EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000005659 (Gene tree)
Gene ID: 699516
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 100314 bases
Position: chr8:92908181-93008494
Accession: 699516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000007478	ResIII	PF04851.15	1.4e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000058200	-	5362	XM_015145702	ENSMMUP00000057965	117 (aa)	XP_015001188	A0A1D5RCC3
ENSMMUT00000007957	-	3072	XM_001088870	ENSMMUP00000007478	908 (aa)	XP_001088870	F6VXV3

Gene Model

Click here to download ENSMMUG00000005659's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03440	Homologous recombination	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000005659's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000005659	-	55	31.518	ENSMMUG00000009024	CHD1L	50	31.518
ENSMMUG00000005659	-	54	33.017	ENSMMUG00000022242	SMARCAD1	56	33.017
ENSMMUG00000005659	-	71	43.590	ENSMMUG00000011568	RAD54L	84	43.590
ENSMMUG00000005659	-	53	34.146	ENSMMUG00000017255	HELLS	60	39.216
ENSMMUG00000005659	-	60	31.802	ENSMMUG00000012042	SMARCA4	54	33.730

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000005659	-	80	98.209	ENSG00000265817	FSBP	100	98.209	Homo_sapiens
ENSMMUG00000005659	-	100	97.473	ENSG00000197275	RAD54B	100	97.473	Homo_sapiens
ENSMMUG00000005659	-	99	86.703	ENSAMEG00000005834	-	99	86.703	Ailuropoda_melanoleuca
ENSMMUG00000005659	-	99	54.536	ENSACIG00000013005	rad54b	99	54.536	Amphilophus_citrinellus
ENSMMUG00000005659	-	99	54.352	ENSAOCG00000008523	rad54b	99	54.352	Amphiprion_ocellaris
ENSMMUG00000005659	-	99	54.835	ENSAPEG00000001673	rad54b	99	54.945	Amphiprion_percula
ENSMMUG00000005659	-	99	54.208	ENSATEG00000001527	rad54b	99	54.208	Anabas_testudineus
ENSMMUG00000005659	-	99	69.651	ENSAPLG00000014366	-	99	69.651	Anas_platyrhynchos
ENSMMUG00000005659	-	87	70.980	ENSACAG00000003671	-	99	70.980	Anolis_carolinensis
ENSMMUG00000005659	-	71	94.290	ENSANAG00000019528	-	100	94.290	Aotus_nancymaae
ENSMMUG00000005659	-	99	54.655	ENSACLG00000007826	rad54b	99	54.655	Astatotilapia_calliptera
ENSMMUG00000005659	-	85	58.270	ENSAMXG00000039985	rad54b	94	58.008	Astyanax_mexicanus
ENSMMUG00000005659	-	99	85.132	ENSBTAG00000000632	RAD54B	99	85.132	Bos_taurus
ENSMMUG00000005659	-	79	35.475	WBGene00013792	Y116A8C.13	84	35.829	Caenorhabditis_elegans
ENSMMUG00000005659	-	100	94.286	ENSCJAG00000000080	-	100	95.862	Callithrix_jacchus
ENSMMUG00000005659	-	99	84.945	ENSCAFG00000009179	RAD54B	99	84.945	Canis_familiaris
ENSMMUG00000005659	-	99	84.835	ENSCAFG00020012084	-	99	84.835	Canis_lupus_dingo
ENSMMUG00000005659	-	99	84.802	ENSCHIG00000008230	-	99	84.802	Capra_hircus
ENSMMUG00000005659	-	99	89.329	ENSTSYG00000013234	-	99	89.329	Carlito_syrichta
ENSMMUG00000005659	-	99	84.141	ENSCPOG00000011643	-	99	84.141	Cavia_porcellus
ENSMMUG00000005659	-	100	94.286	ENSCCAG00000011754	-	100	95.724	Cebus_capucinus
ENSMMUG00000005659	-	100	99.449	ENSCATG00000030661	-	100	99.449	Cercocebus_atys
ENSMMUG00000005659	-	100	84.523	ENSCLAG00000010476	-	100	84.523	Chinchilla_lanigera
