EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000008818 (Gene tree)
Gene ID: 100430685
Gene Symbol: SMARCA1
Alias: ISWI|NURF140|SNF2L|SNF2L1|SNF2LB|SWI|hSNF2L
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 77215 bases
Position: chrX:123341580-123418794
Accession: 100430685
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000009888	ResIII	PF04851.15	8e-12	1	1
ENSMMUP00000011561	ResIII	PF04851.15	8.5e-12	1	1
ENSMMUP00000040831	ResIII	PF04851.15	8.6e-12	1	1
ENSMMUP00000009888	DEAD	PF00270.29	1.3e-06	1	1
ENSMMUP00000040831	DEAD	PF00270.29	1.5e-06	1	1
ENSMMUP00000011561	DEAD	PF00270.29	1.6e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000047802	SMARCA1-201	4223	XM_015128165	ENSMMUP00000040831	1042 (aa)	XP_014983651	F6TKC4
ENSMMUT00000012328	SMARCA1-202	3213	XM_002806391	ENSMMUP00000011561	1070 (aa)	XP_002806437	F7F0X3
ENSMMUT00000010539	SMARCA1-203	2892	-	ENSMMUP00000009888	963 (aa)	-	F6QC46

Gene Model

Click here to download ENSMMUG00000008818's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000008818's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000008818	SMARCA1	56	48.207	ENSMMUG00000017255	HELLS	79	48.207
ENSMMUG00000008818	SMARCA1	97	86.752	ENSMMUG00000000829	SMARCA5	98	86.164
ENSMMUG00000008818	SMARCA1	54	42.287	ENSMMUG00000020458	CHD6	75	40.048
ENSMMUG00000008818	SMARCA1	59	44.112	ENSMMUG00000009024	CHD1L	84	46.130
ENSMMUG00000008818	SMARCA1	57	44.048	ENSMMUG00000012042	SMARCA4	58	46.640

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000008818	SMARCA1	100	100.000	ENSG00000102038	SMARCA1	100	100.000	Homo_sapiens
ENSMMUG00000008818	SMARCA1	97	84.829	ENSAPOG00000016035	smarca5	96	85.281	Acanthochromis_polyacanthus
ENSMMUG00000008818	SMARCA1	100	97.009	ENSAMEG00000015218	SMARCA1	100	97.009	Ailuropoda_melanoleuca
ENSMMUG00000008818	SMARCA1	90	85.532	ENSACIG00000016982	smarca5	97	85.436	Amphilophus_citrinellus
ENSMMUG00000008818	SMARCA1	97	84.829	ENSAOCG00000015578	smarca5	93	83.884	Amphiprion_ocellaris
ENSMMUG00000008818	SMARCA1	97	84.829	ENSAPEG00000011117	smarca5	97	85.437	Amphiprion_percula
ENSMMUG00000008818	SMARCA1	97	85.070	ENSATEG00000012894	smarca5	95	83.213	Anabas_testudineus
ENSMMUG00000008818	SMARCA1	97	93.497	ENSAPLG00000013149	SMARCA1	100	92.153	Anas_platyrhynchos
ENSMMUG00000008818	SMARCA1	99	92.243	ENSACAG00000011376	SMARCA1	95	90.406	Anolis_carolinensis
ENSMMUG00000008818	SMARCA1	100	94.766	ENSANAG00000023098	SMARCA1	100	94.766	Aotus_nancymaae
ENSMMUG00000008818	SMARCA1	97	84.984	ENSACLG00000025356	smarca5	93	84.161	Astatotilapia_calliptera
ENSMMUG00000008818	SMARCA1	93	89.298	ENSAMXG00000011227	smarca1	99	90.182	Astyanax_mexicanus
ENSMMUG00000008818	SMARCA1	97	85.134	ENSAMXG00000005709	smarca5	92	85.174	Astyanax_mexicanus
ENSMMUG00000008818	SMARCA1	99	98.115	ENSBTAG00000002292	SMARCA1	99	97.429	Bos_taurus
ENSMMUG00000008818	SMARCA1	99	64.523	WBGene00002169	isw-1	97	62.911	Caenorhabditis_elegans
