EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMUG00000007497 (Gene tree)
Gene ID
716083
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Macaca_mulatta
Status
putative
Strand
Minus strand
Length
17816 bases
Position
chr1:38831190-38849005
Accession
716083
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMUP00000009844PABPPF00658.182.8e-3111
ENSMMUP00000009844RRM_5PF13893.61.1e-0811
ENSMMUP00000009844RRM_1PF00076.221.4e-9114
ENSMMUP00000009844RRM_1PF00076.221.4e-9124
ENSMMUP00000009844RRM_1PF00076.221.4e-9134
ENSMMUP00000009844RRM_1PF00076.221.4e-9144
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMUT00000010491PABPC4-2015060XM_015135871ENSMMUP00000009844660 (aa)XP_014991357F6QKE0
Gene Model
Click here to download ENSMMUG00000007497's gene model file
Pathways
Pathway IDPathway NameSource
mcc03013RNA transportKEGG
mcc03015mRNA surveillance pathwayKEGG
mcc03018RNA degradationKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000007497's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMUG00000007497PABPC45676.650ENSMMUG00000039929-9976.650
ENSMMUG00000007497PABPC45630.952ENSMMUG00000021933ELAVL49030.921
ENSMMUG00000007497PABPC46780.090ENSMMUG00000020835PABPC39380.090
ENSMMUG00000007497PABPC45530.189ENSMMUG00000001126TIA18530.189
ENSMMUG00000007497PABPC45767.135ENSMMUG00000011562PABPC59666.942
ENSMMUG00000007497PABPC45676.650ENSMMUG00000009740-9976.650
ENSMMUG00000007497PABPC45734.722ENSMMUG00000020616ELAVL39233.735
ENSMMUG00000007497PABPC45038.889ENSMMUG00000011657CELF17038.636
ENSMMUG00000007497PABPC45676.650ENSMMUG00000037681-9976.650
ENSMMUG00000007497PABPC45631.579ENSMMUG00000010038ELAVL28834.940
ENSMMUG00000007497PABPC49975.224ENSMMUG00000017786PABPC19990.000
ENSMMUG00000007497PABPC49973.191ENSMMUG00000047411-9590.099
ENSMMUG00000007497PABPC49353.301ENSMMUG00000041053-9453.301
ENSMMUG00000007497PABPC45531.250ENSMMUG00000001472TIAL17830.682
ENSMMUG00000007497PABPC45537.500ENSMMUG00000037449CELF25937.500
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMUG00000007497PABPC410099.848ENSG00000090621PABPC4100100.000Homo_sapiens
ENSMMUG00000007497PABPC49979.697ENSAPOG00000001161pabpc410080.269Acanthochromis_polyacanthus
ENSMMUG00000007497PABPC49855.146ENSAMEG00000015083-9954.839Ailuropoda_melanoleuca
ENSMMUG00000007497PABPC410099.091ENSAMEG00000011535-10099.091Ailuropoda_melanoleuca
ENSMMUG00000007497PABPC410080.419ENSACIG00000023343pabpc410081.016Amphilophus_citrinellus
ENSMMUG00000007497PABPC49979.848ENSAOCG00000021529pabpc410090.807Amphiprion_ocellaris
ENSMMUG00000007497PABPC49979.848ENSAPEG00000019196pabpc410080.120Amphiprion_percula
ENSMMUG00000007497PABPC49978.550ENSATEG00000007402pabpc410079.254Anabas_testudineus
ENSMMUG00000007497PABPC49987.405ENSAPLG00000009729-10087.405Anas_platyrhynchos
ENSMMUG00000007497PABPC49985.714ENSACAG00000002544PABPC410085.714Anolis_carolinensis
ENSMMUG00000007497PABPC410099.697ENSANAG00000025079PABPC410099.697Aotus_nancymaae
ENSMMUG00000007497PABPC410079.522ENSACLG00000019558pabpc410080.120Astatotilapia_calliptera
ENSMMUG00000007497PABPC49975.758ENSAMXG00000018779pabpc49976.364Astyanax_mexicanus