ENSMMUG00000005659	-	100	98.899	ENSCSAG00000012712	-	100	98.899	Chlorocebus_sabaeus
ENSMMUG00000005659	-	100	70.620	ENSCPBG00000003204	-	99	70.620	Chrysemys_picta_bellii
ENSMMUG00000005659	-	100	98.789	ENSCANG00000017939	-	100	99.033	Colobus_angolensis_palliatus
ENSMMUG00000005659	-	99	79.736	ENSCGRG00001020184	Rad54b	99	79.736	Cricetulus_griseus_chok1gshd
ENSMMUG00000005659	-	99	78.414	ENSCGRG00000016752	Rad54b	99	78.414	Cricetulus_griseus_crigri
ENSMMUG00000005659	-	93	61.538	ENSCSEG00000001601	rad54b	99	61.538	Cynoglossus_semilaevis
ENSMMUG00000005659	-	99	56.004	ENSCVAG00000009200	rad54b	99	56.004	Cyprinodon_variegatus
ENSMMUG00000005659	-	99	53.217	ENSDARG00000092134	rad54b	99	60.555	Danio_rerio
ENSMMUG00000005659	-	99	84.430	ENSDNOG00000015535	-	99	84.430	Dasypus_novemcinctus
ENSMMUG00000005659	-	99	84.286	ENSDORG00000002492	Rad54b	99	84.286	Dipodomys_ordii
ENSMMUG00000005659	-	87	81.749	ENSETEG00000010605	-	100	81.749	Echinops_telfairi
ENSMMUG00000005659	-	99	45.833	ENSEBUG00000009104	rad54b	99	46.452	Eptatretus_burgeri
ENSMMUG00000005659	-	97	86.183	ENSEASG00005004021	-	99	86.183	Equus_asinus_asinus
ENSMMUG00000005659	-	99	86.813	ENSECAG00000021949	-	99	86.813	Equus_caballus
ENSMMUG00000005659	-	83	81.132	ENSEEUG00000008056	-	83	81.132	Erinaceus_europaeus
ENSMMUG00000005659	-	99	53.635	ENSELUG00000009287	rad54b	99	53.846	Esox_lucius
ENSMMUG00000005659	-	99	86.469	ENSFCAG00000015513	-	99	89.779	Felis_catus
ENSMMUG00000005659	-	99	68.913	ENSFALG00000005467	-	99	68.913	Ficedula_albicollis
ENSMMUG00000005659	-	99	85.259	ENSFDAG00000020541	-	100	85.259	Fukomys_damarensis
ENSMMUG00000005659	-	86	58.291	ENSFHEG00000014382	rad54b	87	58.417	Fundulus_heteroclitus
ENSMMUG00000005659	-	86	56.156	ENSGMOG00000014774	rad54b	98	56.156	Gadus_morhua
ENSMMUG00000005659	-	100	68.472	ENSGALG00000043597	RAD54B	99	68.472	Gallus_gallus
ENSMMUG00000005659	-	99	54.376	ENSGAFG00000007901	rad54b	99	54.376	Gambusia_affinis
ENSMMUG00000005659	-	99	54.908	ENSGACG00000009128	rad54b	99	54.908	Gasterosteus_aculeatus
ENSMMUG00000005659	-	100	70.511	ENSGAGG00000018747	-	99	70.511	Gopherus_agassizii
ENSMMUG00000005659	-	99	97.250	ENSGGOG00000023516	-	99	97.250	Gorilla_gorilla
ENSMMUG00000005659	-	99	53.426	ENSHBUG00000016017	rad54b	99	53.426	Haplochromis_burtoni
ENSMMUG00000005659	-	99	83.825	ENSHGLG00000008263	RAD54B	99	83.825	Heterocephalus_glaber_female
ENSMMUG00000005659	-	99	83.062	ENSHGLG00100008108	-	99	83.062	Heterocephalus_glaber_male
ENSMMUG00000005659	-	99	53.326	ENSHCOG00000004764	rad54b	98	55.748	Hippocampus_comes
ENSMMUG00000005659	-	99	52.710	ENSIPUG00000018531	rad54b	99	52.710	Ictalurus_punctatus
ENSMMUG00000005659	-	99	84.327	ENSSTOG00000010791	-	99	84.327	Ictidomys_tridecemlineatus
ENSMMUG00000005659	-	99	81.938	ENSJJAG00000010314	Rad54b	99	81.938	Jaculus_jaculus
ENSMMUG00000005659	-	99	52.516	ENSKMAG00000004744	rad54b	99	52.516	Kryptolebias_marmoratus
ENSMMUG00000005659	-	82	70.187	ENSLACG00000000859	-	100	70.187	Latimeria_chalumnae
ENSMMUG00000005659	-	99	58.378	ENSLOCG00000010100	rad54b	97	62.515	Lepisosteus_oculatus
