EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000009844 (Gene tree)
Gene ID: 707987
Gene Symbol: R3HDM1
Alias: KIAA0029|R3HDM
Full Name: R3H domain containing 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 147691 bases
Position: chr12:21075423-21223113
Accession: 707987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000012884	R3H	PF01424.22	2.7e-11	1	1
ENSMMUP00000012885	R3H	PF01424.22	3.1e-11	1	1
ENSMMUP00000044359	R3H	PF01424.22	3.2e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000062618	R3HDM1-201	6090	XM_015109984	ENSMMUP00000044359	1099 (aa)	XP_014965470	A0A1D5Q8J1
ENSMMUT00000013750	R3HDM1-202	4399	XM_015109994	ENSMMUP00000012884	971 (aa)	XP_014965480	F7A1A2
ENSMMUT00000043055	R3HDM1-204	1362	-	ENSMMUP00000036069	453 (aa)	-	F7HFA6
ENSMMUT00000013751	R3HDM1-203	3135	XM_015110006	ENSMMUP00000012885	1044 (aa)	XP_014965492	F7A190

Gene Model

Click here to download ENSMMUG00000009844's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000009844's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000009844	R3HDM1	99	49.408	ENSMMUG00000021789	R3HDM2	95	57.421
ENSMMUG00000009844	R3HDM1	62	63.323	ENSMMUG00000015959	ARPP21	91	51.418

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000009844	R3HDM1	100	98.999	ENSG00000048991	R3HDM1	100	98.999	Homo_sapiens
ENSMMUG00000009844	R3HDM1	88	63.467	ENSAPOG00000020850	r3hdm1	84	64.096	Acanthochromis_polyacanthus
ENSMMUG00000009844	R3HDM1	100	94.742	ENSAMEG00000014886	R3HDM1	100	94.923	Ailuropoda_melanoleuca
ENSMMUG00000009844	R3HDM1	87	58.088	ENSAOCG00000005192	r3hdm1	84	64.337	Amphiprion_ocellaris
ENSMMUG00000009844	R3HDM1	87	63.200	ENSAPEG00000016108	r3hdm1	95	63.200	Amphiprion_percula
ENSMMUG00000009844	R3HDM1	87	63.441	ENSATEG00000000232	r3hdm1	87	63.768	Anabas_testudineus
ENSMMUG00000009844	R3HDM1	100	78.862	ENSAPLG00000015231	R3HDM1	100	79.133	Anas_platyrhynchos
ENSMMUG00000009844	R3HDM1	100	76.290	ENSACAG00000001676	R3HDM1	100	76.815	Anolis_carolinensis
ENSMMUG00000009844	R3HDM1	100	98.183	ENSANAG00000035334	R3HDM1	100	98.183	Aotus_nancymaae
ENSMMUG00000009844	R3HDM1	87	62.133	ENSACLG00000027282	r3hdm1	94	62.133	Astatotilapia_calliptera
ENSMMUG00000009844	R3HDM1	89	78.571	ENSAMXG00000012861	R3HDM1	100	60.667	Astyanax_mexicanus
ENSMMUG00000009844	R3HDM1	88	74.684	ENSAMXG00000003536	r3hdm1	89	74.603	Astyanax_mexicanus
ENSMMUG00000009844	R3HDM1	60	40.058	ENSAMXG00000020587	arpp21	82	38.486	Astyanax_mexicanus
ENSMMUG00000009844	R3HDM1	100	92.182	ENSBTAG00000013302	R3HDM1	100	91.205	Bos_taurus
ENSMMUG00000009844	R3HDM1	100	97.818	ENSCJAG00000011718	R3HDM1	100	97.818	Callithrix_jacchus
ENSMMUG00000009844	R3HDM1	100	94.923	ENSCAFG00000005075	R3HDM1	100	95.104	Canis_familiaris
