EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000007709 (Gene tree)
Gene ID: 699931
Gene Symbol: CRNKL1
Alias: CLF|CRN|Clf1|SYF3
Full Name: crooked neck pre-mRNA splicing factor 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 22017 bases
Position: chr10:53185915-53207931
Accession: 699931
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000037420	Suf	PF05843.14	6.1e-11	1	1
ENSMMUP00000037420	HAT	PF02184.16	7.7e-43	1	2
ENSMMUP00000037420	HAT	PF02184.16	7.7e-43	2	2
ENSMMUP00000010128	HAT	PF02184.16	3.2e-32	1	2
ENSMMUP00000010128	HAT	PF02184.16	3.2e-32	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000010797	CRNKL1-202	2526	-	ENSMMUP00000010128	841 (aa)	-	F7C9W4
ENSMMUT00000044404	CRNKL1-201	4254	XM_015149577	ENSMMUP00000037420	687 (aa)	XP_015005063	F6T9A8

Gene Model

Click here to download ENSMMUG00000007709's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000007709's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000007709	CRNKL1	100	99.709	ENSG00000101343	CRNKL1	100	99.709	Homo_sapiens
ENSMMUG00000007709	CRNKL1	99	85.839	ENSAPOG00000009705	crnkl1	98	85.588	Acanthochromis_polyacanthus
ENSMMUG00000007709	CRNKL1	100	97.380	ENSAMEG00000000270	CRNKL1	99	87.232	Ailuropoda_melanoleuca
ENSMMUG00000007709	CRNKL1	97	86.637	ENSACIG00000015267	crnkl1	89	86.637	Amphilophus_citrinellus
ENSMMUG00000007709	CRNKL1	99	85.985	ENSAOCG00000021964	crnkl1	91	85.985	Amphiprion_ocellaris
ENSMMUG00000007709	CRNKL1	99	85.839	ENSAPEG00000015041	crnkl1	91	85.839	Amphiprion_percula
ENSMMUG00000007709	CRNKL1	99	85.588	ENSATEG00000001068	crnkl1	89	85.588	Anabas_testudineus
ENSMMUG00000007709	CRNKL1	99	90.247	ENSAPLG00000013105	CRNKL1	99	90.247	Anas_platyrhynchos
ENSMMUG00000007709	CRNKL1	99	92.533	ENSACAG00000005284	CRNKL1	99	92.533	Anolis_carolinensis
ENSMMUG00000007709	CRNKL1	92	99.525	ENSANAG00000024889	CRNKL1	100	99.525	Aotus_nancymaae
ENSMMUG00000007709	CRNKL1	99	87.001	ENSACLG00000010813	crnkl1	90	87.001	Astatotilapia_calliptera
ENSMMUG00000007709	CRNKL1	97	87.199	ENSAMXG00000018334	crnkl1	92	85.985	Astyanax_mexicanus
ENSMMUG00000007709	CRNKL1	100	96.652	ENSBTAG00000008472	CRNKL1	99	96.652	Bos_taurus
ENSMMUG00000007709	CRNKL1	93	62.986	WBGene00019762	M03F8.3	90	62.500	Caenorhabditis_elegans
ENSMMUG00000007709	CRNKL1	100	99.418	ENSCJAG00000005393	CRNKL1	100	99.418	Callithrix_jacchus
ENSMMUG00000007709	CRNKL1	100	97.089	ENSCAFG00000005333	CRNKL1	94	97.089	Canis_familiaris
ENSMMUG00000007709	CRNKL1	100	97.089	ENSCAFG00020027488	CRNKL1	100	97.089	Canis_lupus_dingo