ENSMMUG00000005659	-	89	85.025	ENSLAFG00000015315	-	100	85.025	Loxodonta_africana
ENSMMUG00000005659	-	100	100.000	ENSMFAG00000031629	-	100	100.000	Macaca_fascicularis
ENSMMUG00000005659	-	100	99.670	ENSMNEG00000016408	-	100	99.670	Macaca_nemestrina
ENSMMUG00000005659	-	100	99.559	ENSMLEG00000006946	-	100	99.559	Mandrillus_leucophaeus
ENSMMUG00000005659	-	99	55.109	ENSMAMG00000012269	rad54b	99	54.891	Mastacembelus_armatus
ENSMMUG00000005659	-	99	53.640	ENSMZEG00005005281	rad54b	95	59.039	Maylandia_zebra
ENSMMUG00000005659	-	100	68.295	ENSMGAG00000012024	-	99	68.295	Meleagris_gallopavo
ENSMMUG00000005659	-	99	79.736	ENSMAUG00000013586	Rad54b	99	79.736	Mesocricetus_auratus
ENSMMUG00000005659	-	99	84.378	ENSMICG00000000754	-	99	84.378	Microcebus_murinus
ENSMMUG00000005659	-	99	77.473	ENSMOCG00000020035	Rad54b	99	77.692	Microtus_ochrogaster
ENSMMUG00000005659	-	99	53.688	ENSMMOG00000003394	rad54b	99	53.688	Mola_mola
ENSMMUG00000005659	-	88	76.866	ENSMODG00000007343	-	99	77.250	Monodelphis_domestica
ENSMMUG00000005659	-	71	58.942	ENSMALG00000001520	rad54b	99	58.942	Monopterus_albus
ENSMMUG00000005659	-	99	78.218	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.218	Mus_caroli
ENSMMUG00000005659	-	99	77.863	ENSMUSG00000078773	Rad54b	99	77.863	Mus_musculus
ENSMMUG00000005659	-	99	78.414	MGP_PahariEiJ_G0023933	Rad54b	99	78.414	Mus_pahari
ENSMMUG00000005659	-	99	78.768	MGP_SPRETEiJ_G0026758	Rad54b	99	78.768	Mus_spretus
ENSMMUG00000005659	-	89	87.145	ENSMPUG00000008878	-	99	87.145	Mustela_putorius_furo
ENSMMUG00000005659	-	100	84.320	ENSMLUG00000008953	-	100	84.320	Myotis_lucifugus
ENSMMUG00000005659	-	99	82.823	ENSNGAG00000017537	Rad54b	99	82.823	Nannospalax_galili
ENSMMUG00000005659	-	99	53.939	ENSNBRG00000013394	rad54b	99	53.939	Neolamprologus_brichardi
ENSMMUG00000005659	-	100	97.473	ENSNLEG00000003062	-	99	97.934	Nomascus_leucogenys
ENSMMUG00000005659	-	71	75.689	ENSMEUG00000012426	-	71	75.689	Notamacropus_eugenii
ENSMMUG00000005659	-	78	86.553	ENSODEG00000002650	-	95	86.553	Octodon_degus
ENSMMUG00000005659	-	99	83.811	ENSODEG00000019564	-	99	83.811	Octodon_degus
ENSMMUG00000005659	-	99	54.713	ENSONIG00000006067	rad54b	99	54.713	Oreochromis_niloticus
ENSMMUG00000005659	-	82	77.364	ENSOANG00000011348	-	99	77.364	Ornithorhynchus_anatinus
ENSMMUG00000005659	-	99	85.604	ENSOCUG00000016478	-	99	85.604	Oryctolagus_cuniculus
ENSMMUG00000005659	-	99	54.478	ENSORLG00000008918	rad54b	99	62.229	Oryzias_latipes
ENSMMUG00000005659	-	71	62.384	ENSORLG00020012171	rad54b	99	62.384	Oryzias_latipes_hni
ENSMMUG00000005659	-	99	54.277	ENSORLG00015018536	rad54b	99	54.277	Oryzias_latipes_hsok
ENSMMUG00000005659	-	84	59.250	ENSOMEG00000004345	rad54b	99	59.250	Oryzias_melastigma
ENSMMUG00000005659	-	99	86.703	ENSOGAG00000007854	-	99	86.703	Otolemur_garnettii
ENSMMUG00000005659	-	89	86.914	ENSOARG00000007691	-	99	86.914	Ovis_aries
ENSMMUG00000005659	-	100	95.604	ENSPPAG00000029572	-	100	95.604	Pan_paniscus
ENSMMUG00000005659	-	99	86.689	ENSPPRG00000007571	-	99	89.917	Panthera_pardus
ENSMMUG00000005659	-	80	89.917	ENSPTIG00000012670	-	99	89.917	Panthera_tigris_altaica
