuca
ENSMMUG00000005547	SF3A1	100	84.403	ENSACIG00000020672	sf3a1	98	85.807	Amphilophus_citrinellus
ENSMMUG00000005547	SF3A1	100	82.750	ENSAOCG00000003060	sf3a1	99	84.655	Amphiprion_ocellaris
ENSMMUG00000005547	SF3A1	100	82.875	ENSAPEG00000010735	sf3a1	99	84.783	Amphiprion_percula
ENSMMUG00000005547	SF3A1	97	85.826	ENSATEG00000021201	sf3a1	97	85.013	Anabas_testudineus
ENSMMUG00000005547	SF3A1	95	94.055	ENSAPLG00000009057	SF3A1	99	93.290	Anas_platyrhynchos
ENSMMUG00000005547	SF3A1	100	85.591	ENSACAG00000009415	SF3A1	100	85.049	Anolis_carolinensis
ENSMMUG00000005547	SF3A1	100	99.243	ENSANAG00000032045	SF3A1	100	99.243	Aotus_nancymaae
ENSMMUG00000005547	SF3A1	100	84.257	ENSACLG00000012622	sf3a1	98	86.050	Astatotilapia_calliptera
ENSMMUG00000005547	SF3A1	99	83.312	ENSAMXG00000005382	sf3a1	99	84.190	Astyanax_mexicanus
ENSMMUG00000005547	SF3A1	100	98.991	ENSBTAG00000003390	SF3A1	100	98.991	Bos_taurus
ENSMMUG00000005547	SF3A1	84	43.447	WBGene00004188	prp-21	94	43.502	Caenorhabditis_elegans
ENSMMUG00000005547	SF3A1	100	99.369	ENSCJAG00000010370	SF3A1	100	99.369	Callithrix_jacchus
ENSMMUG00000005547	SF3A1	100	98.739	ENSCAFG00000012559	SF3A1	100	98.739	Canis_familiaris
ENSMMUG00000005547	SF3A1	100	98.739	ENSCAFG00020000838	SF3A1	100	98.739	Canis_lupus_dingo
ENSMMUG00000005547	SF3A1	100	98.865	ENSCHIG00000018642	SF3A1	100	98.865	Capra_hircus
ENSMMUG00000005547	SF3A1	100	98.991	ENSTSYG00000004739	SF3A1	100	98.991	Carlito_syrichta
ENSMMUG00000005547	SF3A1	100	89.575	ENSCAPG00000015414	SF3A1	98	81.150	Cavia_aperea
ENSMMUG00000005547	SF3A1	100	98.613	ENSCPOG00000014589	SF3A1	100	98.613	Cavia_porcellus
ENSMMUG00000005547	SF3A1	100	99.243	ENSCCAG00000032006	SF3A1	100	99.243	Cebus_capucinus
ENSMMUG00000005547	SF3A1	100	99.748	ENSCATG00000029241	SF3A1	100	99.748	Cercocebus_atys
ENSMMUG00000005547	SF3A1	100	98.487	ENSCLAG00000006508	SF3A1	100	98.487	Chinchilla_lanigera
ENSMMUG00000005547	SF3A1	100	99.874	ENSCSAG00000009470	SF3A1	100	99.874	Chlorocebus_sabaeus
ENSMMUG00000005547	SF3A1	61	100.000	ENSCHOG00000005201	SF3A1	69	100.000	Choloepus_hoffmanni
ENSMMUG00000005547	SF3A1	100	90.932	ENSCPBG00000007595	SF3A1	100	91.058	Chrysemys_picta_bellii
ENSMMUG00000005547	SF3A1	94	52.513	ENSCING00000008526	-	66	58.254	Ciona_intestinalis
ENSMMUG00000005547	SF3A1	96	51.613	ENSCSAVG00000005608	-	92	62.712	Ciona_savignyi
ENSMMUG00000005547	SF3A1	100	99.874	ENSCANG00000033564	SF3A1	100	99.874	Colobus_angolensis_palliatus
ENSMMUG00000005547	SF3A1	100	98.361	ENSCGRG00001008933	Sf3a1	100	98.361	Cricetulus_griseus_chok1gshd