ENSMMUG00000007709	CRNKL1	100	95.488	ENSCHIG00000013171	CRNKL1	99	95.488	Capra_hircus
ENSMMUG00000007709	CRNKL1	100	98.399	ENSTSYG00000004197	CRNKL1	100	98.399	Carlito_syrichta
ENSMMUG00000007709	CRNKL1	95	94.992	ENSCAPG00000010501	CRNKL1	99	94.992	Cavia_aperea
ENSMMUG00000007709	CRNKL1	100	95.342	ENSCPOG00000004418	CRNKL1	100	95.342	Cavia_porcellus
ENSMMUG00000007709	CRNKL1	100	99.418	ENSCCAG00000027037	CRNKL1	100	99.418	Cebus_capucinus
ENSMMUG00000007709	CRNKL1	100	100.000	ENSCATG00000034247	CRNKL1	100	100.000	Cercocebus_atys
ENSMMUG00000007709	CRNKL1	100	95.924	ENSCLAG00000013859	CRNKL1	100	95.924	Chinchilla_lanigera
ENSMMUG00000007709	CRNKL1	100	100.000	ENSCSAG00000011434	CRNKL1	100	100.000	Chlorocebus_sabaeus
ENSMMUG00000007709	CRNKL1	100	96.507	ENSCHOG00000006371	CRNKL1	99	85.731	Choloepus_hoffmanni
ENSMMUG00000007709	CRNKL1	99	92.847	ENSCPBG00000023501	CRNKL1	99	92.847	Chrysemys_picta_bellii
ENSMMUG00000007709	CRNKL1	96	69.940	ENSCING00000002709	-	99	68.421	Ciona_intestinalis
ENSMMUG00000007709	CRNKL1	100	99.854	ENSCANG00000038789	CRNKL1	100	99.854	Colobus_angolensis_palliatus
ENSMMUG00000007709	CRNKL1	100	96.361	ENSCGRG00001001115	-	99	96.361	Cricetulus_griseus_chok1gshd
ENSMMUG00000007709	CRNKL1	100	96.361	ENSCGRG00001000687	-	99	96.361	Cricetulus_griseus_chok1gshd
ENSMMUG00000007709	CRNKL1	100	96.361	ENSCGRG00000007854	Crnkl1	99	96.361	Cricetulus_griseus_crigri
ENSMMUG00000007709	CRNKL1	99	85.714	ENSCSEG00000005594	crnkl1	86	85.714	Cynoglossus_semilaevis
ENSMMUG00000007709	CRNKL1	97	86.637	ENSCVAG00000015172	crnkl1	92	84.818	Cyprinodon_variegatus
ENSMMUG00000007709	CRNKL1	96	86.707	ENSDARG00000007901	crnkl1	91	85.088	Danio_rerio
ENSMMUG00000007709	CRNKL1	99	97.076	ENSDNOG00000016226	CRNKL1	95	97.076	Dasypus_novemcinctus
ENSMMUG00000007709	CRNKL1	99	86.091	ENSDORG00000030174	-	99	86.091	Dipodomys_ordii
ENSMMUG00000007709	CRNKL1	99	86.530	ENSDORG00000023724	-	99	86.530	Dipodomys_ordii
ENSMMUG00000007709	CRNKL1	100	94.949	ENSDORG00000000394	-	100	94.949	Dipodomys_ordii
ENSMMUG00000007709	CRNKL1	97	69.300	FBgn0000377	crn	96	69.300	Drosophila_melanogaster
ENSMMUG00000007709	CRNKL1	100	84.279	ENSETEG00000003711	CRNKL1	100	75.089	Echinops_telfairi
ENSMMUG00000007709	CRNKL1	99	58.022	ENSEBUG00000013461	crnkl1	96	57.833	Eptatretus_burgeri
ENSMMUG00000007709	CRNKL1	100	97.089	ENSEASG00005002072	CRNKL1	100	97.089	Equus_asinus_asinus
ENSMMUG00000007709	CRNKL1	100	97.089	ENSECAG00000022215	CRNKL1	100	97.089	Equus_caballus