ENSMMUG00000009844	R3HDM1	100	95.009	ENSCAFG00020016119	R3HDM1	100	95.191	Canis_lupus_dingo
ENSMMUG00000009844	R3HDM1	100	93.563	ENSCHIG00000020851	R3HDM1	100	93.835	Capra_hircus
ENSMMUG00000009844	R3HDM1	100	89.455	ENSCPOG00000012784	R3HDM1	100	89.543	Cavia_porcellus
ENSMMUG00000009844	R3HDM1	100	97.816	ENSCCAG00000027199	R3HDM1	100	97.816	Cebus_capucinus
ENSMMUG00000009844	R3HDM1	100	99.521	ENSCATG00000023642	R3HDM1	100	99.521	Cercocebus_atys
ENSMMUG00000009844	R3HDM1	100	88.918	ENSCLAG00000007962	R3HDM1	94	95.207	Chinchilla_lanigera
ENSMMUG00000009844	R3HDM1	100	96.473	ENSCSAG00000016356	R3HDM1	100	96.473	Chlorocebus_sabaeus
ENSMMUG00000009844	R3HDM1	80	93.939	ENSCHOG00000013638	R3HDM1	81	94.118	Choloepus_hoffmanni
ENSMMUG00000009844	R3HDM1	91	91.144	ENSCPBG00000009645	R3HDM1	100	91.144	Chrysemys_picta_bellii
ENSMMUG00000009844	R3HDM1	100	98.910	ENSCANG00000034748	R3HDM1	100	98.910	Colobus_angolensis_palliatus
ENSMMUG00000009844	R3HDM1	99	88.350	ENSCGRG00001012357	R3hdm1	97	88.438	Cricetulus_griseus_chok1gshd
ENSMMUG00000009844	R3HDM1	99	90.992	ENSCGRG00000012080	R3hdm1	100	91.030	Cricetulus_griseus_crigri
ENSMMUG00000009844	R3HDM1	81	65.246	ENSCSEG00000008944	r3hdm1	82	65.246	Cynoglossus_semilaevis
ENSMMUG00000009844	R3HDM1	87	61.067	ENSCVAG00000007582	r3hdm1	91	61.067	Cyprinodon_variegatus
ENSMMUG00000009844	R3HDM1	64	35.514	ENSDARG00000061081	arpp21	95	34.522	Danio_rerio
ENSMMUG00000009844	R3HDM1	100	91.368	ENSDNOG00000000771	R3HDM1	100	90.893	Dasypus_novemcinctus
ENSMMUG00000009844	R3HDM1	100	83.122	ENSETEG00000013606	R3HDM1	100	83.666	Echinops_telfairi
ENSMMUG00000009844	R3HDM1	66	41.667	ENSEBUG00000014746	arpp21	97	44.168	Eptatretus_burgeri
ENSMMUG00000009844	R3HDM1	100	98.066	ENSEASG00005007392	R3HDM1	100	94.918	Equus_asinus_asinus
ENSMMUG00000009844	R3HDM1	99	98.066	ENSECAG00000019114	R3HDM1	100	95.100	Equus_caballus
ENSMMUG00000009844	R3HDM1	91	86.876	ENSEEUG00000012589	R3HDM1	91	86.876	Erinaceus_europaeus
ENSMMUG00000009844	R3HDM1	83	77.670	ENSELUG00000004909	R3HDM1	99	55.369	Esox_lucius
ENSMMUG00000009844	R3HDM1	92	53.295	ENSELUG00000014413	r3hdm1	96	53.868	Esox_lucius
ENSMMUG00000009844	R3HDM1	100	97.790	ENSFCAG00000027113	R3HDM1	100	94.560	Felis_catus
ENSMMUG00000009844	R3HDM1	75	72.875	ENSFALG00000013731	R3HDM1	93	43.136	Ficedula_albicollis
ENSMMUG00000009844	R3HDM1	100	88.576	ENSFDAG00000016478	R3HDM1	100	90.033	Fukomys_damarensis
ENSMMUG00000009844	R3HDM1	87	57.108	ENSFHEG00000018713	r3hdm1	100	47.320	Fundulus_heteroclitus
ENSMMUG00000009844	R3HDM1	61	64.348	ENSGMOG00000006042	-	74	65.000	Gadus_morhua
ENSMMUG00000009844	R3HDM1	88	85.948	ENSGALG00000012246	R3HDM1	99	85.902	Gallus_gallus