ENSMMUG00000007497PABPC45586.826ENSBTAG00000048536-9886.826Bos_taurus
ENSMMUG00000007497PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSMMUG00000007497PABPC410099.545ENSCJAG00000002512-10099.545Callithrix_jacchus
ENSMMUG00000007497PABPC47883.883ENSCJAG00000045953-9283.824Callithrix_jacchus
ENSMMUG00000007497PABPC49999.161ENSCAFG00000003081PABPC410095.000Canis_familiaris
ENSMMUG00000007497PABPC410099.242ENSCAFG00020004161PABPC410099.242Canis_lupus_dingo
ENSMMUG00000007497PABPC410076.515ENSCHIG00000023385-10076.515Capra_hircus
ENSMMUG00000007497PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSMMUG00000007497PABPC410099.545ENSTSYG00000006532PABPC410099.545Carlito_syrichta
ENSMMUG00000007497PABPC49999.544ENSCAPG00000015984PABPC410099.544Cavia_aperea
ENSMMUG00000007497PABPC410099.545ENSCPOG00000009552PABPC410099.545Cavia_porcellus
ENSMMUG00000007497PABPC410099.697ENSCCAG00000037306PABPC410099.697Cebus_capucinus
ENSMMUG00000007497PABPC4100100.000ENSCATG00000042164PABPC4100100.000Cercocebus_atys
ENSMMUG00000007497PABPC410099.242ENSCLAG00000011899PABPC410099.242Chinchilla_lanigera
ENSMMUG00000007497PABPC4100100.000ENSCSAG00000001135PABPC4100100.000Chlorocebus_sabaeus
ENSMMUG00000007497PABPC48297.625ENSCHOG00000005327PABPC48197.625Choloepus_hoffmanni
ENSMMUG00000007497PABPC49987.709ENSCPBG00000001038PABPC410087.709Chrysemys_picta_bellii
ENSMMUG00000007497PABPC49999.846ENSCANG00000034177PABPC410099.846Colobus_angolensis_palliatus
ENSMMUG00000007497PABPC410097.440ENSCGRG00001018166Pabpc410097.440Cricetulus_griseus_chok1gshd
ENSMMUG00000007497PABPC49994.962ENSCGRG00000009777Pabpc410094.962Cricetulus_griseus_crigri
ENSMMUG00000007497PABPC410079.073ENSCSEG00000000130pabpc410079.522Cynoglossus_semilaevis
ENSMMUG00000007497PABPC49979.939ENSCVAG00000019246pabpc410080.851Cyprinodon_variegatus
ENSMMUG00000007497PABPC49981.487ENSDARG00000059259pabpc410081.319Danio_rerio
ENSMMUG00000007497PABPC49899.655ENSDNOG00000018444-9999.655Dasypus_novemcinctus
ENSMMUG00000007497PABPC410097.121ENSDORG00000011581Pabpc410097.121Dipodomys_ordii
ENSMMUG00000007497PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSMMUG00000007497PABPC48662.390ENSETEG00000009172-9962.435Echinops_telfairi
ENSMMUG00000007497PABPC49773.457ENSEBUG00000013782pabpc49972.466Eptatretus_burgeri
ENSMMUG00000007497PABPC49973.222ENSEBUG00000000992pabpc49980.346Eptatretus_burgeri
ENSMMUG00000007497PABPC410099.697ENSEASG00005014119PABPC410099.697Equus_asinus_asinus
ENSMMUG00000007497PABPC410099.697ENSECAG00000009396PABPC410099.697Equus_caballus
ENSMMUG00000007497PABPC410096.364ENSEEUG00000002962PABPC410096.364Erinaceus_europaeus
ENSMMUG00000007497PABPC49980.213ENSELUG00000003195pabpc49880.938Esox_lucius
ENSMMUG00000007497PABPC410099.394ENSFCAG00000015254-10099.394Felis_catus
ENSMMUG00000007497PABPC49986.950ENSFALG00000000543PABPC410086.950Ficedula_albicollis
ENSMMUG00000007497PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSMMUG00000007497PABPC410099.545ENSFDAG00000020016-10099.545Fukomys_damarensis
ENSMMUG00000007497PABPC410079.790ENSFHEG00000007548pabpc49688.578Fundulus_heteroclitus