ENSMMUG00000005659	-	100	97.473	ENSPTRG00000020427	-	100	98.209	Pan_troglodytes
ENSMMUG00000005659	-	100	99.670	ENSPANG00000019566	-	100	99.670	Papio_anubis
ENSMMUG00000005659	-	99	58.370	ENSPKIG00000014974	rad54b	99	58.370	Paramormyrops_kingsleyae
ENSMMUG00000005659	-	100	69.423	ENSPSIG00000002383	-	99	72.917	Pelodiscus_sinensis
ENSMMUG00000005659	-	99	79.978	ENSPEMG00000012133	Rad54b	99	79.978	Peromyscus_maniculatus_bairdii
ENSMMUG00000005659	-	87	57.928	ENSPMAG00000002916	rad54b	99	58.177	Petromyzon_marinus
ENSMMUG00000005659	-	89	77.805	ENSPCIG00000020151	-	94	77.805	Phascolarctos_cinereus
ENSMMUG00000005659	-	99	55.059	ENSPFOG00000023411	rad54b	99	55.059	Poecilia_formosa
ENSMMUG00000005659	-	99	55.272	ENSPLAG00000010430	rad54b	99	55.272	Poecilia_latipinna
ENSMMUG00000005659	-	99	55.059	ENSPMEG00000016873	rad54b	95	59.236	Poecilia_mexicana
ENSMMUG00000005659	-	99	54.951	ENSPREG00000018443	rad54b	99	55.109	Poecilia_reticulata
ENSMMUG00000005659	-	100	97.253	ENSPPYG00000018750	-	100	97.253	Pongo_abelii
ENSMMUG00000005659	-	99	90.000	ENSPCOG00000026845	-	99	91.034	Propithecus_coquereli
ENSMMUG00000005659	-	87	89.474	ENSPVAG00000000261	-	92	89.474	Pteropus_vampyrus
ENSMMUG00000005659	-	86	58.756	ENSPNYG00000018303	rad54b	96	58.756	Pundamilia_nyererei
ENSMMUG00000005659	-	100	54.360	ENSPNAG00000000295	rad54b	99	54.360	Pygocentrus_nattereri
ENSMMUG00000005659	-	99	76.101	ENSRNOG00000039949	Rad54b	99	76.101	Rattus_norvegicus
ENSMMUG00000005659	-	100	98.128	ENSRBIG00000020419	-	100	98.128	Rhinopithecus_bieti
ENSMMUG00000005659	-	100	98.128	ENSRROG00000039897	-	100	98.128	Rhinopithecus_roxellana
ENSMMUG00000005659	-	81	36.609	YBR073W	RDH54	82	37.209	Saccharomyces_cerevisiae
ENSMMUG00000005659	-	100	94.176	ENSSBOG00000028501	-	100	94.176	Saimiri_boliviensis_boliviensis
ENSMMUG00000005659	-	99	74.753	ENSSHAG00000017038	-	99	74.753	Sarcophilus_harrisii
ENSMMUG00000005659	-	63	65.202	ENSSFOG00015008483	rad54b	88	65.202	Scleropages_formosus
ENSMMUG00000005659	-	99	53.010	ENSSMAG00000018659	rad54b	99	53.432	Scophthalmus_maximus
ENSMMUG00000005659	-	99	53.862	ENSSDUG00000001122	rad54b	98	53.862	Seriola_dumerili
ENSMMUG00000005659	-	99	53.838	ENSSLDG00000013787	rad54b	99	53.725	Seriola_lalandi_dorsalis
ENSMMUG00000005659	-	100	68.490	ENSSPUG00000016497	-	99	68.490	Sphenodon_punctatus
ENSMMUG00000005659	-	99	55.677	ENSSPAG00000012800	rad54b	99	55.677	Stegastes_partitus
ENSMMUG00000005659	-	100	84.928	ENSSSCG00000006101	-	99	88.110	Sus_scrofa
ENSMMUG00000005659	-	99	68.290	ENSTGUG00000011880	-	99	68.290	Taeniopygia_guttata
ENSMMUG00000005659	-	86	58.668	ENSTRUG00000010015	rad54b	99	52.935	Takifugu_rubripes
ENSMMUG00000005659	-	99	83.370	ENSTTRG00000006312	-	99	83.370	Tursiops_truncatus
ENSMMUG00000005659	-	99	86.703	ENSUMAG00000016401	-	99	86.703	Ursus_maritimus
ENSMMUG00000005659	-	99	84.344	ENSVPAG00000003157	-	99	84.344	Vicugna_pacos
ENSMMUG00000005659	-	99	54.376	ENSXETG00000025924	rad54b	99	59.375	Xenopus_tropicalis
ENSMMUG00000005659	-	99	54.705	ENSXMAG00000013141	rad54b	99	54.705	Xiphophorus_maculatus