EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000006819 (Gene tree)
Gene ID: 704516
Gene Symbol: HFM1
Alias: FLJ36760|FLJ39011|MER3|SEC63D1
Full Name: probable ATP-dependent DNA helicase HFM1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 134465 bases
Position: chr1:91891206-92025670
Accession: 704516
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000039763	ResIII	PF04851.15	3.2e-11	1	1
ENSMMUP00000008961	ResIII	PF04851.15	3.2e-11	1	1
ENSMMUP00000039763	DEAD	PF00270.29	1.1e-24	1	1
ENSMMUP00000008961	DEAD	PF00270.29	1.2e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000046735	HFM1-202	4287	-	ENSMMUP00000039763	1428 (aa)	-	F7GW62
ENSMMUT00000009536	HFM1-201	4407	XM_015144699	ENSMMUP00000008961	1435 (aa)	XP_015000185	F7GZC1

Gene Model

Click here to download ENSMMUG00000006819's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000006819's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000006819	HFM1	58	32.234	ENSMMUG00000023261	SNRNP200	75	32.234
ENSMMUG00000006819	HFM1	51	35.022	ENSMMUG00000022287	ASCC3	62	35.022

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000006819	HFM1	100	96.376	ENSG00000162669	HFM1	100	96.376	Homo_sapiens
ENSMMUG00000006819	HFM1	64	64.726	ENSAPOG00000005304	hfm1	100	64.726	Acanthochromis_polyacanthus
ENSMMUG00000006819	HFM1	100	85.546	ENSAMEG00000000432	HFM1	100	85.546	Ailuropoda_melanoleuca
ENSMMUG00000006819	HFM1	70	60.117	ENSACIG00000021553	hfm1	91	60.117	Amphilophus_citrinellus
ENSMMUG00000006819	HFM1	64	65.228	ENSAOCG00000022839	hfm1	100	65.228	Amphiprion_ocellaris
ENSMMUG00000006819	HFM1	64	64.994	ENSAPEG00000014316	hfm1	96	69.027	Amphiprion_percula
ENSMMUG00000006819	HFM1	67	64.050	ENSATEG00000019181	hfm1	80	63.169	Anabas_testudineus
ENSMMUG00000006819	HFM1	100	60.000	ENSAPLG00000013639	HFM1	100	60.000	Anas_platyrhynchos
ENSMMUG00000006819	HFM1	100	90.953	ENSANAG00000029513	HFM1	100	90.953	Aotus_nancymaae
ENSMMUG00000006819	HFM1	65	63.090	ENSACLG00000009033	hfm1	97	64.601	Astatotilapia_calliptera
ENSMMUG00000006819	HFM1	85	54.575	ENSAMXG00000006108	hfm1	83	54.575	Astyanax_mexicanus
ENSMMUG00000006819	HFM1	100	84.306	ENSBTAG00000020856	HFM1	100	84.306	Bos_taurus
ENSMMUG00000006819	HFM1	100	92.683	ENSCJAG00000001843	HFM1	100	92.683	Callithrix_jacchus
ENSMMUG00000006819	HFM1	100	84.781	ENSCAFG00000020187	HFM1	100	84.781	Canis_familiaris
ENSMMUG00000006819	HFM1	100	86.657	ENSTSYG00000014250	HFM1	100	86.657	Carlito_syrichta
ENSMMUG00000006819	HFM1	99	78.149	ENSCPOG00000007421	HFM1	99	78.149	Cavia_porcellus
ENSMMUG00000006819	HFM1	100	92.683	ENSCCAG00000033206	HFM1	100	92.683	Cebus_capucinus