ENSMMUG00000008818	SMARCA1	100	99.626	ENSCJAG00000002868	SMARCA1	100	99.626	Callithrix_jacchus
ENSMMUG00000008818	SMARCA1	100	88.941	ENSCAFG00000018673	SMARCA1	98	89.015	Canis_familiaris
ENSMMUG00000008818	SMARCA1	99	98.647	ENSCAFG00020001751	SMARCA1	100	97.570	Canis_lupus_dingo
ENSMMUG00000008818	SMARCA1	99	98.220	ENSCHIG00000009837	SMARCA1	100	96.459	Capra_hircus
ENSMMUG00000008818	SMARCA1	99	98.429	ENSTSYG00000004240	SMARCA1	99	98.281	Carlito_syrichta
ENSMMUG00000008818	SMARCA1	99	97.086	ENSCPOG00000013601	SMARCA1	99	95.989	Cavia_porcellus
ENSMMUG00000008818	SMARCA1	100	96.729	ENSCCAG00000030817	SMARCA1	100	96.729	Cebus_capucinus
ENSMMUG00000008818	SMARCA1	100	100.000	ENSCATG00000015921	SMARCA1	100	100.000	Cercocebus_atys
ENSMMUG00000008818	SMARCA1	99	97.487	ENSCLAG00000002171	SMARCA1	100	95.981	Chinchilla_lanigera
ENSMMUG00000008818	SMARCA1	99	99.903	ENSCSAG00000008460	SMARCA1	100	98.785	Chlorocebus_sabaeus
ENSMMUG00000008818	SMARCA1	99	93.187	ENSCPBG00000001146	SMARCA1	94	91.691	Chrysemys_picta_bellii
ENSMMUG00000008818	SMARCA1	98	74.921	ENSCING00000004110	swi/snf	97	73.104	Ciona_intestinalis
ENSMMUG00000008818	SMARCA1	98	74.211	ENSCSAVG00000004620	-	100	74.165	Ciona_savignyi
ENSMMUG00000008818	SMARCA1	100	99.907	ENSCANG00000007183	SMARCA1	100	99.907	Colobus_angolensis_palliatus
ENSMMUG00000008818	SMARCA1	99	96.649	ENSCGRG00001010776	Smarca1	98	95.243	Cricetulus_griseus_chok1gshd
ENSMMUG00000008818	SMARCA1	99	95.549	ENSCGRG00000015301	Smarca1	98	96.356	Cricetulus_griseus_crigri
ENSMMUG00000008818	SMARCA1	97	84.615	ENSCSEG00000000328	smarca5	95	82.118	Cynoglossus_semilaevis
ENSMMUG00000008818	SMARCA1	97	84.345	ENSCVAG00000008668	smarca5	97	84.848	Cyprinodon_variegatus
ENSMMUG00000008818	SMARCA1	97	84.813	ENSDARG00000052348	smarca5	93	83.851	Danio_rerio
ENSMMUG00000008818	SMARCA1	99	86.578	ENSDARG00000012776	smarca1	96	86.103	Danio_rerio
ENSMMUG00000008818	SMARCA1	99	96.757	ENSDNOG00000004315	SMARCA1	100	96.139	Dasypus_novemcinctus
ENSMMUG00000008818	SMARCA1	100	96.449	ENSDORG00000009270	Smarca1	100	96.449	Dipodomys_ordii
ENSMMUG00000008818	SMARCA1	96	74.866	FBgn0011604	Iswi	98	71.457	Drosophila_melanogaster
ENSMMUG00000008818	SMARCA1	85	93.750	ENSETEG00000017426	SMARCA1	86	93.750	Echinops_telfairi
ENSMMUG00000008818	SMARCA1	97	82.062	ENSEBUG00000001239	smarca5	95	81.790	Eptatretus_burgeri
ENSMMUG00000008818	SMARCA1	99	93.481	ENSEASG00005008218	SMARCA1	99	93.936	Equus_asinus_asinus
ENSMMUG00000008818	SMARCA1	99	98.325	ENSECAG00000012106	SMARCA1	100	96.925	Equus_caballus
ENSMMUG00000008818	SMARCA1	83	97.342	ENSEEUG00000014927	SMARCA1	83	97.682	Erinaceus_europaeus
ENSMMUG00000008818	SMARCA1	97	88.417	ENSELUG00000010515	smarca1	98	85.747	Esox_lucius
ENSMMUG00000008818	SMARCA1	100	98.598	ENSFCAG00000018496	SMARCA1	100	98.598	Felis_catus
ENSMMUG00000008818	SMARCA1	95	93.414	ENSFALG00000000209	SMARCA1	98	93.538	Ficedula_albicollis
