EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000008611 (Gene tree)
Gene ID: 694817
Gene Symbol: RIF1
Alias: FLJ10599|FLJ12870
Full Name: replication timing regulatory factor 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 61188 bases
Position: chr12:37964698-38025885
Accession: 694817
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000011294	Rif1_N	PF12231.8	2e-77	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000012040	RIF1-201	7546	XM_015110090	ENSMMUP00000011294	2466 (aa)	XP_014965576	F6U9Z7

Gene Model

Click here to download ENSMMUG00000008611's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc04550	Signaling pathways regulating pluripotency of stem cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000008611's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000008611	RIF1	100	95.146	ENSG00000080345	RIF1	97	98.538	Homo_sapiens
ENSMMUG00000008611	RIF1	51	48.574	ENSAPOG00000011073	rif1	50	48.246	Acanthochromis_polyacanthus
ENSMMUG00000008611	RIF1	99	80.234	ENSAMEG00000008461	RIF1	100	80.234	Ailuropoda_melanoleuca
ENSMMUG00000008611	RIF1	64	50.391	ENSACIG00000017765	rif1	69	50.391	Amphilophus_citrinellus
ENSMMUG00000008611	RIF1	64	48.571	ENSAOCG00000017231	rif1	64	48.571	Amphiprion_ocellaris
ENSMMUG00000008611	RIF1	65	48.289	ENSATEG00000022887	rif1	68	48.289	Anabas_testudineus
ENSMMUG00000008611	RIF1	85	65.889	ENSAPLG00000007092	RIF1	92	65.598	Anas_platyrhynchos
ENSMMUG00000008611	RIF1	87	55.342	ENSACAG00000003714	RIF1	92	55.342	Anolis_carolinensis
ENSMMUG00000008611	RIF1	100	90.453	ENSANAG00000024840	RIF1	100	90.453	Aotus_nancymaae
ENSMMUG00000008611	RIF1	94	79.072	ENSBTAG00000021020	RIF1	99	79.072	Bos_taurus
ENSMMUG00000008611	RIF1	100	89.567	ENSCJAG00000003138	RIF1	100	89.567	Callithrix_jacchus
ENSMMUG00000008611	RIF1	100	78.721	ENSCAFG00000005670	RIF1	97	78.810	Canis_familiaris
ENSMMUG00000008611	RIF1	100	78.154	ENSCAFG00020016401	RIF1	100	78.154	Canis_lupus_dingo
ENSMMUG00000008611	RIF1	100	79.170	ENSCHIG00000020327	RIF1	100	79.170	Capra_hircus
ENSMMUG00000008611	RIF1	99	79.831	ENSTSYG00000008861	RIF1	100	79.831	Carlito_syrichta
ENSMMUG00000008611	RIF1	79	86.047	ENSCAPG00000008957	RIF1	96	86.047	Cavia_aperea
ENSMMUG00000008611	RIF1	99	71.308	ENSCPOG00000037898	RIF1	99	71.227	Cavia_porcellus
ENSMMUG00000008611	RIF1	100	89.037	ENSCCAG00000024760	RIF1	100	89.037	Cebus_capucinus
ENSMMUG00000008611	RIF1	100	99.148	ENSCATG00000033353	RIF1	100	99.148	Cercocebus_atys
ENSMMUG00000008611	RIF1	96	74.414	ENSCLAG00000001517	RIF1	99	74.194	Chinchilla_lanigera
ENSMMUG00000008611	RIF1	100	98.418	ENSCSAG00000016089	RIF1	100	98.418	Chlorocebus_sabaeus
ENSMMUG00000008611	RIF1	97	76.957	ENSCHOG00000007187	RIF1	97	76.957	Choloepus_hoffmanni
ENSMMUG00000008611	RIF1	90	72.189	ENSCPBG00000025885	RIF1	96	73.373	Chrysemys_picta_bellii
ENSMMUG00000008611	RIF1	100	95.874	ENSCANG00000028962	RIF1	100	97.166	Colobus_angolensis_palliatus