ENSMMUG00000006819	HFM1	100	98.815	ENSCATG00000030987	HFM1	100	98.815	Cercocebus_atys
ENSMMUG00000006819	HFM1	100	80.499	ENSCLAG00000005173	HFM1	99	80.499	Chinchilla_lanigera
ENSMMUG00000006819	HFM1	68	96.053	ENSCHOG00000011824	-	77	96.053	Choloepus_hoffmanni
ENSMMUG00000006819	HFM1	100	73.393	ENSCGRG00001016995	Hfm1	100	73.393	Cricetulus_griseus_chok1gshd
ENSMMUG00000006819	HFM1	100	77.623	ENSCGRG00000017181	Hfm1	100	77.623	Cricetulus_griseus_crigri
ENSMMUG00000006819	HFM1	70	59.730	ENSCSEG00000017659	hfm1	93	59.691	Cynoglossus_semilaevis
ENSMMUG00000006819	HFM1	50	69.144	ENSCVAG00000005075	hfm1	86	69.144	Cyprinodon_variegatus
ENSMMUG00000006819	HFM1	79	54.196	ENSDARG00000104288	hfm1	99	54.196	Danio_rerio
ENSMMUG00000006819	HFM1	100	80.593	ENSDNOG00000004776	HFM1	100	80.593	Dasypus_novemcinctus
ENSMMUG00000006819	HFM1	100	77.541	ENSDORG00000014661	Hfm1	100	77.541	Dipodomys_ordii
ENSMMUG00000006819	HFM1	70	85.094	ENSEASG00005015424	HFM1	98	84.199	Equus_asinus_asinus
ENSMMUG00000006819	HFM1	100	83.771	ENSECAG00000024039	HFM1	100	83.771	Equus_caballus
ENSMMUG00000006819	HFM1	64	66.396	ENSELUG00000018944	hfm1	99	66.396	Esox_lucius
ENSMMUG00000006819	HFM1	100	85.069	ENSFCAG00000029116	HFM1	100	85.069	Felis_catus
ENSMMUG00000006819	HFM1	100	59.945	ENSFALG00000001781	HFM1	100	60.359	Ficedula_albicollis
ENSMMUG00000006819	HFM1	100	78.711	ENSFDAG00000020816	HFM1	100	78.711	Fukomys_damarensis
ENSMMUG00000006819	HFM1	66	60.042	ENSGMOG00000017436	hfm1	100	60.042	Gadus_morhua
ENSMMUG00000006819	HFM1	71	61.516	ENSGAFG00000018093	hfm1	95	65.570	Gambusia_affinis
ENSMMUG00000006819	HFM1	66	61.920	ENSGACG00000015686	hfm1	100	61.920	Gasterosteus_aculeatus
ENSMMUG00000006819	HFM1	100	96.028	ENSGGOG00000038524	HFM1	100	96.028	Gorilla_gorilla
ENSMMUG00000006819	HFM1	65	64.163	ENSHBUG00000007309	hfm1	96	59.390	Haplochromis_burtoni
ENSMMUG00000006819	HFM1	57	63.848	ENSHCOG00000019632	hfm1	97	63.848	Hippocampus_comes
ENSMMUG00000006819	HFM1	66	63.979	ENSIPUG00000017020	hfm1	92	65.357	Ictalurus_punctatus
ENSMMUG00000006819	HFM1	100	77.662	ENSJJAG00000017198	Hfm1	100	77.662	Jaculus_jaculus
ENSMMUG00000006819	HFM1	62	63.525	ENSKMAG00000002282	hfm1	90	63.596	Kryptolebias_marmoratus
ENSMMUG00000006819	HFM1	70	60.609	ENSLBEG00000006759	hfm1	98	64.830	Labrus_bergylta
ENSMMUG00000006819	HFM1	66	69.835	ENSLACG00000010698	HFM1	99	65.877	Latimeria_chalumnae
ENSMMUG00000006819	HFM1	75	62.269	ENSLOCG00000004931	hfm1	99	62.362	Lepisosteus_oculatus
ENSMMUG00000006819	HFM1	52	90.040	ENSLAFG00000015903	-	99	90.040	Loxodonta_africana