ENSMMUG00000009844	R3HDM1	87	61.333	ENSGAFG00000006203	r3hdm1	95	61.333	Gambusia_affinis
ENSMMUG00000009844	R3HDM1	86	68.269	ENSGACG00000014925	r3hdm1	92	68.269	Gasterosteus_aculeatus
ENSMMUG00000009844	R3HDM1	99	83.662	ENSGAGG00000007840	R3HDM1	100	78.100	Gopherus_agassizii
ENSMMUG00000009844	R3HDM1	100	98.727	ENSGGOG00000008156	R3HDM1	100	98.727	Gorilla_gorilla
ENSMMUG00000009844	R3HDM1	100	88.996	ENSHGLG00000015718	R3HDM1	100	89.701	Heterocephalus_glaber_female
ENSMMUG00000009844	R3HDM1	100	68.812	ENSHGLG00100015374	-	100	73.245	Heterocephalus_glaber_male
ENSMMUG00000009844	R3HDM1	100	88.732	ENSHGLG00100003184	-	100	89.369	Heterocephalus_glaber_male
ENSMMUG00000009844	R3HDM1	87	59.517	ENSHCOG00000013366	r3hdm1	91	60.322	Hippocampus_comes
ENSMMUG00000009844	R3HDM1	89	68.615	ENSIPUG00000013629	r3hdm1	100	51.068	Ictalurus_punctatus
ENSMMUG00000009844	R3HDM1	82	73.668	ENSIPUG00000001676	R3HDM1	99	56.591	Ictalurus_punctatus
ENSMMUG00000009844	R3HDM1	100	95.277	ENSSTOG00000007572	R3HDM1	100	95.277	Ictidomys_tridecemlineatus
ENSMMUG00000009844	R3HDM1	94	85.806	ENSLACG00000005334	R3HDM1	100	70.936	Latimeria_chalumnae
ENSMMUG00000009844	R3HDM1	100	69.007	ENSLOCG00000001641	r3hdm1	100	66.192	Lepisosteus_oculatus
ENSMMUG00000009844	R3HDM1	100	90.845	ENSLAFG00000009065	R3HDM1	100	91.021	Loxodonta_africana
ENSMMUG00000009844	R3HDM1	100	99.904	ENSMFAG00000030331	R3HDM1	100	100.000	Macaca_fascicularis
ENSMMUG00000009844	R3HDM1	100	99.727	ENSMNEG00000027793	R3HDM1	100	100.000	Macaca_nemestrina
ENSMMUG00000009844	R3HDM1	100	99.808	ENSMLEG00000043189	R3HDM1	100	99.808	Mandrillus_leucophaeus
ENSMMUG00000009844	R3HDM1	87	62.466	ENSMAMG00000004532	r3hdm1	92	58.812	Mastacembelus_armatus
ENSMMUG00000009844	R3HDM1	87	62.133	ENSMZEG00005003157	r3hdm1	95	57.108	Maylandia_zebra
ENSMMUG00000009844	R3HDM1	100	78.410	ENSMGAG00000012461	R3HDM1	100	78.591	Meleagris_gallopavo
ENSMMUG00000009844	R3HDM1	100	86.812	ENSMAUG00000010315	R3hdm1	100	91.362	Mesocricetus_auratus
ENSMMUG00000009844	R3HDM1	95	92.424	ENSMICG00000042655	-	100	92.424	Microcebus_murinus
ENSMMUG00000009844	R3HDM1	100	93.931	ENSMICG00000005900	-	100	93.931	Microcebus_murinus
ENSMMUG00000009844	R3HDM1	89	78.469	ENSMODG00000000923	R3HDM1	97	77.471	Monodelphis_domestica
ENSMMUG00000009844	R3HDM1	99	58.065	ENSMALG00000009000	r3hdm1	91	58.065	Monopterus_albus
ENSMMUG00000009844	R3HDM1	100	86.415	MGP_CAROLIEiJ_G0014543	R3hdm1	100	94.561	Mus_caroli
ENSMMUG00000009844	R3HDM1	100	86.415	ENSMUSG00000056211	R3hdm1	100	94.561	Mus_musculus
ENSMMUG00000009844	R3HDM1	100	86.328	MGP_PahariEiJ_G0027779	R3hdm1	100	94.561	Mus_pahari
ENSMMUG00000009844	R3HDM1	100	86.591	MGP_SPRETEiJ_G0015350	R3hdm1	100	94.561	Mus_spretus