ENSMMUG00000008611	RIF1	99	70.543	ENSCGRG00001024589	Rif1	100	70.543	Cricetulus_griseus_chok1gshd
ENSMMUG00000008611	RIF1	99	71.633	ENSCGRG00000010713	Rif1	100	71.633	Cricetulus_griseus_crigri
ENSMMUG00000008611	RIF1	51	48.949	ENSCVAG00000022479	rif1	53	48.949	Cyprinodon_variegatus
ENSMMUG00000008611	RIF1	99	76.923	ENSDNOG00000011194	RIF1	97	76.923	Dasypus_novemcinctus
ENSMMUG00000008611	RIF1	94	72.727	ENSETEG00000012421	RIF1	92	72.652	Echinops_telfairi
ENSMMUG00000008611	RIF1	96	87.755	ENSEASG00005023434	RIF1	98	91.749	Equus_asinus_asinus
ENSMMUG00000008611	RIF1	97	90.498	ENSECAG00000012679	RIF1	100	90.498	Equus_caballus
ENSMMUG00000008611	RIF1	65	50.796	ENSELUG00000006826	rif1	58	50.672	Esox_lucius
ENSMMUG00000008611	RIF1	100	79.477	ENSFCAG00000029742	RIF1	100	79.598	Felis_catus
ENSMMUG00000008611	RIF1	77	64.024	ENSFALG00000013874	RIF1	90	64.634	Ficedula_albicollis
ENSMMUG00000008611	RIF1	99	75.333	ENSFDAG00000006538	RIF1	99	75.333	Fukomys_damarensis
ENSMMUG00000008611	RIF1	65	50.122	ENSFHEG00000013721	rif1	68	50.081	Fundulus_heteroclitus
ENSMMUG00000008611	RIF1	54	50.000	ENSGMOG00000003517	rif1	82	50.000	Gadus_morhua
ENSMMUG00000008611	RIF1	79	64.706	ENSGALG00000012484	RIF1	91	64.706	Gallus_gallus
ENSMMUG00000008611	RIF1	66	50.278	ENSGAFG00000017196	rif1	75	51.704	Gambusia_affinis
ENSMMUG00000008611	RIF1	59	55.285	ENSGACG00000008579	rif1	66	54.800	Gasterosteus_aculeatus
ENSMMUG00000008611	RIF1	88	71.856	ENSGAGG00000012595	RIF1	97	72.973	Gopherus_agassizii
ENSMMUG00000008611	RIF1	90	98.569	ENSGGOG00000040178	RIF1	96	98.569	Gorilla_gorilla
ENSMMUG00000008611	RIF1	72	51.019	ENSHBUG00000007125	rif1	76	50.939	Haplochromis_burtoni
ENSMMUG00000008611	RIF1	95	75.405	ENSHGLG00100009807	RIF1	99	75.362	Heterocephalus_glaber_male
ENSMMUG00000008611	RIF1	63	48.683	ENSHCOG00000015943	rif1	60	48.576	Hippocampus_comes
ENSMMUG00000008611	RIF1	100	77.715	ENSSTOG00000020712	RIF1	100	77.675	Ictidomys_tridecemlineatus
ENSMMUG00000008611	RIF1	99	69.855	ENSJJAG00000023000	Rif1	100	69.895	Jaculus_jaculus
ENSMMUG00000008611	RIF1	63	49.761	ENSKMAG00000002852	rif1	66	49.761	Kryptolebias_marmoratus
ENSMMUG00000008611	RIF1	61	56.400	ENSLBEG00000023196	rif1	57	56.400	Labrus_bergylta
ENSMMUG00000008611	RIF1	86	56.892	ENSLACG00000005425	RIF1	92	56.892	Latimeria_chalumnae
ENSMMUG00000008611	RIF1	62	53.943	ENSLOCG00000002657	rif1	82	52.244	Lepisosteus_oculatus
ENSMMUG00000008611	RIF1	99	78.082	ENSLAFG00000009796	RIF1	100	78.082	Loxodonta_africana
ENSMMUG00000008611	RIF1	100	99.797	ENSMFAG00000032233	RIF1	100	99.797	Macaca_fascicularis
ENSMMUG00000008611	RIF1	100	99.392	ENSMNEG00000031616	RIF1	100	99.392	Macaca_nemestrina
ENSMMUG00000008611	RIF1	100	99.189	ENSMLEG00000042945	RIF1	100	99.189	Mandrillus_leucophaeus
ENSMMUG00000008611	RIF1	75	49.383	ENSMAMG00000001745	rif1	65	49.128	Mastacembelus_armatus
ENSMMUG00000008611	RIF1	64	50.988	ENSMZEG00005020920	rif1	68	50.870	Maylandia_zebra
