EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000006122 (Gene tree)
Gene ID: 106994887
Gene Symbol: ZNF550
Alias: MGC41917
Full Name: zinc finger protein 550
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 25790 bases
Position: chr19:51773228-51799017
Accession: 106994887
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	1	6
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	2	6
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	3	6
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	4	6
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	5	6
ENSMMUP00000008048	zf-C2H2	PF00096.26	5.7e-37	6	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	1	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	2	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	3	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	4	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	5	6
ENSMMUP00000031401	zf-C2H2	PF00096.26	1.5e-36	6	6
ENSMMUP00000008048	zf-met	PF12874.7	0.00018	1	1
ENSMMUP00000031401	zf-met	PF12874.7	0.00042	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000008561	ZNF550-203	1131	-	ENSMMUP00000008048	376 (aa)	-	F7B034
ENSMMUT00000038306	ZNF550-201	3328	XM_015125072	ENSMMUP00000031401	417 (aa)	XP_014980558	F7HA86
ENSMMUT00000060070	ZNF550-202	378	-	ENSMMUP00000049566	125 (aa)	-	A0A1D5QNE0

Gene Model

Click here to download ENSMMUG00000006122's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000006122's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000006122	ZNF550	99	61.233	ENSMMUG00000028781	ZNF850	99	61.233
ENSMMUG00000006122	ZNF550	99	59.204	ENSMMUG00000045647	ZNF454	98	59.204
ENSMMUG00000006122	ZNF550	60	54.745	ENSMMUG00000016879	ZNF768	57	51.542
ENSMMUG00000006122	ZNF550	90	56.061	ENSMMUG00000005836	ZFP69B	98	53.043
ENSMMUG00000006122	ZNF550	99	53.333	ENSMMUG00000012085	-	99	53.333
ENSMMUG00000006122	ZNF550	98	57.078	ENSMMUG00000019423	ZNF2	95	57.078
ENSMMUG00000006122	ZNF550	98	44.690	ENSMMUG00000020859	ZNF337	99	44.298
ENSMMUG00000006122	ZNF550	99	56.637	ENSMMUG00000044256	ZNF468	99	56.637
ENSMMUG00000006122	ZNF550	99	62.115	ENSMMUG00000000362	ZNF582	93	62.115
ENSMMUG00000006122	ZNF550	99	57.269	ENSMMUG00000042984	ZNF816	96	57.269
ENSMMUG00000006122	ZNF550	99	51.190	ENSMMUG00000020841	ZNF317	90	50.833
ENSMMUG00000006122	ZNF550	99	58.503	ENSMMUG00000039849	MRPS17	95	58.503
ENSMMUG00000006122	ZNF550	99	55.429	ENSMMUG00000011587	ZFP1	98	55.429
ENSMMUG00000006122	ZNF550	99	50.802	ENSMMUG00000047218	-	96	50.649
ENSMMUG00000006122	ZNF550	100	41.162	ENSMMUG00000009487	ZNF205	73	41.162
ENSMMUG00000006122	ZNF550	99	60.500	ENSMMUG00000015835	ZNF829	99	60.500
ENSMMUG00000006122	ZNF550	99	55.652	ENSMMUG00000006472	-	97	54.425
ENSMMUG00000006122	ZNF550	99	49.778	ENSMMUG00000021472	ZNF225	97	49.778

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000006122	ZNF550	100	95.013	ENSG00000251369	ZNF550	100	95.013	Homo_sapiens
ENSMMUG00000006122	ZNF550	100	98.670	ENSCATG00000020915	ZNF550	100	98.670	Cercocebus_atys
ENSMMUG00000006122	ZNF550	100	63.446	ENSCLAG00000000250	ZNF550	95	68.267	Chinchilla_lanigera
ENSMMUG00000006122	ZNF550	98	97.549	ENSCSAG00000001629	ZNF550	100	97.549	Chlorocebus_sabaeus
ENSMMUG00000006122	ZNF550	100	97.074	ENSCANG00000033735	ZNF550	100	97.074	Colobus_angolensis_palliatus
ENSMMUG00000006122	ZNF550	89	71.554	ENSDNOG00000033330	-	99	71.429	Dasypus_novemcinctus
ENSMMUG00000006122	ZNF550	99	68.766	ENSFCAG00000034766	ZNF550	99	68.766	Felis_catus
ENSMMUG00000006122	ZNF550	100	94.488	ENSGGOG00000014068	ZNF550	100	94.488	Gorilla_gorilla
ENSMMUG00000006122	ZNF550	100	71.122	ENSHGLG00000018048	ZNF550	100	71.122	Heterocephalus_glaber_female
ENSMMUG00000006122	ZNF550	100	99.734	ENSMFAG00000036005	ZNF550	100	99.734	Macaca_fascicularis
ENSMMUG00000006122	ZNF550	100	99.734	ENSMNEG00000041366	ZNF550	100	99.734	Macaca_nemestrina
ENSMMUG00000006122	ZNF550	100	98.404	ENSMLEG00000034688	ZNF550	100	98.404	Mandrillus_leucophaeus
ENSMMUG00000006122	ZNF550	100	82.984	ENSMICG00000007561	ZNF550	100	82.984	Microcebus_murinus
ENSMMUG00000006122	ZNF550	99	68.504	ENSPPRG00000013475	ZNF550	99	68.504	Panthera_pardus
ENSMMUG00000006122	ZNF550	100	67.550	ENSPTIG00000018007	ZNF550	80	67.066	Panthera_tigris_altaica
ENSMMUG00000006122	ZNF550	100	94.488	ENSPTRG00000011560	ZNF550	100	94.488	Pan_troglodytes
ENSMMUG00000006122	ZNF550	100	98.138	ENSPANG00000030602	ZNF550	100	98.138	Papio_anubis
ENSMMUG00000006122	ZNF550	100	85.079	ENSPCOG00000018751	ZNF550	100	85.079	Propithecus_coquereli
ENSMMUG00000006122	ZNF550	99	71.635	ENSPVAG00000000908	ZNF550	100	71.635	Pteropus_vampyrus
ENSMMUG00000006122	ZNF550	100	98.138	ENSRBIG00000017275	ZNF550	100	98.138	Rhinopithecus_bieti
ENSMMUG00000006122	ZNF550	100	98.138	ENSRROG00000040063	ZNF550	100	98.138	Rhinopithecus_roxellana
ENSMMUG00000006122	ZNF550	98	78.019	ENSTTRG00000000293	ZNF550	100	78.019	Tursiops_truncatus