ENSMMUG00000008818	SMARCA1	99	96.197	ENSFDAG00000009818	SMARCA1	97	97.982	Fukomys_damarensis
ENSMMUG00000008818	SMARCA1	97	84.665	ENSFHEG00000007687	smarca5	91	85.497	Fundulus_heteroclitus
ENSMMUG00000008818	SMARCA1	97	93.497	ENSGALG00000008431	SMARCA1	97	92.835	Gallus_gallus
ENSMMUG00000008818	SMARCA1	97	84.665	ENSGAFG00000017731	smarca5	93	83.851	Gambusia_affinis
ENSMMUG00000008818	SMARCA1	98	93.658	ENSGAGG00000023575	SMARCA1	100	92.378	Gopherus_agassizii
ENSMMUG00000008818	SMARCA1	76	96.000	ENSGGOG00000012841	-	98	96.000	Gorilla_gorilla
ENSMMUG00000008818	SMARCA1	99	97.101	ENSHGLG00000003080	SMARCA1	99	97.039	Heterocephalus_glaber_female
ENSMMUG00000008818	SMARCA1	99	96.462	ENSHGLG00100001102	SMARCA1	100	95.656	Heterocephalus_glaber_male
ENSMMUG00000008818	SMARCA1	97	84.452	ENSHCOG00000005458	smarca5	93	83.851	Hippocampus_comes
ENSMMUG00000008818	SMARCA1	98	84.132	ENSIPUG00000005229	SMARCA5	95	83.784	Ictalurus_punctatus
ENSMMUG00000008818	SMARCA1	99	87.539	ENSIPUG00000016905	Smarca1	98	87.812	Ictalurus_punctatus
ENSMMUG00000008818	SMARCA1	99	98.947	ENSSTOG00000014524	SMARCA1	100	97.333	Ictidomys_tridecemlineatus
ENSMMUG00000008818	SMARCA1	100	96.545	ENSJJAG00000002593	Smarca1	100	96.545	Jaculus_jaculus
ENSMMUG00000008818	SMARCA1	97	84.771	ENSKMAG00000003777	smarca5	93	84.058	Kryptolebias_marmoratus
ENSMMUG00000008818	SMARCA1	95	84.331	ENSLBEG00000013295	SMARCA1	100	84.829	Labrus_bergylta
ENSMMUG00000008818	SMARCA1	97	84.239	ENSLBEG00000018112	smarca5	93	83.747	Labrus_bergylta
ENSMMUG00000008818	SMARCA1	99	91.377	ENSLACG00000016697	SMARCA1	98	89.120	Latimeria_chalumnae
ENSMMUG00000008818	SMARCA1	97	90.618	ENSLOCG00000014591	smarca1	95	90.010	Lepisosteus_oculatus
ENSMMUG00000008818	SMARCA1	99	96.670	ENSLAFG00000000896	SMARCA1	100	96.266	Loxodonta_africana
ENSMMUG00000008818	SMARCA1	100	100.000	ENSMFAG00000002117	SMARCA1	100	100.000	Macaca_fascicularis
ENSMMUG00000008818	SMARCA1	100	100.000	ENSMNEG00000041768	SMARCA1	100	100.000	Macaca_nemestrina
ENSMMUG00000008818	SMARCA1	100	99.907	ENSMLEG00000043198	SMARCA1	100	99.907	Mandrillus_leucophaeus
ENSMMUG00000008818	SMARCA1	97	84.984	ENSMAMG00000014294	smarca5	96	81.602	Mastacembelus_armatus
ENSMMUG00000008818	SMARCA1	97	84.984	ENSMZEG00005009369	smarca5	93	84.161	Maylandia_zebra
ENSMMUG00000008818	SMARCA1	97	92.316	ENSMGAG00000007042	SMARCA1	99	91.494	Meleagris_gallopavo
ENSMMUG00000008818	SMARCA1	100	95.893	ENSMAUG00000008133	Smarca1	100	95.893	Mesocricetus_auratus
ENSMMUG00000008818	SMARCA1	100	98.224	ENSMICG00000015768	SMARCA1	100	98.224	Microcebus_murinus
ENSMMUG00000008818	SMARCA1	99	96.354	ENSMOCG00000009464	Smarca1	100	95.066	Microtus_ochrogaster
ENSMMUG00000008818	SMARCA1	97	82.854	ENSMMOG00000005547	smarca5	97	82.316	Mola_mola
ENSMMUG00000008818	SMARCA1	99	92.542	ENSMODG00000013187	-	99	88.517	Monodelphis_domestica
ENSMMUG00000008818	SMARCA1	98	84.255	ENSMALG00000002081	smarca5	97	82.497	Monopterus_albus
