EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000009050 (Gene tree)
Gene ID: 709798
Gene Symbol: MBD1
Alias: CXXC3|PCM1
Full Name: methyl-CpG binding domain protein 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 14188 bases
Position: chr18:39291319-39305506
Accession: 709798
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000041221	MBD	PF01429.19	4.1e-16	1	1
ENSMMUP00000051487	MBD	PF01429.19	4.1e-16	1	1
ENSMMUP00000011863	MBD	PF01429.19	4.3e-16	1	1
ENSMMUP00000011864	MBD	PF01429.19	4.3e-16	1	1
ENSMMUP00000011866	MBD	PF01429.19	4.4e-16	1	1
ENSMMUP00000011867	MBD	PF01429.19	4.6e-16	1	1
ENSMMUP00000011865	MBD	PF01429.19	4.6e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000012654	MBD1-204	1758	XM_015121939	ENSMMUP00000011867	585 (aa)	XP_014977425	F7FBM5
ENSMMUT00000012653	MBD1-201	1704	XM_015121952	ENSMMUP00000011866	567 (aa)	XP_014977438	F7FBN3
ENSMMUT00000012652	MBD1-203	1815	-	ENSMMUP00000011865	604 (aa)	-	F7FBN7
ENSMMUT00000012651	MBD1-206	1653	-	ENSMMUP00000011864	550 (aa)	-	F7FBP1
ENSMMUT00000012650	MBD1-205	1719	XM_015121943	ENSMMUP00000011863	572 (aa)	XP_014977429	F7FBP7
ENSMMUT00000069201	MBD1-202	5001	XM_001098362	ENSMMUP00000051487	630 (aa)	XP_001098362	A0A1D5QTV7
ENSMMUT00000048182	MBD1-207	1608	-	ENSMMUP00000041221	535 (aa)	-	F7CL60

Gene Model

Click here to download ENSMMUG00000009050's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000009050's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000009050	MBD1	100	99.365	ENSG00000141644	MBD1	100	99.365	Homo_sapiens
ENSMMUG00000009050	MBD1	100	87.500	ENSAMEG00000000238	MBD1	96	87.975	Ailuropoda_melanoleuca
ENSMMUG00000009050	MBD1	69	45.297	ENSACAG00000006091	-	100	45.278	Anolis_carolinensis
ENSMMUG00000009050	MBD1	100	96.190	ENSANAG00000036253	MBD1	100	96.190	Aotus_nancymaae
ENSMMUG00000009050	MBD1	100	86.529	ENSBTAG00000003801	MBD1	100	87.322	Bos_taurus
ENSMMUG00000009050	MBD1	100	94.860	ENSCJAG00000004959	MBD1	100	95.247	Callithrix_jacchus
ENSMMUG00000009050	MBD1	100	91.667	ENSCAFG00000018928	MBD1	96	87.322	Canis_familiaris
ENSMMUG00000009050	MBD1	99	85.875	ENSCAFG00020024272	MBD1	97	86.677	Canis_lupus_dingo
ENSMMUG00000009050	MBD1	100	86.529	ENSCHIG00000021134	MBD1	100	87.322	Capra_hircus
ENSMMUG00000009050	MBD1	100	90.794	ENSTSYG00000000509	MBD1	100	90.794	Carlito_syrichta
ENSMMUG00000009050	MBD1	95	64.955	ENSCAPG00000015782	MBD1	98	64.738	Cavia_aperea
ENSMMUG00000009050	MBD1	96	73.435	ENSCPOG00000001671	MBD1	99	73.266	Cavia_porcellus
ENSMMUG00000009050	MBD1	99	91.788	ENSCCAG00000034600	MBD1	99	93.053	Cebus_capucinus
ENSMMUG00000009050	MBD1	100	99.524	ENSCATG00000029959	MBD1	100	99.524	Cercocebus_atys
ENSMMUG00000009050	MBD1	100	85.556	ENSCLAG00000007457	MBD1	89	85.556	Chinchilla_lanigera
ENSMMUG00000009050	MBD1	100	95.556	ENSCSAG00000018070	MBD1	100	95.556	Chlorocebus_sabaeus
ENSMMUG00000009050	MBD1	100	99.206	ENSCANG00000033425	MBD1	100	99.206	Colobus_angolensis_palliatus
