EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000006645 (Gene tree)
Gene ID: 712258
Gene Symbol: SRRM1
Alias: MGC39488|POP101|SRM160
Full Name: serine and arginine repetitive matrix 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 29887 bases
Position: chr1:23472201-23502087
Accession: 712258
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000054605	PWI	PF01480.17	9.1e-30	1	1
ENSMMUP00000040522	PWI	PF01480.17	9.5e-30	1	1
ENSMMUP00000008738	PWI	PF01480.17	9.8e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000062045	SRRM1-202	2451	-	ENSMMUP00000054605	816 (aa)	-	A0A1D5R2S0
ENSMMUT00000047488	SRRM1-203	2763	XM_015131392	ENSMMUP00000040522	920 (aa)	XP_014986878	F7FWH8
ENSMMUT00000009300	SRRM1-201	4015	XM_001106172	ENSMMUP00000008738	904 (aa)	XP_001106172	F7H421

Gene Model

Click here to download ENSMMUG00000006645's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03013	RNA transport	KEGG
mcc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000006645's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000006645	SRRM1	100	99.558	ENSG00000133226	SRRM1	100	100.000	Homo_sapiens
ENSMMUG00000006645	SRRM1	99	97.265	ENSAMEG00000010075	SRRM1	99	97.265	Ailuropoda_melanoleuca
ENSMMUG00000006645	SRRM1	100	98.562	ENSANAG00000035606	SRRM1	100	98.562	Aotus_nancymaae
ENSMMUG00000006645	SRRM1	99	97.549	ENSCJAG00000020822	SRRM1	100	97.808	Callithrix_jacchus
ENSMMUG00000006645	SRRM1	96	89.117	ENSCAFG00020000003	-	98	89.196	Canis_lupus_dingo
ENSMMUG00000006645	SRRM1	100	97.898	ENSCAFG00020020948	SRRM1	100	97.898	Canis_lupus_dingo
ENSMMUG00000006645	SRRM1	100	97.898	ENSTSYG00000006782	SRRM1	100	97.898	Carlito_syrichta
ENSMMUG00000006645	SRRM1	99	94.512	ENSCAPG00000011473	SRRM1	100	94.512	Cavia_aperea
ENSMMUG00000006645	SRRM1	100	98.341	ENSCCAG00000029474	SRRM1	100	98.341	Cebus_capucinus
ENSMMUG00000006645	SRRM1	100	99.877	ENSCATG00000031303	SRRM1	100	99.877	Cercocebus_atys
ENSMMUG00000006645	SRRM1	74	96.944	ENSCHOG00000000027	SRRM1	73	96.944	Choloepus_hoffmanni
ENSMMUG00000006645	SRRM1	100	99.558	ENSCANG00000028271	SRRM1	100	99.558	Colobus_angolensis_palliatus
ENSMMUG00000006645	SRRM1	96	93.182	ENSDNOG00000049141	SRRM1	98	93.182	Dasypus_novemcinctus
ENSMMUG00000006645	SRRM1	99	96.608	ENSEASG00005004270	SRRM1	99	96.608	Equus_asinus_asinus
ENSMMUG00000006645	SRRM1	100	97.013	ENSECAG00000026981	SRRM1	100	97.013	Equus_caballus
ENSMMUG00000006645	SRRM1	100	98.009	ENSFCAG00000000678	-	100	98.009	Felis_catus
ENSMMUG00000006645	SRRM1	100	99.510	ENSGGOG00000005209	SRRM1	100	99.510	Gorilla_gorilla
ENSMMUG00000006645	SRRM1	100	98.119	ENSSTOG00000014640	SRRM1	100	98.119	Ictidomys_tridecemlineatus
