EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000006828 (Gene tree)
Gene ID: 715537
Gene Symbol: VARS
Alias: VARS2
Full Name: valyl-tRNA synthetase
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 19100 bases
Position: chr4:32645582-32664681
Accession: 715537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000008979	tRNA-synt_1g	PF09334.11	2.7e-10	1	1
ENSMMUP00000008979	Anticodon_1	PF08264.13	1.7e-32	1	1
ENSMMUP00000008979	tRNA-synt_1	PF00133.22	1.1e-200	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000009554	VARS-201	4384	XM_015136000	ENSMMUP00000008979	1264 (aa)	XP_014991486	G7MRK4

Gene Model

Click here to download ENSMMUG00000006828's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc00970	Aminoacyl-tRNA biosynthesis	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000006828's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000006828	VARS	81	50.870	ENSMMUG00000018609	VARS2	91	51.911

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000006828	VARS	100	98.972	ENSG00000204394	VARS	100	98.972	Homo_sapiens
ENSMMUG00000006828	VARS	98	64.796	ENSAPOG00000020691	vars	99	64.475	Acanthochromis_polyacanthus
ENSMMUG00000006828	VARS	98	64.796	ENSAPOG00000020921	vars	99	64.475	Acanthochromis_polyacanthus
ENSMMUG00000006828	VARS	100	95.099	ENSAMEG00000006417	VARS	100	95.099	Ailuropoda_melanoleuca
ENSMMUG00000006828	VARS	100	65.725	ENSACIG00000013752	vars	100	65.412	Amphilophus_citrinellus
ENSMMUG00000006828	VARS	100	64.624	ENSAOCG00000002447	vars	100	64.280	Amphiprion_ocellaris
ENSMMUG00000006828	VARS	100	64.624	ENSAPEG00000010638	vars	99	64.798	Amphiprion_percula
ENSMMUG00000006828	VARS	100	64.803	ENSATEG00000020219	vars	100	64.409	Anabas_testudineus
ENSMMUG00000006828	VARS	90	70.598	ENSACAG00000029133	-	99	71.032	Anolis_carolinensis
ENSMMUG00000006828	VARS	100	97.468	ENSANAG00000015453	VARS	100	97.468	Aotus_nancymaae
ENSMMUG00000006828	VARS	100	64.961	ENSACLG00000025699	vars	97	64.651	Astatotilapia_calliptera
ENSMMUG00000006828	VARS	94	66.138	ENSAMXG00000017716	vars	95	66.138	Astyanax_mexicanus
ENSMMUG00000006828	VARS	100	94.858	ENSBTAG00000005631	VARS	100	94.858	Bos_taurus
ENSMMUG00000006828	VARS	100	97.468	ENSCJAG00000002604	VARS	100	97.468	Callithrix_jacchus
ENSMMUG00000006828	VARS	100	94.541	ENSCAFG00000000636	VARS	100	94.541	Canis_familiaris
ENSMMUG00000006828	VARS	94	94.510	ENSCAFG00020020790	VARS	96	94.510	Canis_lupus_dingo
ENSMMUG00000006828	VARS	100	95.095	ENSCHIG00000011008	VARS	100	95.095	Capra_hircus
ENSMMUG00000006828	VARS	100	95.965	ENSTSYG00000001567	VARS	100	95.965	Carlito_syrichta
ENSMMUG00000006828	VARS	91	90.571	ENSCAPG00000013736	VARS	99	90.571	Cavia_aperea
ENSMMUG00000006828	VARS	100	91.693	ENSCPOG00000000870	VARS	100	91.693	Cavia_porcellus
ENSMMUG00000006828	VARS	100	97.627	ENSCCAG00000035656	VARS	100	97.627	Cebus_capucinus
ENSMMUG00000006828	VARS	100	99.446	ENSCATG00000022394	VARS	100	99.446	Cercocebus_atys
ENSMMUG00000006828	VARS	88	89.764	ENSCLAG00000009470	VARS	92	89.764	Chinchilla_lanigera
ENSMMUG00000006828	VARS	100	99.763	ENSCSAG00000008784	VARS	100	99.763	Chlorocebus_sabaeus
ENSMMUG00000006828	VARS	77	74.435	ENSCPBG00000007943	VARS	96	74.538	Chrysemys_picta_bellii