ENSMMUG00000007497PABPC49979.336ENSGMOG00000019025pabpc49979.940Gadus_morhua
ENSMMUG00000007497PABPC49987.709ENSGALG00000003800PABPC410087.709Gallus_gallus
ENSMMUG00000007497PABPC410079.880ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSMMUG00000007497PABPC410078.027ENSGACG00000007179pabpc410078.838Gasterosteus_aculeatus
ENSMMUG00000007497PABPC49987.557ENSGAGG00000001888PABPC410087.557Gopherus_agassizii
ENSMMUG00000007497PABPC410099.848ENSGGOG00000004002PABPC410099.848Gorilla_gorilla
ENSMMUG00000007497PABPC410079.671ENSHBUG00000020206pabpc410080.269Haplochromis_burtoni
ENSMMUG00000007497PABPC410099.697ENSHGLG00000011162PABPC410099.697Heterocephalus_glaber_female
ENSMMUG00000007497PABPC410097.273ENSHGLG00100001580PABPC410097.273Heterocephalus_glaber_male
ENSMMUG00000007497PABPC410079.192ENSHCOG00000012694pabpc410079.641Hippocampus_comes
ENSMMUG00000007497PABPC49879.755ENSIPUG00000016620pabpc49980.330Ictalurus_punctatus
ENSMMUG00000007497PABPC410097.121ENSSTOG00000010416PABPC410097.121Ictidomys_tridecemlineatus
ENSMMUG00000007497PABPC410094.848ENSJJAG00000007781Pabpc410094.848Jaculus_jaculus
ENSMMUG00000007497PABPC49979.398ENSKMAG00000013597pabpc49979.669Kryptolebias_marmoratus
ENSMMUG00000007497PABPC410078.869ENSLBEG00000013654pabpc410079.583Labrus_bergylta
ENSMMUG00000007497PABPC49984.314ENSLACG00000011907PABPC410084.314Latimeria_chalumnae
ENSMMUG00000007497PABPC49982.078ENSLOCG00000001877pabpc49981.928Lepisosteus_oculatus
ENSMMUG00000007497PABPC410099.242ENSLAFG00000000151PABPC410099.242Loxodonta_africana
ENSMMUG00000007497PABPC4100100.000ENSMFAG00000041481PABPC4100100.000Macaca_fascicularis
ENSMMUG00000007497PABPC410099.848ENSMNEG00000043054PABPC410099.848Macaca_nemestrina
ENSMMUG00000007497PABPC4100100.000ENSMLEG00000040716PABPC4100100.000Mandrillus_leucophaeus
ENSMMUG00000007497PABPC49979.545ENSMAMG00000010025pabpc49980.000Mastacembelus_armatus
ENSMMUG00000007497PABPC410079.372ENSMZEG00005006141pabpc49290.807Maylandia_zebra
ENSMMUG00000007497PABPC49987.081ENSMGAG00000005408PABPC410087.081Meleagris_gallopavo
ENSMMUG00000007497PABPC47495.413ENSMAUG00000019763-8495.413Mesocricetus_auratus
ENSMMUG00000007497PABPC45581.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSMMUG00000007497PABPC46989.423ENSMAUG00000001295-9789.423Mesocricetus_auratus
ENSMMUG00000007497PABPC48995.431ENSMICG00000016633-9799.149Microcebus_murinus
ENSMMUG00000007497PABPC49973.480ENSMICG00000036729-10076.014Microcebus_murinus
ENSMMUG00000007497PABPC410097.892ENSMOCG00000006763Pabpc410097.892Microtus_ochrogaster
ENSMMUG00000007497PABPC410074.815ENSMMOG00000002363pabpc49975.852Mola_mola
ENSMMUG00000007497PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSMMUG00000007497PABPC45674.011ENSMODG00000018051-9174.011Monodelphis_domestica
ENSMMUG00000007497PABPC49979.154ENSMALG00000011017pabpc410079.285Monopterus_albus
ENSMMUG00000007497PABPC410097.576MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSMMUG00000007497PABPC49983.898MGP_CAROLIEiJ_G0024864-10083.898Mus_caroli