ENSMMUG00000008818	SMARCA1	100	95.893	MGP_CAROLIEiJ_G0033034	Smarca1	100	95.893	Mus_caroli
ENSMMUG00000008818	SMARCA1	100	95.893	ENSMUSG00000031099	Smarca1	100	95.893	Mus_musculus
ENSMMUG00000008818	SMARCA1	100	95.989	MGP_PahariEiJ_G0031579	Smarca1	100	95.989	Mus_pahari
ENSMMUG00000008818	SMARCA1	100	95.989	MGP_SPRETEiJ_G0034192	Smarca1	100	95.989	Mus_spretus
ENSMMUG00000008818	SMARCA1	100	98.224	ENSMPUG00000017423	SMARCA1	95	98.224	Mustela_putorius_furo
ENSMMUG00000008818	SMARCA1	100	94.590	ENSMLUG00000029614	SMARCA1	100	94.030	Myotis_lucifugus
ENSMMUG00000008818	SMARCA1	100	96.657	ENSNGAG00000006492	Smarca1	100	96.657	Nannospalax_galili
ENSMMUG00000008818	SMARCA1	97	85.091	ENSNBRG00000004463	smarca5	97	84.265	Neolamprologus_brichardi
ENSMMUG00000008818	SMARCA1	100	99.159	ENSNLEG00000015179	SMARCA1	100	99.159	Nomascus_leucogenys
ENSMMUG00000008818	SMARCA1	95	82.416	ENSMEUG00000008819	SMARCA1	99	82.019	Notamacropus_eugenii
ENSMMUG00000008818	SMARCA1	100	95.446	ENSODEG00000012163	SMARCA1	99	96.466	Octodon_degus
ENSMMUG00000008818	SMARCA1	97	85.091	ENSONIG00000009993	smarca5	93	84.265	Oreochromis_niloticus
ENSMMUG00000008818	SMARCA1	98	94.087	ENSOANG00000002862	SMARCA1	100	92.683	Ornithorhynchus_anatinus
ENSMMUG00000008818	SMARCA1	99	97.487	ENSOCUG00000001047	SMARCA1	100	95.607	Oryctolagus_cuniculus
ENSMMUG00000008818	SMARCA1	97	84.558	ENSORLG00000021998	smarca5	93	83.851	Oryzias_latipes
ENSMMUG00000008818	SMARCA1	97	84.665	ENSORLG00020017679	smarca5	93	83.954	Oryzias_latipes_hni
ENSMMUG00000008818	SMARCA1	97	84.558	ENSORLG00015017210	smarca5	93	83.747	Oryzias_latipes_hsok
ENSMMUG00000008818	SMARCA1	97	84.558	ENSOMEG00000000086	smarca5	93	83.747	Oryzias_melastigma
ENSMMUG00000008818	SMARCA1	100	97.343	ENSOGAG00000004399	SMARCA1	99	98.376	Otolemur_garnettii
ENSMMUG00000008818	SMARCA1	99	98.220	ENSOARG00000014638	SMARCA1	100	97.681	Ovis_aries
ENSMMUG00000008818	SMARCA1	100	100.000	ENSPPAG00000034647	SMARCA1	100	100.000	Pan_paniscus
ENSMMUG00000008818	SMARCA1	100	98.598	ENSPPRG00000008929	SMARCA1	100	98.598	Panthera_pardus
ENSMMUG00000008818	SMARCA1	99	96.193	ENSPTIG00000000915	SMARCA1	98	97.151	Panthera_tigris_altaica
ENSMMUG00000008818	SMARCA1	100	100.000	ENSPTRG00000049876	SMARCA1	100	100.000	Pan_troglodytes
ENSMMUG00000008818	SMARCA1	100	100.000	ENSPANG00000003871	SMARCA1	100	100.000	Papio_anubis
ENSMMUG00000008818	SMARCA1	96	88.197	ENSPKIG00000013411	smarca1	98	86.880	Paramormyrops_kingsleyae
ENSMMUG00000008818	SMARCA1	98	93.446	ENSPSIG00000010101	SMARCA1	100	92.073	Pelodiscus_sinensis
ENSMMUG00000008818	SMARCA1	100	96.562	ENSPEMG00000017503	Smarca1	100	96.562	Peromyscus_maniculatus_bairdii
ENSMMUG00000008818	SMARCA1	99	93.067	ENSPCIG00000015460	SMARCA1	97	92.237	Phascolarctos_cinereus
ENSMMUG00000008818	SMARCA1	97	84.771	ENSPFOG00000007649	smarca5	93	83.851	Poecilia_formosa
ENSMMUG00000008818	SMARCA1	97	84.771	ENSPLAG00000003363	smarca5	93	83.851	Poecilia_latipinna