ENSMMUG00000006828	VARS	100	99.446	ENSCANG00000033570	VARS	100	99.446	Colobus_angolensis_palliatus
ENSMMUG00000006828	VARS	100	93.196	ENSCGRG00001005686	Vars	100	93.196	Cricetulus_griseus_chok1gshd
ENSMMUG00000006828	VARS	92	88.107	ENSCGRG00000013352	Vars	78	88.107	Cricetulus_griseus_crigri
ENSMMUG00000006828	VARS	100	64.506	ENSCSEG00000019652	vars	100	64.585	Cynoglossus_semilaevis
ENSMMUG00000006828	VARS	100	65.190	ENSCVAG00000022398	vars	100	65.039	Cyprinodon_variegatus
ENSMMUG00000006828	VARS	100	64.934	ENSDARG00000044575	vars	100	65.086	Danio_rerio
ENSMMUG00000006828	VARS	84	93.227	ENSDORG00000016433	Vars	95	93.227	Dipodomys_ordii
ENSMMUG00000006828	VARS	69	86.799	ENSETEG00000003824	VARS	76	86.799	Echinops_telfairi
ENSMMUG00000006828	VARS	50	70.833	ENSEBUG00000007086	vars	84	69.983	Eptatretus_burgeri
ENSMMUG00000006828	VARS	57	62.088	ENSEBUG00000004637	vars	100	62.363	Eptatretus_burgeri
ENSMMUG00000006828	VARS	100	95.728	ENSEASG00005015673	VARS	100	95.728	Equus_asinus_asinus
ENSMMUG00000006828	VARS	100	94.704	ENSECAG00000014620	VARS	100	95.178	Equus_caballus
ENSMMUG00000006828	VARS	83	92.734	ENSEEUG00000004116	VARS	83	92.734	Erinaceus_europaeus
ENSMMUG00000006828	VARS	100	64.302	ENSELUG00000006550	vars	97	64.105	Esox_lucius
ENSMMUG00000006828	VARS	100	94.778	ENSFCAG00000004510	VARS	100	94.778	Felis_catus
ENSMMUG00000006828	VARS	82	91.959	ENSFDAG00000011401	VARS	100	91.959	Fukomys_damarensis
ENSMMUG00000006828	VARS	100	65.268	ENSFHEG00000010672	vars	100	65.116	Fundulus_heteroclitus
ENSMMUG00000006828	VARS	92	66.057	ENSGMOG00000014908	vars	97	66.140	Gadus_morhua
ENSMMUG00000006828	VARS	100	65.525	ENSGAFG00000021630	vars	100	65.501	Gambusia_affinis
ENSMMUG00000006828	VARS	92	66.332	ENSGACG00000009601	vars	98	66.167	Gasterosteus_aculeatus
ENSMMUG00000006828	VARS	50	64.826	ENSGAGG00000006508	-	91	64.196	Gopherus_agassizii
ENSMMUG00000006828	VARS	100	99.051	ENSGGOG00000011364	VARS	100	99.051	Gorilla_gorilla
ENSMMUG00000006828	VARS	100	64.884	ENSHBUG00000017151	vars	97	64.574	Haplochromis_burtoni
ENSMMUG00000006828	VARS	100	90.744	ENSHGLG00000011646	VARS	100	90.427	Heterocephalus_glaber_female
ENSMMUG00000006828	VARS	93	83.140	ENSHGLG00100018062	VARS	100	83.056	Heterocephalus_glaber_male
ENSMMUG00000006828	VARS	99	64.419	ENSHCOG00000012198	vars	99	64.669	Hippocampus_comes
ENSMMUG00000006828	VARS	100	65.370	ENSIPUG00000005218	vars	100	65.370	Ictalurus_punctatus
ENSMMUG00000006828	VARS	100	94.625	ENSSTOG00000013112	VARS	100	94.625	Ictidomys_tridecemlineatus
ENSMMUG00000006828	VARS	100	91.456	ENSJJAG00000019749	-	100	91.456	Jaculus_jaculus
ENSMMUG00000006828	VARS	100	72.152	ENSJJAG00000015343	-	100	72.627	Jaculus_jaculus
ENSMMUG00000006828	VARS	100	65.087	ENSKMAG00000009455	vars	100	64.929	Kryptolebias_marmoratus
ENSMMUG00000006828	VARS	100	63.715	ENSLBEG00000010341	vars	100	64.432	Labrus_bergylta
ENSMMUG00000006828	VARS	94	62.366	ENSLACG00000015232	VARS	99	62.787	Latimeria_chalumnae
ENSMMUG00000006828	VARS	100	66.875	ENSLOCG00000004240	vars	100	67.109	Lepisosteus_oculatus
ENSMMUG00000006828	VARS	100	93.592	ENSLAFG00000023090	VARS	100	94.066	Loxodonta_africana