ENSMMUG00000007497PABPC410098.030ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSMMUG00000007497PABPC49997.696MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSMMUG00000007497PABPC49978.752MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSMMUG00000007497PABPC410099.394ENSMPUG00000014414-10099.394Mustela_putorius_furo
ENSMMUG00000007497PABPC49551.343ENSMPUG00000006836-10051.185Mustela_putorius_furo
ENSMMUG00000007497PABPC410092.424ENSMLUG00000012068PABPC410092.424Myotis_lucifugus
ENSMMUG00000007497PABPC410096.970ENSNGAG00000018292Pabpc410096.970Nannospalax_galili
ENSMMUG00000007497PABPC46486.441ENSNBRG00000010047-7586.441Neolamprologus_brichardi
ENSMMUG00000007497PABPC45792.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSMMUG00000007497PABPC410097.576ENSNLEG00000011928PABPC410097.576Nomascus_leucogenys
ENSMMUG00000007497PABPC48298.737ENSOPRG00000011984PABPC48798.737Ochotona_princeps
ENSMMUG00000007497PABPC410098.636ENSODEG00000006592-10098.636Octodon_degus
ENSMMUG00000007497PABPC49989.528ENSODEG00000017434-10089.409Octodon_degus
ENSMMUG00000007497PABPC45085.714ENSODEG00000013457-10085.714Octodon_degus
ENSMMUG00000007497PABPC410079.671ENSONIG00000008176pabpc410079.970Oreochromis_niloticus
ENSMMUG00000007497PABPC49987.405ENSOANG00000010001PABPC410087.405Ornithorhynchus_anatinus
ENSMMUG00000007497PABPC49699.367ENSOCUG00000000562PABPC48899.367Oryctolagus_cuniculus
ENSMMUG00000007497PABPC49991.049ENSORLG00000017479pabpc49991.049Oryzias_latipes
ENSMMUG00000007497PABPC49991.049ENSORLG00020018644pabpc49991.049Oryzias_latipes_hni
ENSMMUG00000007497PABPC49991.049ENSORLG00015015042pabpc49991.049Oryzias_latipes_hsok
ENSMMUG00000007497PABPC49979.848ENSOMEG00000014410pabpc49983.468Oryzias_melastigma
ENSMMUG00000007497PABPC410096.983ENSOGAG00000004067PABPC410096.983Otolemur_garnettii
ENSMMUG00000007497PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSMMUG00000007497PABPC410099.848ENSPPAG00000043625PABPC410099.848Pan_paniscus
ENSMMUG00000007497PABPC410099.394ENSPPRG00000024727PABPC410099.394Panthera_pardus
ENSMMUG00000007497PABPC410099.394ENSPTIG00000005829PABPC410099.394Panthera_tigris_altaica
ENSMMUG00000007497PABPC410099.848ENSPTRG00000000573PABPC410099.848Pan_troglodytes
ENSMMUG00000007497PABPC410099.848ENSPANG00000009484PABPC410099.848Papio_anubis
ENSMMUG00000007497PABPC49981.089ENSPKIG00000025356pabpc49981.694Paramormyrops_kingsleyae
ENSMMUG00000007497PABPC49987.709ENSPSIG00000016892PABPC410087.709Pelodiscus_sinensis
ENSMMUG00000007497PABPC410072.455ENSPMGG00000009073pabpc49977.039Periophthalmus_magnuspinnatus
ENSMMUG00000007497PABPC410097.424ENSPEMG00000023569-9997.424Peromyscus_maniculatus_bairdii
ENSMMUG00000007497PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSMMUG00000007497PABPC48970.132ENSPMAG00000002836pabpc410070.297Petromyzon_marinus
ENSMMUG00000007497PABPC49667.698ENSPMAG00000007885pabpc410066.854Petromyzon_marinus
ENSMMUG00000007497PABPC49888.717ENSPCIG00000020674PABPC410093.810Phascolarctos_cinereus
ENSMMUG00000007497PABPC410079.192ENSPFOG00000002682pabpc410079.940Poecilia_formosa
ENSMMUG00000007497PABPC410079.042ENSPLAG00000010112pabpc410080.389Poecilia_latipinna
ENSMMUG00000007497PABPC49979.635ENSPMEG00000019739pabpc410080.090Poecilia_mexicana