ENSMMUG00000005547	SF3A1	100	98.361	ENSCGRG00000006127	Sf3a1	100	98.361	Cricetulus_griseus_crigri
ENSMMUG00000005547	SF3A1	100	81.658	ENSCSEG00000010792	sf3a1	99	82.051	Cynoglossus_semilaevis
ENSMMUG00000005547	SF3A1	100	83.019	ENSCVAG00000004560	sf3a1	98	84.245	Cyprinodon_variegatus
ENSMMUG00000005547	SF3A1	100	82.412	ENSDARG00000041887	sf3a1	97	84.746	Danio_rerio
ENSMMUG00000005547	SF3A1	100	98.616	ENSDNOG00000010629	SF3A1	100	98.616	Dasypus_novemcinctus
ENSMMUG00000005547	SF3A1	100	98.865	ENSDORG00000005613	Sf3a1	100	98.865	Dipodomys_ordii
ENSMMUG00000005547	SF3A1	83	60.211	FBgn0266917	Sf3a1	85	59.571	Drosophila_melanogaster
ENSMMUG00000005547	SF3A1	100	83.553	ENSETEG00000017194	SF3A1	100	94.729	Echinops_telfairi
ENSMMUG00000005547	SF3A1	98	66.223	ENSEBUG00000001285	sf3a1	96	66.790	Eptatretus_burgeri
ENSMMUG00000005547	SF3A1	100	99.117	ENSEASG00005010254	SF3A1	100	99.117	Equus_asinus_asinus
ENSMMUG00000005547	SF3A1	100	99.117	ENSECAG00000023962	SF3A1	100	99.117	Equus_caballus
ENSMMUG00000005547	SF3A1	90	81.588	ENSEEUG00000003159	SF3A1	82	95.082	Erinaceus_europaeus
ENSMMUG00000005547	SF3A1	100	82.206	ENSELUG00000022578	sf3a1	98	83.077	Esox_lucius
ENSMMUG00000005547	SF3A1	100	98.739	ENSFCAG00000011932	SF3A1	100	98.739	Felis_catus
ENSMMUG00000005547	SF3A1	95	93.122	ENSFALG00000006944	SF3A1	100	91.814	Ficedula_albicollis
ENSMMUG00000005547	SF3A1	100	98.865	ENSFDAG00000009560	SF3A1	100	98.865	Fukomys_damarensis
ENSMMUG00000005547	SF3A1	100	84.151	ENSFHEG00000010866	sf3a1	98	85.417	Fundulus_heteroclitus
ENSMMUG00000005547	SF3A1	100	81.360	ENSGMOG00000016024	sf3a1	99	80.612	Gadus_morhua
ENSMMUG00000005547	SF3A1	95	94.048	ENSGALG00000007937	SF3A1	100	92.317	Gallus_gallus
ENSMMUG00000005547	SF3A1	100	83.145	ENSGAFG00000009111	sf3a1	99	83.397	Gambusia_affinis
ENSMMUG00000005547	SF3A1	100	82.746	ENSGACG00000011893	sf3a1	97	83.770	Gasterosteus_aculeatus
ENSMMUG00000005547	SF3A1	96	90.802	ENSGAGG00000000762	SF3A1	99	90.933	Gopherus_agassizii
ENSMMUG00000005547	SF3A1	100	99.622	ENSGGOG00000012631	SF3A1	100	99.622	Gorilla_gorilla
ENSMMUG00000005547	SF3A1	100	84.257	ENSHBUG00000015795	sf3a1	98	86.050	Haplochromis_burtoni
ENSMMUG00000005547	SF3A1	100	98.865	ENSHGLG00000007907	SF3A1	100	98.865	Heterocephalus_glaber_female
ENSMMUG00000005547	SF3A1	100	98.865	ENSHGLG00100013799	SF3A1	100	98.865	Heterocephalus_glaber_male
ENSMMUG00000005547	SF3A1	100	80.126	ENSHCOG00000015423	sf3a1	99	80.645	Hippocampus_comes
ENSMMUG00000005547	SF3A1	96	82.552	ENSIPUG00000002470	sf3a1	98	82.812	Ictalurus_punctatus