ENSMMUG00000006819	HFM1	100	96.947	ENSMFAG00000003649	HFM1	100	96.947	Macaca_fascicularis
ENSMMUG00000006819	HFM1	54	70.475	ENSMAMG00000004623	hfm1	97	71.357	Mastacembelus_armatus
ENSMMUG00000006819	HFM1	65	63.090	ENSMZEG00005004679	hfm1	97	64.601	Maylandia_zebra
ENSMMUG00000006819	HFM1	54	77.296	ENSMGAG00000008437	HFM1	98	77.296	Meleagris_gallopavo
ENSMMUG00000006819	HFM1	100	77.431	ENSMAUG00000018858	Hfm1	100	77.431	Mesocricetus_auratus
ENSMMUG00000006819	HFM1	100	87.422	ENSMICG00000037935	HFM1	100	87.422	Microcebus_murinus
ENSMMUG00000006819	HFM1	100	75.313	ENSMOCG00000014812	Hfm1	100	75.313	Microtus_ochrogaster
ENSMMUG00000006819	HFM1	62	63.677	ENSMMOG00000006148	hfm1	96	63.847	Mola_mola
ENSMMUG00000006819	HFM1	65	63.966	ENSMALG00000002401	hfm1	100	66.546	Monopterus_albus
ENSMMUG00000006819	HFM1	94	71.570	MGP_CAROLIEiJ_G0027496	Hfm1	100	71.570	Mus_caroli
ENSMMUG00000006819	HFM1	100	76.634	ENSMUSG00000043410	Hfm1	100	76.634	Mus_musculus
ENSMMUG00000006819	HFM1	100	76.565	MGP_PahariEiJ_G0017268	Hfm1	100	76.565	Mus_pahari
ENSMMUG00000006819	HFM1	100	76.287	MGP_SPRETEiJ_G0028495	Hfm1	100	76.287	Mus_spretus
ENSMMUG00000006819	HFM1	100	81.414	ENSMPUG00000004594	HFM1	100	81.414	Mustela_putorius_furo
ENSMMUG00000006819	HFM1	100	82.929	ENSMLUG00000010200	HFM1	100	82.929	Myotis_lucifugus
ENSMMUG00000006819	HFM1	65	59.914	ENSNBRG00000002910	hfm1	97	64.970	Neolamprologus_brichardi
ENSMMUG00000006819	HFM1	100	91.649	ENSNLEG00000010285	HFM1	100	91.649	Nomascus_leucogenys
ENSMMUG00000006819	HFM1	84	65.805	ENSMEUG00000015788	HFM1	84	65.805	Notamacropus_eugenii
ENSMMUG00000006819	HFM1	84	78.054	ENSOPRG00000013916	HFM1	84	78.054	Ochotona_princeps
ENSMMUG00000006819	HFM1	71	61.762	ENSONIG00000010590	hfm1	99	61.627	Oreochromis_niloticus
ENSMMUG00000006819	HFM1	57	65.929	ENSORLG00000026844	hfm1	99	65.929	Oryzias_latipes
ENSMMUG00000006819	HFM1	85	49.275	ENSORLG00020002951	hfm1	96	49.356	Oryzias_latipes_hni
ENSMMUG00000006819	HFM1	85	54.618	ENSOMEG00000016474	hfm1	83	54.618	Oryzias_melastigma
ENSMMUG00000006819	HFM1	85	88.111	ENSOGAG00000032369	HFM1	100	88.111	Otolemur_garnettii
ENSMMUG00000006819	HFM1	100	84.525	ENSOARG00000015812	HFM1	100	84.525	Ovis_aries
ENSMMUG00000006819	HFM1	92	96.752	ENSPPAG00000024582	HFM1	100	96.752	Pan_paniscus
ENSMMUG00000006819	HFM1	100	85.000	ENSPPRG00000003270	HFM1	100	85.000	Panthera_pardus
ENSMMUG00000006819	HFM1	100	84.931	ENSPTIG00000018881	HFM1	100	84.931	Panthera_tigris_altaica
ENSMMUG00000006819	HFM1	100	96.167	ENSPTRG00000000948	HFM1	100	96.167	Pan_troglodytes