ENSMMUG00000009844	R3HDM1	100	94.470	ENSMPUG00000002412	R3HDM1	100	94.651	Mustela_putorius_furo
ENSMMUG00000009844	R3HDM1	100	92.676	ENSMLUG00000013824	R3HDM1	100	92.676	Myotis_lucifugus
ENSMMUG00000009844	R3HDM1	100	98.818	ENSNLEG00000008622	R3HDM1	100	98.818	Nomascus_leucogenys
ENSMMUG00000009844	R3HDM1	89	72.607	ENSMEUG00000011784	R3HDM1	100	72.811	Notamacropus_eugenii
ENSMMUG00000009844	R3HDM1	100	88.292	ENSODEG00000008607	R3HDM1	100	90.365	Octodon_degus
ENSMMUG00000009844	R3HDM1	94	66.873	ENSONIG00000012017	r3hdm1	91	66.873	Oreochromis_niloticus
ENSMMUG00000009844	R3HDM1	100	81.335	ENSOANG00000007987	R3HDM1	100	81.605	Ornithorhynchus_anatinus
ENSMMUG00000009844	R3HDM1	89	93.184	ENSOCUG00000017366	R3HDM1	98	93.388	Oryctolagus_cuniculus
ENSMMUG00000009844	R3HDM1	87	60.638	ENSORLG00000004297	r3hdm1	90	60.638	Oryzias_latipes
ENSMMUG00000009844	R3HDM1	89	61.067	ENSORLG00015017355	r3hdm1	91	61.067	Oryzias_latipes_hsok
ENSMMUG00000009844	R3HDM1	100	93.200	ENSOGAG00000003136	R3HDM1	100	93.200	Otolemur_garnettii
ENSMMUG00000009844	R3HDM1	100	93.382	ENSOARG00000010788	R3HDM1	100	93.654	Ovis_aries
ENSMMUG00000009844	R3HDM1	100	98.730	ENSPPAG00000027858	R3HDM1	100	98.730	Pan_paniscus
ENSMMUG00000009844	R3HDM1	100	94.251	ENSPPRG00000002626	R3HDM1	100	94.353	Panthera_pardus
ENSMMUG00000009844	R3HDM1	100	94.251	ENSPTIG00000016581	R3HDM1	100	94.353	Panthera_tigris_altaica
ENSMMUG00000009844	R3HDM1	100	98.819	ENSPTRG00000012494	R3HDM1	100	98.819	Pan_troglodytes
ENSMMUG00000009844	R3HDM1	100	99.808	ENSPANG00000026448	R3HDM1	100	99.808	Papio_anubis
ENSMMUG00000009844	R3HDM1	88	76.433	ENSPKIG00000004328	r3hdm1	91	76.677	Paramormyrops_kingsleyae
ENSMMUG00000009844	R3HDM1	100	78.481	ENSPSIG00000012915	R3HDM1	100	78.843	Pelodiscus_sinensis
ENSMMUG00000009844	R3HDM1	100	87.555	ENSPEMG00000015187	R3hdm1	100	91.030	Peromyscus_maniculatus_bairdii
ENSMMUG00000009844	R3HDM1	91	52.696	ENSPMAG00000003369	-	98	43.151	Petromyzon_marinus
ENSMMUG00000009844	R3HDM1	100	90.659	ENSPCIG00000002491	R3HDM1	100	83.874	Phascolarctos_cinereus
ENSMMUG00000009844	R3HDM1	87	55.474	ENSPFOG00000015036	r3hdm1	94	55.474	Poecilia_formosa
ENSMMUG00000009844	R3HDM1	87	59.947	ENSPLAG00000018042	r3hdm1	91	59.947	Poecilia_latipinna
ENSMMUG00000009844	R3HDM1	87	59.947	ENSPMEG00000023947	r3hdm1	91	59.947	Poecilia_mexicana
ENSMMUG00000009844	R3HDM1	81	68.608	ENSPREG00000007902	r3hdm1	94	60.000	Poecilia_reticulata
ENSMMUG00000009844	R3HDM1	100	97.727	ENSPPYG00000012815	R3HDM1	100	97.727	Pongo_abelii
ENSMMUG00000009844	R3HDM1	100	82.033	ENSPCAG00000006208	R3HDM1	100	81.397	Procavia_capensis
ENSMMUG00000009844	R3HDM1	100	93.811	ENSPCOG00000012698	R3HDM1	100	93.964	Propithecus_coquereli