ENSMMUG00000008818	SMARCA1	97	84.665	ENSPMEG00000019849	smarca5	94	83.436	Poecilia_mexicana
ENSMMUG00000008818	SMARCA1	97	84.665	ENSPREG00000023250	smarca5	94	83.436	Poecilia_reticulata
ENSMMUG00000008818	SMARCA1	99	97.198	ENSPPYG00000020703	SMARCA1	100	96.168	Pongo_abelii
ENSMMUG00000008818	SMARCA1	84	88.273	ENSPCOG00000020722	SMARCA1	94	93.796	Propithecus_coquereli
ENSMMUG00000008818	SMARCA1	94	95.791	ENSPVAG00000003805	SMARCA1	94	97.297	Pteropus_vampyrus
ENSMMUG00000008818	SMARCA1	61	84.488	ENSPNYG00000012299	smarca5	92	82.933	Pundamilia_nyererei
ENSMMUG00000008818	SMARCA1	99	96.963	ENSRNOG00000003762	Smarca1	100	95.327	Rattus_norvegicus
ENSMMUG00000008818	SMARCA1	100	99.907	ENSRROG00000034167	SMARCA1	100	99.907	Rhinopithecus_roxellana
ENSMMUG00000008818	SMARCA1	99	99.162	ENSSBOG00000020641	SMARCA1	100	98.589	Saimiri_boliviensis_boliviensis
ENSMMUG00000008818	SMARCA1	96	87.406	ENSSHAG00000013518	SMARCA1	99	85.685	Sarcophilus_harrisii
ENSMMUG00000008818	SMARCA1	98	84.558	ENSSFOG00015016794	smarca5	98	85.005	Scleropages_formosus
ENSMMUG00000008818	SMARCA1	97	89.479	ENSSFOG00015009043	smarca1	96	88.730	Scleropages_formosus
ENSMMUG00000008818	SMARCA1	97	83.919	ENSSMAG00000004801	smarca5	93	83.489	Scophthalmus_maximus
ENSMMUG00000008818	SMARCA1	97	84.452	ENSSDUG00000020690	smarca5	94	83.644	Seriola_dumerili
ENSMMUG00000008818	SMARCA1	97	84.452	ENSSLDG00000025190	smarca5	94	83.644	Seriola_lalandi_dorsalis
ENSMMUG00000008818	SMARCA1	85	97.163	ENSSARG00000000842	SMARCA1	92	90.275	Sorex_araneus
ENSMMUG00000008818	SMARCA1	99	91.675	ENSSPUG00000000590	SMARCA1	95	91.658	Sphenodon_punctatus
ENSMMUG00000008818	SMARCA1	97	84.936	ENSSPAG00000002894	smarca5	97	82.937	Stegastes_partitus
ENSMMUG00000008818	SMARCA1	99	98.013	ENSSSCG00000012649	SMARCA1	100	97.690	Sus_scrofa
ENSMMUG00000008818	SMARCA1	97	93.177	ENSTGUG00000003899	-	100	91.650	Taeniopygia_guttata
ENSMMUG00000008818	SMARCA1	97	84.722	ENSTRUG00000014094	smarca5	95	81.737	Takifugu_rubripes
ENSMMUG00000008818	SMARCA1	97	83.547	ENSTNIG00000017717	smarca5	94	80.639	Tetraodon_nigroviridis
ENSMMUG00000008818	SMARCA1	93	95.604	ENSTBEG00000014973	SMARCA1	99	91.304	Tupaia_belangeri
ENSMMUG00000008818	SMARCA1	99	93.320	ENSTTRG00000006168	SMARCA1	99	95.320	Tursiops_truncatus
ENSMMUG00000008818	SMARCA1	99	98.115	ENSUAMG00000020201	SMARCA1	100	97.009	Ursus_americanus
ENSMMUG00000008818	SMARCA1	99	93.796	ENSUMAG00000004073	SMARCA1	97	98.783	Ursus_maritimus
ENSMMUG00000008818	SMARCA1	80	98.789	ENSVPAG00000010492	-	85	99.675	Vicugna_pacos
ENSMMUG00000008818	SMARCA1	99	98.429	ENSVVUG00000008878	SMARCA1	100	98.956	Vulpes_vulpes
ENSMMUG00000008818	SMARCA1	97	90.426	ENSXETG00000001526	smarca1	99	88.370	Xenopus_tropicalis
ENSMMUG00000008818	SMARCA1	97	84.558	ENSXCOG00000011170	smarca5	96	83.747	Xiphophorus_couchianus
ENSMMUG00000008818	SMARCA1	97	84.558	ENSXMAG00000009678	smarca5	98	84.641	Xiphophorus_maculatus