EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000008839 (Gene tree)
Gene ID: 715233
Gene Symbol: DDX39B
Alias: BAT1
Full Name: DExD-box helicase 39B
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 10126 bases
Position: chr4:32389312-32399437
Accession: 715233
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000050210	ResIII	PF04851.15	1.3e-07	1	1
ENSMMUP00000034109	ResIII	PF04851.15	2e-07	1	1
ENSMMUP00000011584	ResIII	PF04851.15	2.3e-07	1	1
ENSMMUP00000050210	DEAD	PF00270.29	6.9e-39	1	1
ENSMMUP00000034109	DEAD	PF00270.29	1e-38	1	1
ENSMMUP00000011584	DEAD	PF00270.29	3e-37	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000041076	-	1423	XM_015135918	ENSMMUP00000034109	428 (aa)	XP_014991404	Q5TM17
ENSMMUT00000067089	-	960	-	ENSMMUP00000050210	319 (aa)	-	A0A1D5QQ83
ENSMMUT00000012351	-	1245	-	ENSMMUP00000011584	414 (aa)	-	F7EWD0

Gene Model

Click here to download ENSMMUG00000008839's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03013	RNA transport	KEGG
mcc03015	mRNA surveillance pathway	KEGG
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000008839's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000008839	DDX39B	86	35.405	ENSMMUG00000007050	-	91	35.405
ENSMMUG00000008839	DDX39B	64	32.576	ENSMMUG00000019847	-	83	32.576
ENSMMUG00000008839	DDX39B	68	30.100	ENSMMUG00000038680	-	90	30.100
ENSMMUG00000008839	DDX39B	85	38.082	ENSMMUG00000009590	EIF4A3	88	38.082
ENSMMUG00000008839	DDX39B	79	30.435	ENSMMUG00000016911	DDX41	54	30.435
ENSMMUG00000008839	DDX39B	92	36.802	ENSMMUG00000013499	-	95	36.802
ENSMMUG00000008839	DDX39B	65	30.698	ENSMMUG00000002645	DDX56	62	42.188
ENSMMUG00000008839	DDX39B	100	89.953	ENSMMUG00000005723	DDX39A	100	89.953
ENSMMUG00000008839	DDX39B	64	37.561	ENSMMUG00000007545	-	90	36.916
ENSMMUG00000008839	DDX39B	81	35.159	ENSMMUG00000017993	DDX47	75	35.159
ENSMMUG00000008839	DDX39B	77	30.211	ENSMMUG00000009463	DDX5	66	30.029
ENSMMUG00000008839	DDX39B	87	30.343	ENSMMUG00000004268	DDX59	60	30.343
ENSMMUG00000008839	DDX39B	53	31.285	ENSMMUG00000013178	DDX55	87	31.111
ENSMMUG00000008839	DDX39B	82	30.663	ENSMMUG00000017569	DDX3X	58	30.052
ENSMMUG00000008839	DDX39B	84	30.081	ENSMMUG00000007624	DDX25	82	30.303
ENSMMUG00000008839	DDX39B	91	32.832	ENSMMUG00000020316	-	98	32.000
ENSMMUG00000008839	DDX39B	87	32.021	ENSMMUG00000023293	DDX49	78	32.021
ENSMMUG00000008839	DDX39B	87	30.184	ENSMMUG00000016762	DDX42	50	30.685
ENSMMUG00000008839	DDX39B	86	38.919	ENSMMUG00000003702	EIF4A2	94	36.242
ENSMMUG00000008839	DDX39B	99	34.033	ENSMMUG00000018651	DDX6	83	32.763
ENSMMUG00000008839	DDX39B	93	30.047	ENSMMUG00000043966	DDX3Y	68	30.047

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000008839	DDX39B	100	100.000	ENSG00000198563	DDX39B	100	100.000	Homo_sapiens
ENSMMUG00000008839	DDX39B	100	99.766	ENSAMEG00000009508	DDX39B	99	99.766	Ailuropoda_melanoleuca
ENSMMUG00000008839	DDX39B	99	93.677	ENSACIG00000004534	ddx39b	98	93.677	Amphilophus_citrinellus
ENSMMUG00000008839	DDX39B	100	92.824	ENSATEG00000012366	ddx39b	100	92.824	Anabas_testudineus
ENSMMUG00000008839	DDX39B	100	97.203	ENSACAG00000012240	DDX39B	100	97.203	Anolis_carolinensis