ENSMMUG00000005547	SF3A1	100	98.991	ENSSTOG00000013892	SF3A1	100	98.991	Ictidomys_tridecemlineatus
ENSMMUG00000005547	SF3A1	100	98.741	ENSJJAG00000022566	Sf3a1	100	98.741	Jaculus_jaculus
ENSMMUG00000005547	SF3A1	100	82.767	ENSKMAG00000002400	sf3a1	98	84.766	Kryptolebias_marmoratus
ENSMMUG00000005547	SF3A1	100	82.767	ENSLBEG00000022974	sf3a1	99	83.355	Labrus_bergylta
ENSMMUG00000005547	SF3A1	100	86.951	ENSLACG00000003565	SF3A1	97	88.411	Latimeria_chalumnae
ENSMMUG00000005547	SF3A1	100	84.962	ENSLOCG00000008251	sf3a1	97	86.753	Lepisosteus_oculatus
ENSMMUG00000005547	SF3A1	100	98.991	ENSLAFG00000000448	SF3A1	100	98.991	Loxodonta_africana
ENSMMUG00000005547	SF3A1	98	62.293	ENSLAFG00000026032	-	98	61.783	Loxodonta_africana
ENSMMUG00000005547	SF3A1	100	100.000	ENSMFAG00000031979	SF3A1	100	100.000	Macaca_fascicularis
ENSMMUG00000005547	SF3A1	100	99.874	ENSMNEG00000037229	SF3A1	100	99.874	Macaca_nemestrina
ENSMMUG00000005547	SF3A1	100	99.874	ENSMLEG00000041908	SF3A1	100	99.874	Mandrillus_leucophaeus
ENSMMUG00000005547	SF3A1	97	85.511	ENSMAMG00000006460	sf3a1	97	85.640	Mastacembelus_armatus
ENSMMUG00000005547	SF3A1	100	84.257	ENSMZEG00005009633	sf3a1	98	86.050	Maylandia_zebra
ENSMMUG00000005547	SF3A1	95	94.048	ENSMGAG00000001330	SF3A1	99	93.282	Meleagris_gallopavo
ENSMMUG00000005547	SF3A1	92	94.945	ENSMAUG00000020317	Sf3a1	94	94.945	Mesocricetus_auratus
ENSMMUG00000005547	SF3A1	100	99.243	ENSMICG00000010038	SF3A1	100	99.243	Microcebus_murinus
ENSMMUG00000005547	SF3A1	100	98.487	ENSMOCG00000008438	Sf3a1	100	98.487	Microtus_ochrogaster
ENSMMUG00000005547	SF3A1	100	81.635	ENSMMOG00000015588	sf3a1	98	82.239	Mola_mola
ENSMMUG00000005547	SF3A1	100	97.604	ENSMODG00000009270	SF3A1	100	97.604	Monodelphis_domestica
ENSMMUG00000005547	SF3A1	100	84.383	ENSMALG00000000148	sf3a1	99	85.967	Monopterus_albus
ENSMMUG00000005547	SF3A1	100	98.235	MGP_CAROLIEiJ_G0016029	Sf3a1	100	98.235	Mus_caroli
ENSMMUG00000005547	SF3A1	100	98.235	ENSMUSG00000002129	Sf3a1	100	98.235	Mus_musculus
ENSMMUG00000005547	SF3A1	100	97.982	MGP_PahariEiJ_G0016862	Sf3a1	100	97.982	Mus_pahari
ENSMMUG00000005547	SF3A1	100	98.235	MGP_SPRETEiJ_G0016870	Sf3a1	100	98.235	Mus_spretus
ENSMMUG00000005547	SF3A1	100	98.739	ENSMPUG00000013144	SF3A1	100	98.739	Mustela_putorius_furo
ENSMMUG00000005547	SF3A1	100	98.865	ENSMLUG00000002139	SF3A1	100	98.865	Myotis_lucifugus
ENSMMUG00000005547	SF3A1	100	98.739	ENSNGAG00000016977	Sf3a1	100	98.739	Nannospalax_galili
ENSMMUG00000005547	SF3A1	100	84.509	ENSNBRG00000016642	sf3a1	96	86.693	Neolamprologus_brichardi
ENSMMUG00000005547	SF3A1	100	99.874	ENSNLEG00000003686	SF3A1	100	99.874	Nomascus_leucogenys