ENSMMUG00000009050	MBD1	100	72.082	ENSCGRG00001014843	Mbd1	100	72.082	Cricetulus_griseus_chok1gshd
ENSMMUG00000009050	MBD1	99	56.982	ENSCGRG00000014135	Mbd1	98	61.835	Cricetulus_griseus_crigri
ENSMMUG00000009050	MBD1	56	49.412	ENSCSEG00000009082	mbd1b	51	55.385	Cynoglossus_semilaevis
ENSMMUG00000009050	MBD1	100	82.726	ENSDNOG00000015998	MBD1	100	83.994	Dasypus_novemcinctus
ENSMMUG00000009050	MBD1	90	75.463	ENSDORG00000013917	Mbd1	97	75.926	Dipodomys_ordii
ENSMMUG00000009050	MBD1	100	86.392	ENSEASG00005003857	MBD1	100	87.975	Equus_asinus_asinus
ENSMMUG00000009050	MBD1	99	85.737	ENSECAG00000011497	MBD1	79	87.340	Equus_caballus
ENSMMUG00000009050	MBD1	76	50.725	ENSELUG00000004375	mbd1b	52	50.725	Esox_lucius
ENSMMUG00000009050	MBD1	100	88.133	ENSFCAG00000015730	MBD1	100	88.608	Felis_catus
ENSMMUG00000009050	MBD1	91	80.682	ENSFDAG00000011085	MBD1	95	80.660	Fukomys_damarensis
ENSMMUG00000009050	MBD1	53	53.846	ENSFHEG00000020120	mbd1b	51	31.579	Fundulus_heteroclitus
ENSMMUG00000009050	MBD1	70	30.711	ENSGACG00000012106	-	50	60.656	Gasterosteus_aculeatus
ENSMMUG00000009050	MBD1	100	99.048	ENSGGOG00000016966	MBD1	100	99.048	Gorilla_gorilla
ENSMMUG00000009050	MBD1	100	85.873	ENSHGLG00000008740	MBD1	100	85.873	Heterocephalus_glaber_female
ENSMMUG00000009050	MBD1	93	87.580	ENSHGLG00100005198	MBD1	100	87.821	Heterocephalus_glaber_male
ENSMMUG00000009050	MBD1	70	36.058	ENSHCOG00000009952	mbd1b	53	36.667	Hippocampus_comes
ENSMMUG00000009050	MBD1	100	80.000	ENSSTOG00000007780	MBD1	100	80.156	Ictidomys_tridecemlineatus
ENSMMUG00000009050	MBD1	98	67.903	ENSJJAG00000022859	Mbd1	98	72.958	Jaculus_jaculus
ENSMMUG00000009050	MBD1	88	35.490	ENSLACG00000002414	-	51	65.079	Latimeria_chalumnae
ENSMMUG00000009050	MBD1	99	71.975	ENSLAFG00000031328	MBD1	97	72.771	Loxodonta_africana
ENSMMUG00000009050	MBD1	100	100.000	ENSMFAG00000026335	MBD1	100	100.000	Macaca_fascicularis
ENSMMUG00000009050	MBD1	100	100.000	ENSMNEG00000038822	MBD1	100	100.000	Macaca_nemestrina
ENSMMUG00000009050	MBD1	100	99.683	ENSMLEG00000043121	MBD1	100	99.683	Mandrillus_leucophaeus
ENSMMUG00000009050	MBD1	50	81.041	ENSMAUG00000021798	-	97	81.041	Mesocricetus_auratus
ENSMMUG00000009050	MBD1	100	88.924	ENSMICG00000006414	MBD1	100	89.333	Microcebus_murinus
ENSMMUG00000009050	MBD1	51	73.852	ENSMOCG00000011976	-	100	73.852	Microtus_ochrogaster
ENSMMUG00000009050	MBD1	60	42.931	ENSMODG00000001286	-	58	42.402	Monodelphis_domestica
ENSMMUG00000009050	MBD1	99	64.985	ENSMUSG00000024561	Mbd1	97	65.850	Mus_musculus
ENSMMUG00000009050	MBD1	100	65.749	MGP_PahariEiJ_G0019128	Mbd1	100	66.055	Mus_pahari
ENSMMUG00000009050	MBD1	98	66.199	MGP_SPRETEiJ_G0023304	Mbd1	99	66.927	Mus_spretus
ENSMMUG00000009050	MBD1	100	87.184	ENSMPUG00000008843	MBD1	96	87.658	Mustela_putorius_furo
ENSMMUG00000009050	MBD1	100	85.397	ENSMLUG00000008286	MBD1	96	85.397	Myotis_lucifugus
ENSMMUG00000009050	MBD1	98	65.769	ENSNGAG00000011412	Mbd1	96	71.949	Nannospalax_galili