ENSMMUG00000008839	DDX39B	100	100.000	ENSANAG00000030372	DDX39B	100	100.000	Aotus_nancymaae
ENSMMUG00000008839	DDX39B	99	90.783	ENSACLG00000018759	ddx39b	99	90.783	Astatotilapia_calliptera
ENSMMUG00000008839	DDX39B	100	92.431	ENSAMXG00000017837	ddx39b	100	92.431	Astyanax_mexicanus
ENSMMUG00000008839	DDX39B	100	99.766	ENSBTAG00000014490	DDX39B	100	99.766	Bos_taurus
ENSMMUG00000008839	DDX39B	100	100.000	ENSCJAG00000003152	DDX39B	100	100.000	Callithrix_jacchus
ENSMMUG00000008839	DDX39B	100	99.533	ENSCAFG00000000509	DDX39B	100	100.000	Canis_familiaris
ENSMMUG00000008839	DDX39B	100	99.533	ENSCAFG00020020530	DDX39B	100	99.533	Canis_lupus_dingo
ENSMMUG00000008839	DDX39B	100	99.766	ENSCHIG00000004579	DDX39B	100	99.766	Capra_hircus
ENSMMUG00000008839	DDX39B	100	100.000	ENSTSYG00000010226	-	100	100.000	Carlito_syrichta
ENSMMUG00000008839	DDX39B	100	85.280	ENSTSYG00000029741	-	100	82.725	Carlito_syrichta
ENSMMUG00000008839	DDX39B	100	99.766	ENSCAPG00000010066	DDX39B	100	99.766	Cavia_aperea
ENSMMUG00000008839	DDX39B	100	99.766	ENSCPOG00000002335	DDX39B	100	99.766	Cavia_porcellus
ENSMMUG00000008839	DDX39B	100	100.000	ENSCCAG00000027897	DDX39B	100	100.000	Cebus_capucinus
ENSMMUG00000008839	DDX39B	99	90.353	ENSCATG00000043709	DDX39B	99	90.353	Cercocebus_atys
ENSMMUG00000008839	DDX39B	100	99.766	ENSCLAG00000014555	DDX39B	100	99.766	Chinchilla_lanigera
ENSMMUG00000008839	DDX39B	99	99.765	ENSCSAG00000008517	DDX39B	100	99.765	Chlorocebus_sabaeus
ENSMMUG00000008839	DDX39B	66	100.000	ENSCPBG00000014671	-	100	100.000	Chrysemys_picta_bellii
ENSMMUG00000008839	DDX39B	100	100.000	ENSCANG00000041217	DDX39B	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000008839	DDX39B	86	84.314	ENSCGRG00001021916	-	89	84.358	Cricetulus_griseus_chok1gshd
ENSMMUG00000008839	DDX39B	83	98.872	ENSCGRG00001017315	-	95	99.029	Cricetulus_griseus_chok1gshd
ENSMMUG00000008839	DDX39B	97	91.277	ENSCGRG00000012479	-	100	91.589	Cricetulus_griseus_crigri
ENSMMUG00000008839	DDX39B	64	98.537	ENSCGRG00000000078	-	90	98.537	Cricetulus_griseus_crigri
ENSMMUG00000008839	DDX39B	100	92.184	ENSDARG00000036069	ddx39b	100	92.414	Danio_rerio
ENSMMUG00000008839	DDX39B	100	100.000	ENSDNOG00000010215	DDX39B	100	100.000	Dasypus_novemcinctus
ENSMMUG00000008839	DDX39B	87	99.733	ENSDORG00000004985	Ddx39b	100	99.733	Dipodomys_ordii
ENSMMUG00000008839	DDX39B	77	97.959	ENSETEG00000009649	DDX39B	87	86.898	Echinops_telfairi
ENSMMUG00000008839	DDX39B	100	100.000	ENSEASG00005017156	DDX39B	100	100.000	Equus_asinus_asinus
ENSMMUG00000008839	DDX39B	100	100.000	ENSECAG00000007750	DDX39B	100	100.000	Equus_caballus
ENSMMUG00000008839	DDX39B	100	92.343	ENSELUG00000017904	ddx39b	100	92.343	Esox_lucius
ENSMMUG00000008839	DDX39B	100	99.766	ENSFCAG00000004497	DDX39B	100	99.766	Felis_catus
ENSMMUG00000008839	DDX39B	100	99.766	ENSFDAG00000011074	DDX39B	100	99.766	Fukomys_damarensis
ENSMMUG00000008839	DDX39B	76	99.684	ENSGAGG00000001300	-	80	99.684	Gopherus_agassizii
ENSMMUG00000008839	DDX39B	100	100.000	ENSGGOG00000005989	DDX39B	100	100.000	Gorilla_gorilla