ENSMMUG00000006819	HFM1	100	98.467	ENSPANG00000009838	HFM1	100	98.467	Papio_anubis
ENSMMUG00000006819	HFM1	62	67.114	ENSPKIG00000003810	hfm1	95	67.754	Paramormyrops_kingsleyae
ENSMMUG00000006819	HFM1	58	65.901	ENSPMGG00000011059	hfm1	100	65.901	Periophthalmus_magnuspinnatus
ENSMMUG00000006819	HFM1	100	79.416	ENSPEMG00000022852	Hfm1	100	79.416	Peromyscus_maniculatus_bairdii
ENSMMUG00000006819	HFM1	100	67.247	ENSPCIG00000014233	HFM1	100	67.247	Phascolarctos_cinereus
ENSMMUG00000006819	HFM1	70	61.846	ENSPFOG00000017194	hfm1	99	61.846	Poecilia_formosa
ENSMMUG00000006819	HFM1	71	63.938	ENSPLAG00000000571	hfm1	92	63.938	Poecilia_latipinna
ENSMMUG00000006819	HFM1	71	63.919	ENSPMEG00000019475	hfm1	92	63.919	Poecilia_mexicana
ENSMMUG00000006819	HFM1	70	63.116	ENSPREG00000007803	hfm1	93	66.385	Poecilia_reticulata
ENSMMUG00000006819	HFM1	100	95.889	ENSPPYG00000001163	HFM1	100	95.889	Pongo_abelii
ENSMMUG00000006819	HFM1	74	83.051	ENSPCAG00000004289	-	74	83.051	Procavia_capensis
ENSMMUG00000006819	HFM1	100	77.383	ENSPVAG00000009713	HFM1	100	77.383	Pteropus_vampyrus
ENSMMUG00000006819	HFM1	65	62.876	ENSPNYG00000001795	hfm1	97	64.482	Pundamilia_nyererei
ENSMMUG00000006819	HFM1	59	67.141	ENSPNAG00000010865	hfm1	83	67.141	Pygocentrus_nattereri
ENSMMUG00000006819	HFM1	100	75.661	ENSRNOG00000023299	Hfm1	100	75.661	Rattus_norvegicus
ENSMMUG00000006819	HFM1	100	97.352	ENSRROG00000045569	HFM1	100	97.352	Rhinopithecus_roxellana
ENSMMUG00000006819	HFM1	100	90.314	ENSSBOG00000027456	HFM1	100	90.314	Saimiri_boliviensis_boliviensis
ENSMMUG00000006819	HFM1	60	71.445	ENSSHAG00000014616	-	98	71.445	Sarcophilus_harrisii
ENSMMUG00000006819	HFM1	86	56.701	ENSSFOG00015020129	hfm1	83	56.701	Scleropages_formosus
ENSMMUG00000006819	HFM1	62	64.693	ENSSMAG00000006907	hfm1	87	64.693	Scophthalmus_maximus
ENSMMUG00000006819	HFM1	62	65.659	ENSSDUG00000011424	hfm1	100	65.659	Seriola_dumerili
ENSMMUG00000006819	HFM1	62	65.783	ENSSLDG00000016386	hfm1	99	65.783	Seriola_lalandi_dorsalis
ENSMMUG00000006819	HFM1	62	66.307	ENSSPAG00000001023	hfm1	100	66.307	Stegastes_partitus
ENSMMUG00000006819	HFM1	100	81.010	ENSSSCG00000006912	HFM1	100	81.010	Sus_scrofa
ENSMMUG00000006819	HFM1	66	75.235	ENSTGUG00000006172	HFM1	100	75.235	Taeniopygia_guttata
ENSMMUG00000006819	HFM1	100	81.042	ENSTTRG00000013933	HFM1	100	81.042	Tursiops_truncatus
ENSMMUG00000006819	HFM1	93	83.216	ENSVPAG00000011331	HFM1	93	83.216	Vicugna_pacos
ENSMMUG00000006819	HFM1	71	82.478	ENSVVUG00000020760	HFM1	99	82.478	Vulpes_vulpes
ENSMMUG00000006819	HFM1	59	66.468	ENSXMAG00000004178	hfm1	93	66.468	Xiphophorus_maculatus