ENSMMUG00000007709	CRNKL1	99	94.118	ENSEEUG00000000413	CRNKL1	100	88.415	Erinaceus_europaeus
ENSMMUG00000007709	CRNKL1	97	85.479	ENSELUG00000015424	crnkl1	97	84.503	Esox_lucius
ENSMMUG00000007709	CRNKL1	100	97.380	ENSFCAG00000000714	CRNKL1	100	97.380	Felis_catus
ENSMMUG00000007709	CRNKL1	98	91.518	ENSFALG00000004611	CRNKL1	100	91.518	Ficedula_albicollis
ENSMMUG00000007709	CRNKL1	100	95.633	ENSFDAG00000000604	CRNKL1	100	95.633	Fukomys_damarensis
ENSMMUG00000007709	CRNKL1	98	85.884	ENSFHEG00000013163	crnkl1	88	85.884	Fundulus_heteroclitus
ENSMMUG00000007709	CRNKL1	97	85.479	ENSGMOG00000007609	crnkl1	94	84.164	Gadus_morhua
ENSMMUG00000007709	CRNKL1	99	93.285	ENSGALG00000008429	CRNKL1	99	93.285	Gallus_gallus
ENSMMUG00000007709	CRNKL1	97	86.186	ENSGAFG00000014249	crnkl1	90	84.526	Gambusia_affinis
ENSMMUG00000007709	CRNKL1	99	84.279	ENSGACG00000011852	crnkl1	92	84.279	Gasterosteus_aculeatus
ENSMMUG00000007709	CRNKL1	95	91.616	ENSGAGG00000021233	CRNKL1	100	91.667	Gopherus_agassizii
ENSMMUG00000007709	CRNKL1	100	99.709	ENSGGOG00000014176	CRNKL1	100	99.709	Gorilla_gorilla
ENSMMUG00000007709	CRNKL1	99	86.854	ENSHBUG00000005246	crnkl1	90	86.854	Haplochromis_burtoni
ENSMMUG00000007709	CRNKL1	100	95.779	ENSHGLG00000010856	CRNKL1	100	95.779	Heterocephalus_glaber_female
ENSMMUG00000007709	CRNKL1	100	95.779	ENSHGLG00100011521	CRNKL1	100	95.779	Heterocephalus_glaber_male
ENSMMUG00000007709	CRNKL1	97	84.108	ENSHCOG00000006420	crnkl1	98	82.698	Hippocampus_comes
ENSMMUG00000007709	CRNKL1	94	86.749	ENSIPUG00000006751	crnkl1	93	85.075	Ictalurus_punctatus
ENSMMUG00000007709	CRNKL1	93	68.446	ENSIPUG00000000315	-	100	69.654	Ictalurus_punctatus
ENSMMUG00000007709	CRNKL1	97	75.489	ENSIPUG00000006836	-	98	74.926	Ictalurus_punctatus
ENSMMUG00000007709	CRNKL1	100	97.089	ENSSTOG00000014747	CRNKL1	100	97.089	Ictidomys_tridecemlineatus
ENSMMUG00000007709	CRNKL1	100	94.452	ENSJJAG00000016926	Crnkl1	100	94.452	Jaculus_jaculus
ENSMMUG00000007709	CRNKL1	99	86.283	ENSKMAG00000003620	crnkl1	86	86.283	Kryptolebias_marmoratus
ENSMMUG00000007709	CRNKL1	97	70.877	ENSLBEG00000003543	crnkl1	91	71.239	Labrus_bergylta
ENSMMUG00000007709	CRNKL1	99	87.555	ENSLACG00000001129	CRNKL1	99	87.555	Latimeria_chalumnae
ENSMMUG00000007709	CRNKL1	97	88.554	ENSLOCG00000016889	crnkl1	94	87.592	Lepisosteus_oculatus
ENSMMUG00000007709	CRNKL1	100	96.802	ENSLAFG00000004512	CRNKL1	100	96.802	Loxodonta_africana
ENSMMUG00000007709	CRNKL1	100	100.000	ENSMFAG00000039893	CRNKL1	100	100.000	Macaca_fascicularis