ENSMMUG00000006828	VARS	100	100.000	ENSMFAG00000001032	VARS	100	100.000	Macaca_fascicularis
ENSMMUG00000006828	VARS	100	99.842	ENSMNEG00000042072	VARS	100	99.842	Macaca_nemestrina
ENSMMUG00000006828	VARS	100	99.604	ENSMLEG00000039307	VARS	100	99.604	Mandrillus_leucophaeus
ENSMMUG00000006828	VARS	100	64.569	ENSMAMG00000003949	vars	100	64.899	Mastacembelus_armatus
ENSMMUG00000006828	VARS	100	64.961	ENSMZEG00005018327	vars	100	64.483	Maylandia_zebra
ENSMMUG00000006828	VARS	100	92.722	ENSMAUG00000006715	Vars	100	92.722	Mesocricetus_auratus
ENSMMUG00000006828	VARS	100	94.937	ENSMICG00000003548	VARS	100	95.522	Microcebus_murinus
ENSMMUG00000006828	VARS	100	90.111	ENSMOCG00000015404	Vars	100	90.585	Microtus_ochrogaster
ENSMMUG00000006828	VARS	100	64.286	ENSMMOG00000015801	vars	100	64.286	Mola_mola
ENSMMUG00000006828	VARS	100	86.709	ENSMODG00000015204	-	100	86.709	Monodelphis_domestica
ENSMMUG00000006828	VARS	99	64.854	ENSMALG00000022532	vars	99	64.623	Monopterus_albus
ENSMMUG00000006828	VARS	100	93.354	MGP_CAROLIEiJ_G0021491	Vars	100	93.750	Mus_caroli
ENSMMUG00000006828	VARS	100	93.354	ENSMUSG00000007029	Vars	100	93.750	Mus_musculus
ENSMMUG00000006828	VARS	100	92.722	MGP_PahariEiJ_G0020486	Vars	100	93.117	Mus_pahari
ENSMMUG00000006828	VARS	100	93.434	MGP_SPRETEiJ_G0022396	Vars	100	93.829	Mus_spretus
ENSMMUG00000006828	VARS	100	95.016	ENSMPUG00000010821	VARS	100	95.016	Mustela_putorius_furo
ENSMMUG00000006828	VARS	78	93.725	ENSMLUG00000013126	VARS	100	93.725	Myotis_lucifugus
ENSMMUG00000006828	VARS	100	92.326	ENSNGAG00000012151	Vars	100	92.326	Nannospalax_galili
ENSMMUG00000006828	VARS	100	64.651	ENSNBRG00000020520	vars	100	64.341	Neolamprologus_brichardi
ENSMMUG00000006828	VARS	100	98.180	ENSNLEG00000006351	VARS	100	98.180	Nomascus_leucogenys
ENSMMUG00000006828	VARS	100	83.149	ENSMEUG00000011378	VARS	100	83.149	Notamacropus_eugenii
ENSMMUG00000006828	VARS	100	94.066	ENSOPRG00000003607	VARS	100	94.066	Ochotona_princeps
ENSMMUG00000006828	VARS	100	91.456	ENSODEG00000017681	VARS	100	91.456	Octodon_degus
ENSMMUG00000006828	VARS	100	65.520	ENSONIG00000013064	vars	99	67.823	Oreochromis_niloticus
ENSMMUG00000006828	VARS	77	78.741	ENSOANG00000005400	VARS	98	78.266	Ornithorhynchus_anatinus
ENSMMUG00000006828	VARS	100	92.247	ENSOCUG00000022463	VARS	100	92.035	Oryctolagus_cuniculus
ENSMMUG00000006828	VARS	100	64.373	ENSORLG00000013063	vars	100	64.521	Oryzias_latipes
ENSMMUG00000006828	VARS	100	65.073	ENSORLG00020003504	vars	100	65.050	Oryzias_latipes_hni
ENSMMUG00000006828	VARS	100	64.969	ENSORLG00015009001	vars	100	64.946	Oryzias_latipes_hsok
ENSMMUG00000006828	VARS	100	64.815	ENSOMEG00000015016	vars	100	64.792	Oryzias_melastigma
ENSMMUG00000006828	VARS	100	95.253	ENSOGAG00000007515	VARS	100	95.253	Otolemur_garnettii
ENSMMUG00000006828	VARS	100	99.209	ENSPPAG00000034012	VARS	100	99.209	Pan_paniscus
ENSMMUG00000006828	VARS	100	94.937	ENSPPRG00000014855	VARS	100	94.937	Panthera_pardus
ENSMMUG00000006828	VARS	85	94.981	ENSPTIG00000010462	VARS	95	94.963	Panthera_tigris_altaica
ENSMMUG00000006828	VARS	100	99.130	ENSPTRG00000017985	VARS	100	99.130	Pan_troglodytes
ENSMMUG00000006828	VARS	100	98.028	ENSPANG00000014565	VARS	100	98.028	Papio_anubis
