EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000009302 (Gene tree)
Gene ID: 716917
Gene Symbol: -
Alias: -
Full Name: small nuclear ribonucleoprotein polypeptide F
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 42813 bases
Position: chr11:95715913-95758725
Accession: 716917
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000049937	LSM	PF01423.22	4e-21	1	1
ENSMMUP00000012185	LSM	PF01423.22	4.1e-21	1	1
ENSMMUP00000046440	LSM	PF01423.22	1.1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000013001	-	749	XM_015152468	ENSMMUP00000012185	86 (aa)	XP_015007954	F7H1G3
ENSMMUT00000064847	-	384	-	ENSMMUP00000046440	127 (aa)	-	A0A1D5QEH1
ENSMMUT00000059809	-	258	-	ENSMMUP00000049937	85 (aa)	-	A0A1D5QPG0

Gene Model

Click here to download ENSMMUG00000009302's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000009302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000009302	-	69	40.659	ENSMMUG00000014306	SRSF3	96	40.659
ENSMMUG00000009302	-	52	40.909	ENSMMUG00000005593	-	51	40.909

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000009302	-	50	97.674	ENSCHIG00000017139	-	87	91.525	Capra_hircus
ENSMMUG00000009302	-	100	100.000	ENSCATG00000003132	-	100	100.000	Cercocebus_atys
ENSMMUG00000009302	-	50	100.000	ENSCPBG00000001948	-	94	91.837	Chrysemys_picta_bellii
ENSMMUG00000009302	-	100	100.000	ENSCANG00000006758	-	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000009302	-	51	90.909	ENSFCAG00000032773	-	70	90.909	Felis_catus
ENSMMUG00000009302	-	91	58.974	ENSFCAG00000037511	-	87	61.644	Felis_catus
ENSMMUG00000009302	-	57	87.755	ENSGAGG00000014834	-	75	97.727	Gopherus_agassizii
ENSMMUG00000009302	-	51	97.674	ENSHBUG00000008160	-	72	97.674	Haplochromis_burtoni
ENSMMUG00000009302	-	100	100.000	ENSMFAG00000035517	-	100	100.000	Macaca_fascicularis
ENSMMUG00000009302	-	100	100.000	ENSMNEG00000030762	-	100	100.000	Macaca_nemestrina
ENSMMUG00000009302	-	100	100.000	ENSMLEG00000033558	-	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000009302	-	100	100.000	ENSNLEG00000005835	-	100	100.000	Nomascus_leucogenys
ENSMMUG00000009302	-	50	97.674	ENSOGAG00000014320	-	100	96.226	Otolemur_garnettii
ENSMMUG00000009302	-	100	100.000	ENSPPAG00000003072	-	100	100.000	Pan_paniscus
ENSMMUG00000009302	-	73	76.190	ENSPPRG00000020147	-	100	76.190	Panthera_pardus
ENSMMUG00000009302	-	100	100.000	ENSPTRG00000005317	-	93	100.000	Pan_troglodytes
ENSMMUG00000009302	-	99	100.000	ENSPANG00000014632	-	100	98.425	Papio_anubis
ENSMMUG00000009302	-	100	100.000	ENSPCIG00000017205	-	100	100.000	Phascolarctos_cinereus
ENSMMUG00000009302	-	53	93.478	ENSPFOG00000020883	-	100	93.478	Poecilia_formosa
ENSMMUG00000009302	-	100	100.000	ENSRBIG00000028811	-	100	100.000	Rhinopithecus_bieti
ENSMMUG00000009302	-	100	100.000	ENSRROG00000031057	-	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000009302	-	64	78.182	ENSVVUG00000003155	-	73	78.182	Vulpes_vulpes