ENSMMUG00000007709	CRNKL1	100	100.000	ENSMNEG00000037490	CRNKL1	100	100.000	Macaca_nemestrina
ENSMMUG00000007709	CRNKL1	100	100.000	ENSMLEG00000034885	CRNKL1	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000007709	CRNKL1	98	86.607	ENSMAMG00000008757	crnkl1	89	86.607	Mastacembelus_armatus
ENSMMUG00000007709	CRNKL1	99	87.001	ENSMZEG00005022345	crnkl1	90	87.001	Maylandia_zebra
ENSMMUG00000007709	CRNKL1	99	92.566	ENSMGAG00000003452	CRNKL1	94	92.566	Meleagris_gallopavo
ENSMMUG00000007709	CRNKL1	100	96.215	ENSMAUG00000020764	Crnkl1	99	96.215	Mesocricetus_auratus
ENSMMUG00000007709	CRNKL1	100	98.690	ENSMICG00000006048	CRNKL1	100	98.690	Microcebus_murinus
ENSMMUG00000007709	CRNKL1	100	88.269	ENSMOCG00000000681	-	99	88.269	Microtus_ochrogaster
ENSMMUG00000007709	CRNKL1	97	69.670	ENSMOCG00000004179	-	96	69.881	Microtus_ochrogaster
ENSMMUG00000007709	CRNKL1	92	85.261	ENSMMOG00000017601	crnkl1	97	85.261	Mola_mola
ENSMMUG00000007709	CRNKL1	100	86.026	ENSMODG00000010857	-	99	86.026	Monodelphis_domestica
ENSMMUG00000007709	CRNKL1	100	91.523	ENSMODG00000005961	-	99	91.523	Monodelphis_domestica
ENSMMUG00000007709	CRNKL1	98	62.998	ENSMALG00000011211	crnkl1	87	64.148	Monopterus_albus
ENSMMUG00000007709	CRNKL1	100	96.361	MGP_CAROLIEiJ_G0024394	Crnkl1	99	96.361	Mus_caroli
ENSMMUG00000007709	CRNKL1	100	96.361	ENSMUSG00000001767	Crnkl1	99	96.361	Mus_musculus
ENSMMUG00000007709	CRNKL1	100	94.614	MGP_PahariEiJ_G0025838	Crnkl1	99	94.614	Mus_pahari
ENSMMUG00000007709	CRNKL1	100	96.215	MGP_SPRETEiJ_G0025312	Crnkl1	99	96.215	Mus_spretus
ENSMMUG00000007709	CRNKL1	100	97.525	ENSMPUG00000001226	CRNKL1	100	97.525	Mustela_putorius_furo
ENSMMUG00000007709	CRNKL1	100	96.366	ENSMLUG00000016513	CRNKL1	100	89.413	Myotis_lucifugus
ENSMMUG00000007709	CRNKL1	100	94.571	ENSNGAG00000023097	Crnkl1	100	94.571	Nannospalax_galili
ENSMMUG00000007709	CRNKL1	99	87.149	ENSNBRG00000007867	crnkl1	89	87.149	Neolamprologus_brichardi
ENSMMUG00000007709	CRNKL1	100	96.361	ENSNLEG00000009862	CRNKL1	100	96.361	Nomascus_leucogenys
ENSMMUG00000007709	CRNKL1	98	94.478	ENSMEUG00000012167	-	100	94.478	Notamacropus_eugenii
ENSMMUG00000007709	CRNKL1	100	84.884	ENSMEUG00000002361	-	99	84.884	Notamacropus_eugenii
ENSMMUG00000007709	CRNKL1	82	64.885	ENSOPRG00000009242	-	82	64.885	Ochotona_princeps
ENSMMUG00000007709	CRNKL1	100	95.924	ENSODEG00000012175	CRNKL1	100	95.924	Octodon_degus
ENSMMUG00000007709	CRNKL1	99	86.696	ENSONIG00000018728	crnkl1	89	87.445	Oreochromis_niloticus