ENSMMUG00000008611	RIF1	84	61.473	ENSMGAG00000012732	RIF1	91	61.473	Meleagris_gallopavo
ENSMMUG00000008611	RIF1	94	89.694	ENSMAUG00000013158	Rif1	99	89.694	Mesocricetus_auratus
ENSMMUG00000008611	RIF1	100	84.153	ENSMICG00000046127	RIF1	100	84.153	Microcebus_murinus
ENSMMUG00000008611	RIF1	99	70.137	ENSMOCG00000009381	Rif1	100	70.137	Microtus_ochrogaster
ENSMMUG00000008611	RIF1	50	49.721	ENSMMOG00000006519	rif1	63	49.642	Mola_mola
ENSMMUG00000008611	RIF1	100	60.265	ENSMODG00000003703	RIF1	100	60.305	Monodelphis_domestica
ENSMMUG00000008611	RIF1	67	49.277	ENSMALG00000016759	rif1	72	49.437	Monopterus_albus
ENSMMUG00000008611	RIF1	99	69.423	MGP_CAROLIEiJ_G0023555	Rif1	100	69.504	Mus_caroli
ENSMMUG00000008611	RIF1	99	70.028	ENSMUSG00000036202	Rif1	100	70.108	Mus_musculus
ENSMMUG00000008611	RIF1	99	68.483	MGP_PahariEiJ_G0025006	Rif1	100	68.442	Mus_pahari
ENSMMUG00000008611	RIF1	99	69.770	MGP_SPRETEiJ_G0024476	Rif1	100	69.770	Mus_spretus
ENSMMUG00000008611	RIF1	100	79.380	ENSMPUG00000000371	RIF1	100	79.380	Mustela_putorius_furo
ENSMMUG00000008611	RIF1	90	77.006	ENSMLUG00000003376	RIF1	100	77.006	Myotis_lucifugus
ENSMMUG00000008611	RIF1	100	73.285	ENSNGAG00000009268	Rif1	100	73.336	Nannospalax_galili
ENSMMUG00000008611	RIF1	68	50.723	ENSNBRG00000014257	rif1	73	49.882	Neolamprologus_brichardi
ENSMMUG00000008611	RIF1	100	93.312	ENSNLEG00000010955	RIF1	100	93.433	Nomascus_leucogenys
ENSMMUG00000008611	RIF1	80	78.222	ENSMEUG00000007601	-	87	78.222	Notamacropus_eugenii
ENSMMUG00000008611	RIF1	99	72.039	ENSODEG00000003950	RIF1	99	72.401	Octodon_degus
ENSMMUG00000008611	RIF1	51	51.190	ENSONIG00000013657	rif1	52	51.187	Oreochromis_niloticus
ENSMMUG00000008611	RIF1	84	66.423	ENSOANG00000006078	-	86	66.423	Ornithorhynchus_anatinus
ENSMMUG00000008611	RIF1	100	76.492	ENSOCUG00000017435	RIF1	100	76.492	Oryctolagus_cuniculus
ENSMMUG00000008611	RIF1	64	47.850	ENSORLG00020001302	rif1	69	48.478	Oryzias_latipes_hni
ENSMMUG00000008611	RIF1	62	48.010	ENSORLG00015000009	rif1	66	48.089	Oryzias_latipes_hsok
ENSMMUG00000008611	RIF1	62	49.282	ENSOMEG00000021513	rif1	67	49.010	Oryzias_melastigma
ENSMMUG00000008611	RIF1	99	81.411	ENSOGAG00000006141	RIF1	99	81.331	Otolemur_garnettii
ENSMMUG00000008611	RIF1	100	79.210	ENSOARG00000008930	RIF1	100	79.210	Ovis_aries
ENSMMUG00000008611	RIF1	100	95.067	ENSPPAG00000023754	RIF1	100	95.067	Pan_paniscus
ENSMMUG00000008611	RIF1	100	79.445	ENSPPRG00000003618	RIF1	100	79.566	Panthera_pardus
ENSMMUG00000008611	RIF1	100	79.485	ENSPTIG00000020652	RIF1	100	79.606	Panthera_tigris_altaica
ENSMMUG00000008611	RIF1	100	95.148	ENSPTRG00000012534	RIF1	100	95.148	Pan_troglodytes
ENSMMUG00000008611	RIF1	100	98.905	ENSPANG00000008525	RIF1	100	98.905	Papio_anubis
ENSMMUG00000008611	RIF1	63	51.855	ENSPKIG00000004267	rif1	68	51.878	Paramormyrops_kingsleyae
ENSMMUG00000008611	RIF1	66	46.343	ENSPMGG00000016141	rif1	82	45.202	Periophthalmus_magnuspinnatus
ENSMMUG00000008611	RIF1	99	72.020	ENSPEMG00000000446	Rif1	99	71.979	Peromyscus_maniculatus_bairdii