ENSMMUG00000009844	R3HDM1	100	85.857	ENSPVAG00000006098	R3HDM1	100	85.857	Pteropus_vampyrus
ENSMMUG00000009844	R3HDM1	67	38.441	ENSPNAG00000004162	arpp21	85	38.725	Pygocentrus_nattereri
ENSMMUG00000009844	R3HDM1	88	76.603	ENSPNAG00000005436	R3HDM1	99	76.527	Pygocentrus_nattereri
ENSMMUG00000009844	R3HDM1	94	74.522	ENSPNAG00000013952	r3hdm1	95	57.837	Pygocentrus_nattereri
ENSMMUG00000009844	R3HDM1	100	85.714	ENSRNOG00000004099	R3hdm1	100	86.532	Rattus_norvegicus
ENSMMUG00000009844	R3HDM1	100	98.532	ENSRBIG00000033317	R3HDM1	100	99.631	Rhinopithecus_bieti
ENSMMUG00000009844	R3HDM1	100	99.448	ENSRROG00000034534	R3HDM1	100	99.091	Rhinopithecus_roxellana
ENSMMUG00000009844	R3HDM1	100	97.545	ENSSBOG00000020389	R3HDM1	100	97.545	Saimiri_boliviensis_boliviensis
ENSMMUG00000009844	R3HDM1	100	83.891	ENSSHAG00000016999	R3HDM1	100	84.072	Sarcophilus_harrisii
ENSMMUG00000009844	R3HDM1	100	56.572	ENSSFOG00015019851	-	100	56.306	Scleropages_formosus
ENSMMUG00000009844	R3HDM1	89	78.193	ENSSFOG00015014134	r3hdm1	100	70.631	Scleropages_formosus
ENSMMUG00000009844	R3HDM1	99	60.541	ENSSMAG00000001669	r3hdm1	99	44.606	Scophthalmus_maximus
ENSMMUG00000009844	R3HDM1	87	62.766	ENSSDUG00000010749	r3hdm1	91	62.766	Seriola_dumerili
ENSMMUG00000009844	R3HDM1	92	69.231	ENSSLDG00000004499	r3hdm1	91	57.457	Seriola_lalandi_dorsalis
ENSMMUG00000009844	R3HDM1	74	79.130	ENSSARG00000000352	-	69	82.724	Sorex_araneus
ENSMMUG00000009844	R3HDM1	100	80.126	ENSSPUG00000004167	R3HDM1	100	80.217	Sphenodon_punctatus
ENSMMUG00000009844	R3HDM1	87	63.467	ENSSPAG00000004648	r3hdm1	91	63.467	Stegastes_partitus
ENSMMUG00000009844	R3HDM1	100	97.238	ENSSSCG00000015692	R3HDM1	100	94.832	Sus_scrofa
ENSMMUG00000009844	R3HDM1	100	73.622	ENSTGUG00000011750	R3HDM1	100	73.351	Taeniopygia_guttata
ENSMMUG00000009844	R3HDM1	81	67.532	ENSTRUG00000011654	r3hdm1	91	57.841	Takifugu_rubripes
ENSMMUG00000009844	R3HDM1	82	67.732	ENSTNIG00000010362	r3hdm1	95	45.777	Tetraodon_nigroviridis
ENSMMUG00000009844	R3HDM1	100	87.205	ENSTTRG00000003935	R3HDM1	100	87.477	Tursiops_truncatus
ENSMMUG00000009844	R3HDM1	70	96.134	ENSUAMG00000024806	R3HDM1	94	95.146	Ursus_americanus
ENSMMUG00000009844	R3HDM1	100	93.943	ENSUMAG00000005552	R3HDM1	100	94.045	Ursus_maritimus
ENSMMUG00000009844	R3HDM1	97	94.485	ENSVPAG00000007333	R3HDM1	93	91.228	Vicugna_pacos
ENSMMUG00000009844	R3HDM1	100	97.790	ENSVVUG00000006457	R3HDM1	100	91.894	Vulpes_vulpes
ENSMMUG00000009844	R3HDM1	90	67.573	ENSXETG00000019330	r3hdm1	100	67.372	Xenopus_tropicalis
ENSMMUG00000009844	R3HDM1	71	49.936	ENSXCOG00000017448	r3hdm1	94	50.194	Xiphophorus_couchianus
ENSMMUG00000009844	R3HDM1	81	68.285	ENSXMAG00000007885	r3hdm1	88	61.867	Xiphophorus_maculatus