ENSMMUG00000007709	CRNKL1	99	96.356	ENSOCUG00000015484	CRNKL1	99	85.409	Oryctolagus_cuniculus
ENSMMUG00000007709	CRNKL1	97	85.135	ENSORLG00000017240	crnkl1	94	81.426	Oryzias_latipes
ENSMMUG00000007709	CRNKL1	97	85.285	ENSORLG00020001742	crnkl1	89	85.285	Oryzias_latipes_hni
ENSMMUG00000007709	CRNKL1	97	85.285	ENSORLG00015019564	crnkl1	89	85.285	Oryzias_latipes_hsok
ENSMMUG00000007709	CRNKL1	99	84.234	ENSOMEG00000019895	crnkl1	91	84.234	Oryzias_melastigma
ENSMMUG00000007709	CRNKL1	100	98.544	ENSOGAG00000011544	CRNKL1	100	98.544	Otolemur_garnettii
ENSMMUG00000007709	CRNKL1	100	96.652	ENSOARG00000002150	CRNKL1	99	89.909	Ovis_aries
ENSMMUG00000007709	CRNKL1	100	98.399	ENSPPAG00000027847	CRNKL1	100	90.353	Pan_paniscus
ENSMMUG00000007709	CRNKL1	100	97.380	ENSPPRG00000001955	CRNKL1	100	97.380	Panthera_pardus
ENSMMUG00000007709	CRNKL1	100	97.380	ENSPTIG00000007393	CRNKL1	100	97.380	Panthera_tigris_altaica
ENSMMUG00000007709	CRNKL1	100	99.563	ENSPTRG00000030609	CRNKL1	100	99.563	Pan_troglodytes
ENSMMUG00000007709	CRNKL1	100	100.000	ENSPANG00000017420	CRNKL1	100	100.000	Papio_anubis
ENSMMUG00000007709	CRNKL1	96	81.654	ENSPKIG00000017093	crnkl1	88	81.361	Paramormyrops_kingsleyae
ENSMMUG00000007709	CRNKL1	99	91.654	ENSPSIG00000012705	CRNKL1	99	91.654	Pelodiscus_sinensis
ENSMMUG00000007709	CRNKL1	99	78.824	ENSPMGG00000006263	crnkl1	96	78.824	Periophthalmus_magnuspinnatus
ENSMMUG00000007709	CRNKL1	100	96.507	ENSPEMG00000000073	-	99	96.507	Peromyscus_maniculatus_bairdii
ENSMMUG00000007709	CRNKL1	99	81.541	ENSPMAG00000002250	crnkl1	99	81.541	Petromyzon_marinus
ENSMMUG00000007709	CRNKL1	100	93.741	ENSPCIG00000025825	CRNKL1	96	93.741	Phascolarctos_cinereus
ENSMMUG00000007709	CRNKL1	97	86.036	ENSPFOG00000005102	crnkl1	93	84.302	Poecilia_formosa
ENSMMUG00000007709	CRNKL1	97	86.036	ENSPLAG00000007288	crnkl1	90	84.180	Poecilia_latipinna
ENSMMUG00000007709	CRNKL1	97	86.186	ENSPMEG00000008865	crnkl1	93	84.448	Poecilia_mexicana
ENSMMUG00000007709	CRNKL1	97	85.736	ENSPREG00000012615	crnkl1	92	84.064	Poecilia_reticulata
ENSMMUG00000007709	CRNKL1	100	99.709	ENSPPYG00000010747	CRNKL1	100	93.911	Pongo_abelii
ENSMMUG00000007709	CRNKL1	99	91.176	ENSPCAG00000003296	CRNKL1	99	82.678	Procavia_capensis
ENSMMUG00000007709	CRNKL1	100	97.380	ENSPCOG00000017608	CRNKL1	100	87.104	Propithecus_coquereli
ENSMMUG00000007709	CRNKL1	100	97.671	ENSPVAG00000006207	CRNKL1	100	88.109	Pteropus_vampyrus
ENSMMUG00000007709	CRNKL1	99	86.854	ENSPNYG00000001977	crnkl1	90	86.854	Pundamilia_nyererei