ENSMMUG00000008611	RIF1	99	59.280	ENSPCIG00000009185	RIF1	99	59.888	Phascolarctos_cinereus
ENSMMUG00000008611	RIF1	65	51.566	ENSPFOG00000017804	rif1	69	51.566	Poecilia_formosa
ENSMMUG00000008611	RIF1	58	51.801	ENSPFOG00000000554	-	67	51.708	Poecilia_formosa
ENSMMUG00000008611	RIF1	65	51.613	ENSPLAG00000017945	rif1	72	51.449	Poecilia_latipinna
ENSMMUG00000008611	RIF1	53	49.902	ENSPMEG00000006897	-	65	49.804	Poecilia_mexicana
ENSMMUG00000008611	RIF1	55	64.894	ENSPREG00000018052	rif1	69	54.314	Poecilia_reticulata
ENSMMUG00000008611	RIF1	100	95.267	ENSPPYG00000012846	RIF1	100	95.388	Pongo_abelii
ENSMMUG00000008611	RIF1	83	89.109	ENSPCAG00000009032	RIF1	83	89.109	Procavia_capensis
ENSMMUG00000008611	RIF1	100	84.556	ENSPCOG00000027888	RIF1	100	84.556	Propithecus_coquereli
ENSMMUG00000008611	RIF1	93	88.664	ENSPVAG00000014276	RIF1	95	88.664	Pteropus_vampyrus
ENSMMUG00000008611	RIF1	63	49.244	ENSPNYG00000012940	rif1	67	49.166	Pundamilia_nyererei
ENSMMUG00000008611	RIF1	99	68.650	ENSRNOG00000054901	Rif1	100	68.650	Rattus_norvegicus
ENSMMUG00000008611	RIF1	100	96.560	ENSRBIG00000003704	RIF1	100	96.560	Rhinopithecus_bieti
ENSMMUG00000008611	RIF1	100	97.693	ENSRROG00000028206	RIF1	100	97.693	Rhinopithecus_roxellana
ENSMMUG00000008611	RIF1	97	95.699	ENSSBOG00000029530	RIF1	100	95.699	Saimiri_boliviensis_boliviensis
ENSMMUG00000008611	RIF1	99	60.096	ENSSHAG00000018552	RIF1	100	59.218	Sarcophilus_harrisii
ENSMMUG00000008611	RIF1	50	49.961	ENSSMAG00000011704	rif1	67	48.753	Scophthalmus_maximus
ENSMMUG00000008611	RIF1	63	51.048	ENSSDUG00000015632	rif1	77	49.580	Seriola_dumerili
ENSMMUG00000008611	RIF1	50	50.598	ENSSLDG00000019531	rif1	52	49.246	Seriola_lalandi_dorsalis
ENSMMUG00000008611	RIF1	60	83.390	ENSSARG00000007161	-	61	83.390	Sorex_araneus
ENSMMUG00000008611	RIF1	93	70.659	ENSSPUG00000003062	RIF1	99	70.659	Sphenodon_punctatus
ENSMMUG00000008611	RIF1	50	57.495	ENSSPAG00000018359	rif1	76	57.495	Stegastes_partitus
ENSMMUG00000008611	RIF1	100	79.662	ENSSSCG00000016395	RIF1	100	79.662	Sus_scrofa
ENSMMUG00000008611	RIF1	72	49.603	ENSTRUG00000015808	rif1	79	48.638	Takifugu_rubripes
ENSMMUG00000008611	RIF1	68	48.054	ENSTNIG00000011538	rif1	72	47.745	Tetraodon_nigroviridis
ENSMMUG00000008611	RIF1	82	90.506	ENSTBEG00000016082	RIF1	82	90.506	Tupaia_belangeri
ENSMMUG00000008611	RIF1	100	80.258	ENSTTRG00000011190	RIF1	100	80.258	Tursiops_truncatus
ENSMMUG00000008611	RIF1	90	79.438	ENSUAMG00000026385	RIF1	99	79.438	Ursus_americanus
ENSMMUG00000008611	RIF1	100	80.258	ENSUMAG00000000337	RIF1	100	80.258	Ursus_maritimus
ENSMMUG00000008611	RIF1	100	78.445	ENSVPAG00000002162	RIF1	100	78.364	Vicugna_pacos
ENSMMUG00000008611	RIF1	100	78.145	ENSVVUG00000011293	RIF1	100	78.235	Vulpes_vulpes
ENSMMUG00000008611	RIF1	99	43.839	ENSXETG00000004530	rif1	99	43.927	Xenopus_tropicalis
ENSMMUG00000008611	RIF1	66	48.676	ENSXMAG00000000506	rif1	68	48.873	Xiphophorus_maculatus