ENSMMUG00000008839	DDX39B	64	88.038	ENSHBUG00000022054	-	77	88.038	Haplochromis_burtoni
ENSMMUG00000008839	DDX39B	100	99.299	ENSHGLG00000019248	DDX39B	100	99.299	Heterocephalus_glaber_female
ENSMMUG00000008839	DDX39B	100	99.299	ENSHGLG00100011850	DDX39B	100	99.299	Heterocephalus_glaber_male
ENSMMUG00000008839	DDX39B	100	91.284	ENSIPUG00000015733	DDX39B	94	91.743	Ictalurus_punctatus
ENSMMUG00000008839	DDX39B	100	99.533	ENSSTOG00000012838	DDX39B	100	99.533	Ictidomys_tridecemlineatus
ENSMMUG00000008839	DDX39B	100	99.299	ENSJJAG00000005660	-	100	99.299	Jaculus_jaculus
ENSMMUG00000008839	DDX39B	78	75.403	ENSLBEG00000017177	-	90	73.462	Labrus_bergylta
ENSMMUG00000008839	DDX39B	99	78.251	ENSLBEG00000012254	ddx39b	99	78.220	Labrus_bergylta
ENSMMUG00000008839	DDX39B	100	89.862	ENSLACG00000002110	DDX39B	100	89.862	Latimeria_chalumnae
ENSMMUG00000008839	DDX39B	100	99.766	ENSLAFG00000014202	DDX39B	100	99.766	Loxodonta_africana
ENSMMUG00000008839	DDX39B	100	100.000	ENSMFAG00000034233	DDX39B	100	100.000	Macaca_fascicularis
ENSMMUG00000008839	DDX39B	100	100.000	ENSMNEG00000041059	DDX39B	100	100.000	Macaca_nemestrina
ENSMMUG00000008839	DDX39B	100	100.000	ENSMLEG00000043791	DDX39B	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000008839	DDX39B	99	90.783	ENSMZEG00005017654	ddx39b	99	90.783	Maylandia_zebra
ENSMMUG00000008839	DDX39B	100	99.299	ENSMAUG00000008059	Ddx39b	100	99.299	Mesocricetus_auratus
ENSMMUG00000008839	DDX39B	100	100.000	ENSMICG00000017349	DDX39B	100	100.000	Microcebus_murinus
ENSMMUG00000008839	DDX39B	100	99.533	ENSMOCG00000011169	Ddx39b	100	99.533	Microtus_ochrogaster
ENSMMUG00000008839	DDX39B	88	99.734	ENSMODG00000015791	DDX39B	88	99.734	Monodelphis_domestica
ENSMMUG00000008839	DDX39B	56	97.765	MGP_CAROLIEiJ_G0021519	-	97	97.765	Mus_caroli
ENSMMUG00000008839	DDX39B	100	99.533	ENSMUSG00000019432	Ddx39b	100	100.000	Mus_musculus
ENSMMUG00000008839	DDX39B	100	99.533	MGP_PahariEiJ_G0020513	Ddx39b	100	100.000	Mus_pahari
ENSMMUG00000008839	DDX39B	100	99.533	MGP_SPRETEiJ_G0022424	Ddx39b	100	99.533	Mus_spretus
ENSMMUG00000008839	DDX39B	100	99.766	ENSMPUG00000011407	DDX39B	100	99.766	Mustela_putorius_furo
ENSMMUG00000008839	DDX39B	75	100.000	ENSMLUG00000001681	DDX39B	100	100.000	Myotis_lucifugus
ENSMMUG00000008839	DDX39B	100	100.000	ENSNGAG00000022948	Ddx39b	100	100.000	Nannospalax_galili
ENSMMUG00000008839	DDX39B	100	75.467	ENSNLEG00000006094	DDX39B	81	99.649	Nomascus_leucogenys
ENSMMUG00000008839	DDX39B	86	100.000	ENSMEUG00000008264	DDX39B	86	100.000	Notamacropus_eugenii
ENSMMUG00000008839	DDX39B	100	99.766	ENSOPRG00000011923	DDX39B	100	99.766	Ochotona_princeps
ENSMMUG00000008839	DDX39B	100	99.533	ENSODEG00000018083	DDX39B	100	99.533	Octodon_degus
ENSMMUG00000008839	DDX39B	100	91.898	ENSONIG00000004740	ddx39b	100	91.898	Oreochromis_niloticus
ENSMMUG00000008839	DDX39B	74	99.156	ENSOANG00000008361	DDX39B	95	99.156	Ornithorhynchus_anatinus
ENSMMUG00000008839	DDX39B	100	96.163	ENSOCUG00000024126	DDX39B	100	96.163	Oryctolagus_cuniculus
ENSMMUG00000008839	DDX39B	86	91.421	ENSOGAG00000009067	-	100	98.457	Otolemur_garnettii
ENSMMUG00000008839	DDX39B	100	98.601	ENSOGAG00000028850	-	100	98.601	Otolemur_garnettii