ENSMMUG00000005547	SF3A1	96	87.763	ENSMEUG00000008741	SF3A1	100	87.763	Notamacropus_eugenii
ENSMMUG00000005547	SF3A1	100	98.108	ENSOPRG00000016636	SF3A1	100	98.108	Ochotona_princeps
ENSMMUG00000005547	SF3A1	100	98.865	ENSODEG00000002571	SF3A1	100	98.865	Octodon_degus
ENSMMUG00000005547	SF3A1	100	84.151	ENSONIG00000010848	sf3a1	98	85.417	Oreochromis_niloticus
ENSMMUG00000005547	SF3A1	51	94.656	ENSOANG00000029886	-	63	95.312	Ornithorhynchus_anatinus
ENSMMUG00000005547	SF3A1	100	98.487	ENSOCUG00000007633	SF3A1	100	98.487	Oryctolagus_cuniculus
ENSMMUG00000005547	SF3A1	96	81.890	ENSORLG00000013050	sf3a1	99	83.445	Oryzias_latipes
ENSMMUG00000005547	SF3A1	99	80.253	ENSORLG00020003236	sf3a1	94	83.578	Oryzias_latipes_hni
ENSMMUG00000005547	SF3A1	100	82.138	ENSORLG00015017411	sf3a1	99	83.742	Oryzias_latipes_hsok
ENSMMUG00000005547	SF3A1	100	82.642	ENSOMEG00000013362	sf3a1	99	83.484	Oryzias_melastigma
ENSMMUG00000005547	SF3A1	100	99.117	ENSOGAG00000012931	SF3A1	100	99.117	Otolemur_garnettii
ENSMMUG00000005547	SF3A1	100	97.100	ENSOARG00000006849	SF3A1	100	97.100	Ovis_aries
ENSMMUG00000005547	SF3A1	100	98.613	ENSPPAG00000041790	SF3A1	100	98.613	Pan_paniscus
ENSMMUG00000005547	SF3A1	100	98.739	ENSPPRG00000004391	SF3A1	100	98.739	Panthera_pardus
ENSMMUG00000005547	SF3A1	97	98.705	ENSPTIG00000000844	SF3A1	100	98.705	Panthera_tigris_altaica
ENSMMUG00000005547	SF3A1	100	99.622	ENSPTRG00000014240	SF3A1	100	99.622	Pan_troglodytes
ENSMMUG00000005547	SF3A1	100	99.874	ENSPANG00000020772	SF3A1	100	99.874	Papio_anubis
ENSMMUG00000005547	SF3A1	83	94.505	ENSPSIG00000012803	SF3A1	96	94.505	Pelodiscus_sinensis
ENSMMUG00000005547	SF3A1	96	84.293	ENSPMGG00000023096	sf3a1	100	84.293	Periophthalmus_magnuspinnatus
ENSMMUG00000005547	SF3A1	100	98.613	ENSPEMG00000009494	Sf3a1	100	98.613	Peromyscus_maniculatus_bairdii
ENSMMUG00000005547	SF3A1	69	77.858	ENSPMAG00000007139	-	90	79.252	Petromyzon_marinus
ENSMMUG00000005547	SF3A1	100	97.352	ENSPCIG00000022692	SF3A1	100	97.352	Phascolarctos_cinereus
ENSMMUG00000005547	SF3A1	100	75.251	ENSPFOG00000016768	sf3a1	93	78.912	Poecilia_formosa
ENSMMUG00000005547	SF3A1	100	83.522	ENSPLAG00000017268	sf3a1	97	85.098	Poecilia_latipinna
ENSMMUG00000005547	SF3A1	84	85.994	ENSPMEG00000019811	sf3a1	98	85.241	Poecilia_mexicana
ENSMMUG00000005547	SF3A1	100	83.648	ENSPREG00000010347	sf3a1	97	85.490	Poecilia_reticulata
ENSMMUG00000005547	SF3A1	100	99.874	ENSPPYG00000011707	SF3A1	100	99.874	Pongo_abelii
ENSMMUG00000005547	SF3A1	69	100.000	ENSPCAG00000003266	SF3A1	57	99.528	Procavia_capensis