ENSMMUG00000006828	VARS	100	63.938	ENSPKIG00000016304	vars	100	64.093	Paramormyrops_kingsleyae
ENSMMUG00000006828	VARS	100	65.485	ENSPMGG00000023909	vars	100	65.563	Periophthalmus_magnuspinnatus
ENSMMUG00000006828	VARS	100	93.908	ENSPEMG00000006639	Vars	100	93.908	Peromyscus_maniculatus_bairdii
ENSMMUG00000006828	VARS	100	86.155	ENSPCIG00000018553	VARS	100	86.155	Phascolarctos_cinereus
ENSMMUG00000006828	VARS	100	65.681	ENSPFOG00000015690	vars	100	65.657	Poecilia_formosa
ENSMMUG00000006828	VARS	100	66.168	ENSPLAG00000009590	vars	100	66.168	Poecilia_latipinna
ENSMMUG00000006828	VARS	100	65.681	ENSPMEG00000004708	vars	100	65.657	Poecilia_mexicana
ENSMMUG00000006828	VARS	100	64.123	ENSPREG00000013264	vars	100	63.558	Poecilia_reticulata
ENSMMUG00000006828	VARS	100	97.310	ENSPPYG00000016460	VARS	100	97.310	Pongo_abelii
ENSMMUG00000006828	VARS	86	92.460	ENSPCAG00000013565	VARS	86	92.460	Procavia_capensis
ENSMMUG00000006828	VARS	100	95.178	ENSPCOG00000010942	VARS	100	95.652	Propithecus_coquereli
ENSMMUG00000006828	VARS	100	91.456	ENSPVAG00000012403	VARS	100	91.456	Pteropus_vampyrus
ENSMMUG00000006828	VARS	100	64.884	ENSPNYG00000022511	vars	100	64.574	Pundamilia_nyererei
ENSMMUG00000006828	VARS	100	64.779	ENSPNAG00000020962	vars	100	64.546	Pygocentrus_nattereri
ENSMMUG00000006828	VARS	100	93.513	ENSRNOG00000000867	Vars	100	93.513	Rattus_norvegicus
ENSMMUG00000006828	VARS	100	99.684	ENSRBIG00000041669	VARS	100	99.684	Rhinopithecus_bieti
ENSMMUG00000006828	VARS	100	99.684	ENSRROG00000045490	VARS	100	99.684	Rhinopithecus_roxellana
ENSMMUG00000006828	VARS	100	97.231	ENSSBOG00000035402	VARS	100	97.231	Saimiri_boliviensis_boliviensis
ENSMMUG00000006828	VARS	100	81.697	ENSSHAG00000006937	VARS	100	81.932	Sarcophilus_harrisii
ENSMMUG00000006828	VARS	100	64.710	ENSSFOG00015014272	vars	100	64.788	Scleropages_formosus
ENSMMUG00000006828	VARS	100	63.700	ENSSMAG00000009596	vars	99	63.439	Scophthalmus_maximus
ENSMMUG00000006828	VARS	100	64.551	ENSSDUG00000014177	vars	100	64.319	Seriola_dumerili
ENSMMUG00000006828	VARS	100	64.474	ENSSLDG00000025316	vars	100	64.164	Seriola_lalandi_dorsalis
ENSMMUG00000006828	VARS	100	65.008	ENSSPAG00000017068	vars	100	65.109	Stegastes_partitus
ENSMMUG00000006828	VARS	100	93.123	ENSSSCG00000038950	VARS	100	93.597	Sus_scrofa
ENSMMUG00000006828	VARS	82	64.334	ENSTRUG00000012307	vars	98	64.279	Takifugu_rubripes
ENSMMUG00000006828	VARS	100	65.442	ENSTNIG00000008011	vars	100	65.439	Tetraodon_nigroviridis
ENSMMUG00000006828	VARS	54	95.880	ENSTBEG00000004728	-	60	95.880	Tupaia_belangeri
ENSMMUG00000006828	VARS	100	86.155	ENSTTRG00000014128	VARS	100	86.155	Tursiops_truncatus
ENSMMUG00000006828	VARS	100	91.274	ENSUAMG00000010424	VARS	100	91.274	Ursus_americanus
ENSMMUG00000006828	VARS	93	94.603	ENSUMAG00000013486	VARS	98	94.762	Ursus_maritimus
ENSMMUG00000006828	VARS	100	94.150	ENSVVUG00000021323	VARS	100	94.229	Vulpes_vulpes
ENSMMUG00000006828	VARS	96	63.137	ENSXETG00000024076	vars	98	62.945	Xenopus_tropicalis
ENSMMUG00000006828	VARS	100	65.591	ENSXCOG00000019172	vars	100	65.723	Xiphophorus_couchianus
ENSMMUG00000006828	VARS	100	65.447	ENSXMAG00000010927	vars	100	65.423	Xiphophorus_maculatus