ENSMMUG00000009050	MBD1	100	98.545	ENSNLEG00000011661	-	100	98.545	Nomascus_leucogenys
ENSMMUG00000009050	MBD1	100	87.521	ENSNLEG00000032711	-	100	87.521	Nomascus_leucogenys
ENSMMUG00000009050	MBD1	100	72.063	ENSOPRG00000007647	MBD1	100	72.063	Ochotona_princeps
ENSMMUG00000009050	MBD1	93	81.019	ENSODEG00000018451	MBD1	98	75.592	Octodon_degus
ENSMMUG00000009050	MBD1	92	46.328	ENSOANG00000014593	-	98	47.969	Ornithorhynchus_anatinus
ENSMMUG00000009050	MBD1	100	83.994	ENSOCUG00000006554	MBD1	100	84.469	Oryctolagus_cuniculus
ENSMMUG00000009050	MBD1	72	30.383	ENSORLG00000029390	mbd1b	52	56.923	Oryzias_latipes
ENSMMUG00000009050	MBD1	72	31.010	ENSORLG00020000575	mbd1b	52	56.923	Oryzias_latipes_hni
ENSMMUG00000009050	MBD1	72	30.383	ENSORLG00015014812	mbd1b	53	56.923	Oryzias_latipes_hsok
ENSMMUG00000009050	MBD1	61	30.864	ENSOMEG00000023660	mbd1b	53	56.923	Oryzias_melastigma
ENSMMUG00000009050	MBD1	100	87.500	ENSOGAG00000003784	MBD1	96	87.500	Otolemur_garnettii
ENSMMUG00000009050	MBD1	100	86.234	ENSOARG00000004218	MBD1	95	87.025	Ovis_aries
ENSMMUG00000009050	MBD1	100	95.238	ENSPPAG00000038886	MBD1	100	95.238	Pan_paniscus
ENSMMUG00000009050	MBD1	100	88.291	ENSPPRG00000021387	MBD1	100	88.766	Panthera_pardus
ENSMMUG00000009050	MBD1	100	88.291	ENSPTIG00000021231	MBD1	100	88.766	Panthera_tigris_altaica
ENSMMUG00000009050	MBD1	100	99.206	ENSPTRG00000010021	MBD1	100	99.206	Pan_troglodytes
ENSMMUG00000009050	MBD1	100	99.647	ENSPANG00000010867	MBD1	100	99.647	Papio_anubis
ENSMMUG00000009050	MBD1	99	57.477	ENSPEMG00000022630	Mbd1	96	63.291	Peromyscus_maniculatus_bairdii
ENSMMUG00000009050	MBD1	96	46.508	ENSPCIG00000027937	-	79	45.234	Phascolarctos_cinereus
ENSMMUG00000009050	MBD1	100	95.238	ENSPPYG00000009158	MBD1	91	95.238	Pongo_abelii
ENSMMUG00000009050	MBD1	99	72.857	ENSPCAG00000001648	MBD1	93	85.878	Procavia_capensis
ENSMMUG00000009050	MBD1	100	89.065	ENSPCOG00000012450	MBD1	100	91.556	Propithecus_coquereli
ENSMMUG00000009050	MBD1	96	52.870	ENSRNOG00000024104	Mbd1	98	54.513	Rattus_norvegicus
ENSMMUG00000009050	MBD1	99	98.763	ENSRBIG00000041294	MBD1	99	98.763	Rhinopithecus_bieti
ENSMMUG00000009050	MBD1	100	99.048	ENSRROG00000032517	MBD1	100	99.048	Rhinopithecus_roxellana
ENSMMUG00000009050	MBD1	100	94.237	ENSSBOG00000027169	MBD1	100	93.967	Saimiri_boliviensis_boliviensis
ENSMMUG00000009050	MBD1	84	46.253	ENSSHAG00000003661	-	100	47.335	Sarcophilus_harrisii
ENSMMUG00000009050	MBD1	51	48.913	ENSSPAG00000021447	mbd1b	55	31.481	Stegastes_partitus
ENSMMUG00000009050	MBD1	99	85.370	ENSSSCG00000004516	MBD1	98	86.015	Sus_scrofa
ENSMMUG00000009050	MBD1	51	50.538	ENSTRUG00000013422	mbd1b	54	30.022	Takifugu_rubripes
ENSMMUG00000009050	MBD1	73	81.967	ENSTBEG00000012651	-	68	84.167	Tupaia_belangeri
ENSMMUG00000009050	MBD1	100	81.487	ENSTTRG00000015523	MBD1	100	82.278	Tursiops_truncatus
ENSMMUG00000009050	MBD1	99	82.504	ENSUAMG00000004752	MBD1	100	80.666	Ursus_americanus
ENSMMUG00000009050	MBD1	99	86.486	ENSUMAG00000002947	MBD1	100	84.652	Ursus_maritimus