ENSMMUG00000005547	SF3A1	100	99.243	ENSPCOG00000026630	SF3A1	100	99.243	Propithecus_coquereli
ENSMMUG00000005547	SF3A1	100	94.578	ENSPVAG00000017719	SF3A1	94	97.987	Pteropus_vampyrus
ENSMMUG00000005547	SF3A1	100	84.257	ENSPNYG00000018706	sf3a1	98	86.050	Pundamilia_nyererei
ENSMMUG00000005547	SF3A1	98	83.969	ENSPNAG00000003721	sf3a1	98	85.176	Pygocentrus_nattereri
ENSMMUG00000005547	SF3A1	100	98.108	ENSRNOG00000005218	Sf3a1	100	98.108	Rattus_norvegicus
ENSMMUG00000005547	SF3A1	100	99.748	ENSRBIG00000032167	SF3A1	100	99.748	Rhinopithecus_bieti
ENSMMUG00000005547	SF3A1	100	99.748	ENSRROG00000044908	SF3A1	100	99.748	Rhinopithecus_roxellana
ENSMMUG00000005547	SF3A1	97	95.090	ENSSBOG00000021960	SF3A1	100	99.261	Saimiri_boliviensis_boliviensis
ENSMMUG00000005547	SF3A1	99	93.291	ENSSHAG00000003666	SF3A1	98	94.955	Sarcophilus_harrisii
ENSMMUG00000005547	SF3A1	100	83.125	ENSSFOG00015004579	sf3a1	99	84.872	Scleropages_formosus
ENSMMUG00000005547	SF3A1	100	81.635	ENSSMAG00000004275	sf3a1	99	81.877	Scophthalmus_maximus
ENSMMUG00000005547	SF3A1	100	83.500	ENSSDUG00000022219	sf3a1	99	84.399	Seriola_dumerili
ENSMMUG00000005547	SF3A1	100	83.500	ENSSLDG00000012642	sf3a1	99	84.399	Seriola_lalandi_dorsalis
ENSMMUG00000005547	SF3A1	97	95.466	ENSSARG00000005960	SF3A1	100	95.466	Sorex_araneus
ENSMMUG00000005547	SF3A1	96	91.969	ENSSPUG00000018863	SF3A1	100	91.542	Sphenodon_punctatus
ENSMMUG00000005547	SF3A1	100	84.528	ENSSPAG00000011856	sf3a1	99	84.910	Stegastes_partitus
ENSMMUG00000005547	SF3A1	100	98.865	ENSSSCG00000010002	SF3A1	100	98.865	Sus_scrofa
ENSMMUG00000005547	SF3A1	95	94.063	ENSTGUG00000010547	SF3A1	99	93.515	Taeniopygia_guttata
ENSMMUG00000005547	SF3A1	100	81.509	ENSTRUG00000006118	sf3a1	97	82.353	Takifugu_rubripes
ENSMMUG00000005547	SF3A1	64	81.784	ENSTNIG00000005713	sf3a1	89	86.607	Tetraodon_nigroviridis
ENSMMUG00000005547	SF3A1	100	91.677	ENSTBEG00000012771	SF3A1	100	91.677	Tupaia_belangeri
ENSMMUG00000005547	SF3A1	100	98.615	ENSTTRG00000001535	SF3A1	100	98.615	Tursiops_truncatus
ENSMMUG00000005547	SF3A1	99	97.967	ENSUAMG00000006750	SF3A1	99	97.967	Ursus_americanus
ENSMMUG00000005547	SF3A1	99	97.959	ENSUMAG00000016665	SF3A1	99	97.959	Ursus_maritimus
ENSMMUG00000005547	SF3A1	100	98.739	ENSVVUG00000003075	SF3A1	100	98.739	Vulpes_vulpes
ENSMMUG00000005547	SF3A1	100	85.696	ENSXETG00000016144	sf3a1	100	85.445	Xenopus_tropicalis
ENSMMUG00000005547	SF3A1	100	82.893	ENSXCOG00000015653	sf3a1	99	83.142	Xiphophorus_couchianus
ENSMMUG00000005547	SF3A1	100	83.019	ENSXMAG00000002753	sf3a1	99	83.269	Xiphophorus_maculatus