ENSMMUG00000008839	DDX39B	100	99.766	ENSOARG00000008787	DDX39B	98	99.766	Ovis_aries
ENSMMUG00000008839	DDX39B	100	100.000	ENSPPAG00000043072	DDX39B	100	100.000	Pan_paniscus
ENSMMUG00000008839	DDX39B	100	99.766	ENSPPRG00000001913	DDX39B	100	99.766	Panthera_pardus
ENSMMUG00000008839	DDX39B	100	98.832	ENSPTIG00000017669	DDX39B	100	98.832	Panthera_tigris_altaica
ENSMMUG00000008839	DDX39B	100	100.000	ENSPTRG00000032509	DDX39B	100	100.000	Pan_troglodytes
ENSMMUG00000008839	DDX39B	100	100.000	ENSPANG00000018609	DDX39B	100	100.000	Papio_anubis
ENSMMUG00000008839	DDX39B	100	90.847	ENSPKIG00000011324	ddx39b	100	91.304	Paramormyrops_kingsleyae
ENSMMUG00000008839	DDX39B	100	99.299	ENSPEMG00000016905	Ddx39b	100	99.299	Peromyscus_maniculatus_bairdii
ENSMMUG00000008839	DDX39B	100	100.000	ENSPCIG00000017572	DDX39B	100	100.000	Phascolarctos_cinereus
ENSMMUG00000008839	DDX39B	100	100.000	ENSPPYG00000016433	DDX39B	100	100.000	Pongo_abelii
ENSMMUG00000008839	DDX39B	69	99.648	ENSPCAG00000003484	DDX39B	100	99.648	Procavia_capensis
ENSMMUG00000008839	DDX39B	100	100.000	ENSPCOG00000018656	DDX39B	100	100.000	Propithecus_coquereli
ENSMMUG00000008839	DDX39B	100	99.533	ENSPVAG00000004653	DDX39B	100	99.533	Pteropus_vampyrus
ENSMMUG00000008839	DDX39B	99	82.904	ENSPNYG00000010382	ddx39b	98	82.904	Pundamilia_nyererei
ENSMMUG00000008839	DDX39B	100	92.202	ENSPNAG00000026926	ddx39b	100	92.202	Pygocentrus_nattereri
ENSMMUG00000008839	DDX39B	100	99.533	ENSRNOG00000000841	Ddx39b	100	99.533	Rattus_norvegicus
ENSMMUG00000008839	DDX39B	99	99.051	ENSRBIG00000031309	DDX39B	99	99.051	Rhinopithecus_bieti
ENSMMUG00000008839	DDX39B	100	100.000	ENSRROG00000039517	DDX39B	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000008839	DDX39B	100	89.720	ENSSBOG00000035513	-	97	94.805	Saimiri_boliviensis_boliviensis
ENSMMUG00000008839	DDX39B	100	100.000	ENSSHAG00000003209	DDX39B	100	100.000	Sarcophilus_harrisii
ENSMMUG00000008839	DDX39B	100	91.076	ENSSFOG00015016107	ddx39b	100	91.762	Scleropages_formosus
ENSMMUG00000008839	DDX39B	100	93.287	ENSSDUG00000011557	ddx39b	100	93.519	Seriola_dumerili
ENSMMUG00000008839	DDX39B	100	93.056	ENSSLDG00000015763	ddx39b	100	93.287	Seriola_lalandi_dorsalis
ENSMMUG00000008839	DDX39B	77	99.184	ENSSARG00000005245	DDX39B	100	87.701	Sorex_araneus
ENSMMUG00000008839	DDX39B	100	97.897	ENSSPUG00000012805	DDX39B	100	97.897	Sphenodon_punctatus
ENSMMUG00000008839	DDX39B	100	100.000	ENSSSCG00000001400	DDX39B	100	100.000	Sus_scrofa
ENSMMUG00000008839	DDX39B	100	76.869	ENSTBEG00000003721	DDX39B	100	76.869	Tupaia_belangeri
ENSMMUG00000008839	DDX39B	100	91.455	ENSTTRG00000014074	DDX39B	100	91.455	Tursiops_truncatus
ENSMMUG00000008839	DDX39B	100	86.977	ENSUAMG00000027335	DDX39B	100	86.977	Ursus_americanus
ENSMMUG00000008839	DDX39B	100	90.888	ENSUMAG00000015124	DDX39B	100	90.888	Ursus_maritimus
ENSMMUG00000008839	DDX39B	61	100.000	ENSVPAG00000009167	-	74	100.000	Vicugna_pacos
ENSMMUG00000008839	DDX39B	100	99.533	ENSVVUG00000019518	DDX39B	99	99.533	Vulpes_vulpes
ENSMMUG00000008839	DDX39B	100	83.953	ENSXETG00000002498	ddx39b	99	83.953	Xenopus_tropicalis