EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000010155 (Gene tree)
Gene ID: 695835
Gene Symbol: PRPF38B
Alias: -
Full Name: pre-mRNA processing factor 38B
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 10316 bases
Position: chr1:109653869-109664184
Accession: 695835
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000013278	PRP38	PF03371.15	2.5e-57	1	1
ENSMMUP00000045482	PRP38	PF03371.15	7.8e-52	1	1
ENSMMUP00000039554	PRP38	PF03371.15	1.1e-47	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000014178	PRPF38B-201	4470	XM_015146394	ENSMMUP00000013278	546 (aa)	XP_015001880	F6QPW1
ENSMMUT00000055187	PRPF38B-202	1623	-	ENSMMUP00000045482	540 (aa)	-	A0A1D5QBR3
ENSMMUT00000046522	PRPF38B-203	573	-	ENSMMUP00000039554	190 (aa)	-	F7H0L0

Gene Model

Click here to download ENSMMUG00000010155's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000010155's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000010155	PRPF38B	100	98.535	ENSCJAG00000002510	-	100	98.535	Callithrix_jacchus
ENSMMUG00000010155	PRPF38B	80	95.402	ENSTSYG00000029817	PRPF38B	100	94.279	Carlito_syrichta
ENSMMUG00000010155	PRPF38B	100	100.000	ENSCCAG00000033941	-	100	100.000	Cebus_capucinus
ENSMMUG00000010155	PRPF38B	100	99.817	ENSCSAG00000001531	PRPF38B	100	99.817	Chlorocebus_sabaeus
ENSMMUG00000010155	PRPF38B	100	100.000	ENSCANG00000027711	PRPF38B	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000010155	PRPF38B	100	98.718	ENSLAFG00000017112	PRPF38B	100	98.718	Loxodonta_africana
ENSMMUG00000010155	PRPF38B	100	100.000	ENSMNEG00000032003	-	100	100.000	Macaca_nemestrina
ENSMMUG00000010155	PRPF38B	100	100.000	ENSMICG00000032109	PRPF38B	100	100.000	Microcebus_murinus
ENSMMUG00000010155	PRPF38B	80	96.782	ENSODEG00000007646	PRPF38B	100	96.782	Octodon_degus
ENSMMUG00000010155	PRPF38B	83	98.678	ENSOCUG00000027424	PRPF38B	100	98.678	Oryctolagus_cuniculus
ENSMMUG00000010155	PRPF38B	100	99.267	ENSPPYG00000001092	PRPF38B	100	99.267	Pongo_abelii
ENSMMUG00000010155	PRPF38B	100	100.000	ENSPCOG00000016051	PRPF38B	100	100.000	Propithecus_coquereli
ENSMMUG00000010155	PRPF38B	100	100.000	ENSRBIG00000043351	PRPF38B	100	100.000	Rhinopithecus_bieti
ENSMMUG00000010155	PRPF38B	100	100.000	ENSRROG00000029232	PRPF38B	100	100.000	Rhinopithecus_roxellana