ENSMMUG00000007709	CRNKL1	98	87.761	ENSPNAG00000001507	crnkl1	98	82.969	Pygocentrus_nattereri
ENSMMUG00000007709	CRNKL1	100	96.361	ENSRNOG00000010587	Crnkl1	99	96.361	Rattus_norvegicus
ENSMMUG00000007709	CRNKL1	100	95.924	ENSRNOG00000040045	Crnkl1	99	95.924	Rattus_norvegicus
ENSMMUG00000007709	CRNKL1	100	99.854	ENSRBIG00000031770	CRNKL1	100	99.854	Rhinopithecus_bieti
ENSMMUG00000007709	CRNKL1	100	99.709	ENSRROG00000040450	CRNKL1	100	99.709	Rhinopithecus_roxellana
ENSMMUG00000007709	CRNKL1	94	37.536	YLR117C	CLF1	99	37.627	Saccharomyces_cerevisiae
ENSMMUG00000007709	CRNKL1	100	99.418	ENSSBOG00000029672	CRNKL1	100	99.418	Saimiri_boliviensis_boliviensis
ENSMMUG00000007709	CRNKL1	96	74.659	ENSSHAG00000011199	CRNKL1	99	74.659	Sarcophilus_harrisii
ENSMMUG00000007709	CRNKL1	96	86.858	ENSSFOG00015000946	crnkl1	89	85.088	Scleropages_formosus
ENSMMUG00000007709	CRNKL1	99	84.402	ENSSMAG00000007933	crnkl1	89	84.402	Scophthalmus_maximus
ENSMMUG00000007709	CRNKL1	99	78.863	ENSSDUG00000012625	crnkl1	87	79.646	Seriola_dumerili
ENSMMUG00000007709	CRNKL1	99	85.547	ENSSLDG00000021413	crnkl1	88	86.411	Seriola_lalandi_dorsalis
ENSMMUG00000007709	CRNKL1	100	96.361	ENSSARG00000006443	CRNKL1	99	82.959	Sorex_araneus
ENSMMUG00000007709	CRNKL1	99	92.094	ENSSPUG00000005254	CRNKL1	99	92.094	Sphenodon_punctatus
ENSMMUG00000007709	CRNKL1	99	85.693	ENSSPAG00000016150	crnkl1	89	85.693	Stegastes_partitus
ENSMMUG00000007709	CRNKL1	100	97.089	ENSSSCG00000038587	CRNKL1	99	97.089	Sus_scrofa
ENSMMUG00000007709	CRNKL1	99	91.691	ENSTGUG00000007645	CRNKL1	98	91.691	Taeniopygia_guttata
ENSMMUG00000007709	CRNKL1	98	80.149	ENSTRUG00000015417	crnkl1	90	79.529	Takifugu_rubripes
ENSMMUG00000007709	CRNKL1	97	84.708	ENSTNIG00000010710	crnkl1	99	83.236	Tetraodon_nigroviridis
ENSMMUG00000007709	CRNKL1	92	97.152	ENSTBEG00000001304	CRNKL1	100	84.383	Tupaia_belangeri
ENSMMUG00000007709	CRNKL1	91	93.280	ENSTTRG00000000484	CRNKL1	100	82.724	Tursiops_truncatus
ENSMMUG00000007709	CRNKL1	100	97.380	ENSUAMG00000018586	CRNKL1	100	97.380	Ursus_americanus
ENSMMUG00000007709	CRNKL1	100	97.380	ENSUMAG00000024957	CRNKL1	100	97.380	Ursus_maritimus
ENSMMUG00000007709	CRNKL1	100	97.089	ENSVVUG00000012559	CRNKL1	95	86.301	Vulpes_vulpes
ENSMMUG00000007709	CRNKL1	99	89.811	ENSXETG00000009698	crnkl1	99	89.811	Xenopus_tropicalis
ENSMMUG00000007709	CRNKL1	97	85.307	ENSXCOG00000000824	crnkl1	91	83.748	Xiphophorus_couchianus
ENSMMUG00000007709	CRNKL1	97	86.186	ENSXMAG00000006896	crnkl1	91	84.604	Xiphophorus_maculatus