ENSMMUG00000006645	SRRM1	100	99.889	ENSMFAG00000025726	SRRM1	100	99.889	Macaca_fascicularis
ENSMMUG00000006645	SRRM1	86	77.617	ENSMFAG00000038841	-	61	80.684	Macaca_fascicularis
ENSMMUG00000006645	SRRM1	100	99.889	ENSMNEG00000039415	SRRM1	100	99.889	Macaca_nemestrina
ENSMMUG00000006645	SRRM1	71	99.516	ENSMLEG00000038030	-	100	94.240	Mandrillus_leucophaeus
ENSMMUG00000006645	SRRM1	59	70.709	ENSMLEG00000032221	-	61	73.384	Mandrillus_leucophaeus
ENSMMUG00000006645	SRRM1	100	98.230	ENSMICG00000006553	SRRM1	100	98.230	Microcebus_murinus
ENSMMUG00000006645	SRRM1	96	94.743	ENSMLUG00000006246	SRRM1	87	94.743	Myotis_lucifugus
ENSMMUG00000006645	SRRM1	100	99.632	ENSNLEG00000008966	SRRM1	100	99.632	Nomascus_leucogenys
ENSMMUG00000006645	SRRM1	55	89.815	ENSMEUG00000014704	SRRM1	60	88.095	Notamacropus_eugenii
ENSMMUG00000006645	SRRM1	99	96.827	ENSOGAG00000010210	SRRM1	99	96.827	Otolemur_garnettii
ENSMMUG00000006645	SRRM1	100	99.447	ENSPPAG00000043918	SRRM1	100	99.447	Pan_paniscus
ENSMMUG00000006645	SRRM1	100	98.009	ENSPPRG00000002509	SRRM1	100	98.009	Panthera_pardus
ENSMMUG00000006645	SRRM1	99	91.410	ENSPTIG00000008778	-	99	91.410	Panthera_tigris_altaica
ENSMMUG00000006645	SRRM1	100	99.558	ENSPTRG00000000349	SRRM1	100	99.558	Pan_troglodytes
ENSMMUG00000006645	SRRM1	55	79.435	ENSPANG00000035568	-	59	78.427	Papio_anubis
ENSMMUG00000006645	SRRM1	100	99.877	ENSPANG00000010194	SRRM1	100	99.877	Papio_anubis
ENSMMUG00000006645	SRRM1	99	98.470	ENSPPYG00000001716	SRRM1	99	98.470	Pongo_abelii
ENSMMUG00000006645	SRRM1	99	97.268	ENSPCOG00000021311	SRRM1	99	97.268	Propithecus_coquereli
ENSMMUG00000006645	SRRM1	99	96.937	ENSPVAG00000005836	SRRM1	99	96.937	Pteropus_vampyrus
ENSMMUG00000006645	SRRM1	100	92.970	ENSRBIG00000035461	SRRM1	99	92.913	Rhinopithecus_bieti
ENSMMUG00000006645	SRRM1	100	99.668	ENSRROG00000035151	SRRM1	100	99.668	Rhinopithecus_roxellana
ENSMMUG00000006645	SRRM1	99	97.181	ENSSBOG00000019884	SRRM1	99	100.000	Saimiri_boliviensis_boliviensis
ENSMMUG00000006645	SRRM1	61	94.754	ENSSARG00000013718	SRRM1	60	94.754	Sorex_araneus
ENSMMUG00000006645	SRRM1	59	73.693	ENSSPUG00000015890	SRRM1	57	82.841	Sphenodon_punctatus
ENSMMUG00000006645	SRRM1	99	97.380	ENSSSCG00000032947	SRRM1	100	97.725	Sus_scrofa
ENSMMUG00000006645	SRRM1	99	96.597	ENSTTRG00000009365	SRRM1	100	96.597	Tursiops_truncatus
ENSMMUG00000006645	SRRM1	88	98.622	ENSUMAG00000013121	SRRM1	95	98.622	Ursus_maritimus
ENSMMUG00000006645	SRRM1	96	93.424	ENSVPAG00000007698	SRRM1	100	93.424	Vicugna_pacos
ENSMMUG00000006645	SRRM1	96	98.342	ENSVVUG00000026966	SRRM1	97	95.307	Vulpes_vulpes