ENSMMUG00000007497PABPC410083.447ENSPREG00000001589pabpc410083.447Poecilia_reticulata
ENSMMUG00000007497PABPC410099.848ENSPPYG00000001506PABPC410099.848Pongo_abelii
ENSMMUG00000007497PABPC410094.394ENSPCAG00000003341PABPC410094.394Procavia_capensis
ENSMMUG00000007497PABPC49982.173ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSMMUG00000007497PABPC410099.697ENSPCOG00000023725-10099.697Propithecus_coquereli
ENSMMUG00000007497PABPC49998.824ENSPVAG00000002187PABPC410098.824Pteropus_vampyrus
ENSMMUG00000007497PABPC410079.522ENSPNYG00000006134pabpc410080.120Pundamilia_nyererei
ENSMMUG00000007497PABPC410079.940ENSPNAG00000024355pabpc410080.090Pygocentrus_nattereri
ENSMMUG00000007497PABPC410095.758ENSRNOG00000015642Pabpc410095.758Rattus_norvegicus
ENSMMUG00000007497PABPC410093.636ENSRNOG00000028592AABR07035074.110093.636Rattus_norvegicus
ENSMMUG00000007497PABPC4100100.000ENSRBIG00000039761PABPC4100100.000Rhinopithecus_bieti
ENSMMUG00000007497PABPC4100100.000ENSRROG00000033355PABPC4100100.000Rhinopithecus_roxellana
ENSMMUG00000007497PABPC410099.545ENSSBOG00000026193PABPC410099.545Saimiri_boliviensis_boliviensis
ENSMMUG00000007497PABPC49888.563ENSSHAG00000018139PABPC410088.164Sarcophilus_harrisii
ENSMMUG00000007497PABPC49981.975ENSSFOG00015023514pabpc49981.875Scleropages_formosus
ENSMMUG00000007497PABPC49979.274ENSSMAG00000009007pabpc49980.030Scophthalmus_maximus
ENSMMUG00000007497PABPC49979.242ENSSDUG00000012683pabpc49588.046Seriola_dumerili
ENSMMUG00000007497PABPC49979.242ENSSLDG00000013025pabpc49785.588Seriola_lalandi_dorsalis
ENSMMUG00000007497PABPC410092.121ENSSARG00000000310PABPC410092.121Sorex_araneus
ENSMMUG00000007497PABPC49987.405ENSSPUG00000003204PABPC410087.253Sphenodon_punctatus
ENSMMUG00000007497PABPC49990.562ENSSPAG00000009252pabpc49979.136Stegastes_partitus
ENSMMUG00000007497PABPC48950.337ENSSSCG00000036170-9650.337Sus_scrofa
ENSMMUG00000007497PABPC410099.242ENSSSCG00000003660-10099.242Sus_scrofa
ENSMMUG00000007497PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSMMUG00000007497PABPC410078.743ENSTRUG00000005907pabpc49979.279Takifugu_rubripes
ENSMMUG00000007497PABPC410075.716ENSTNIG00000016902pabpc49975.716Tetraodon_nigroviridis
ENSMMUG00000007497PABPC49988.571ENSTBEG00000009035PABPC410088.571Tupaia_belangeri
ENSMMUG00000007497PABPC49983.333ENSTTRG00000014340PABPC410087.059Tursiops_truncatus
ENSMMUG00000007497PABPC410099.091ENSUAMG00000000303PABPC410099.091Ursus_americanus
ENSMMUG00000007497PABPC410099.091ENSUMAG00000019585PABPC410099.091Ursus_maritimus
ENSMMUG00000007497PABPC48497.872ENSVPAG00000010041PABPC47797.872Vicugna_pacos
ENSMMUG00000007497PABPC410099.242ENSVVUG00000005215PABPC410099.242Vulpes_vulpes
ENSMMUG00000007497PABPC45697.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSMMUG00000007497PABPC49979.818ENSXETG00000010946pabpc410079.818Xenopus_tropicalis
ENSMMUG00000007497PABPC49978.073ENSXCOG00000013190pabpc49690.094Xiphophorus_couchianus
ENSMMUG00000007497PABPC410079.341ENSXMAG00000019007pabpc410080.240Xiphophorus_maculatus

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