EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000010295 (Gene tree)
Gene ID: 709174
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 81466 bases
Position: chr3:14262775-14344240
Accession: 709174
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000013479	Npa1	PF11707.8	1.1e-85	1	1
ENSMMUP00000054918	Npa1	PF11707.8	1.2e-85	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000055131	URB1-201	11155	XM_015133032	ENSMMUP00000054918	2271 (aa)	XP_014988518	A0A1D5R3N2
ENSMMUT00000014389	URB1-202	6717	-	ENSMMUP00000013479	2238 (aa)	-	F6T9B6

Gene Model

Click here to download ENSMMUG00000010295's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000010295's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000010295	URB1	99	95.225	ENSG00000142207	URB1	100	95.200	Homo_sapiens
ENSMMUG00000010295	URB1	99	43.645	ENSAPOG00000020308	urb1	100	43.733	Acanthochromis_polyacanthus
ENSMMUG00000010295	URB1	100	81.338	ENSAMEG00000011998	URB1	99	81.382	Ailuropoda_melanoleuca
ENSMMUG00000010295	URB1	95	44.362	ENSACIG00000003248	urb1	97	44.501	Amphilophus_citrinellus
ENSMMUG00000010295	URB1	99	41.568	ENSAOCG00000010364	urb1	100	41.656	Amphiprion_ocellaris
ENSMMUG00000010295	URB1	97	53.158	ENSAPEG00000010758	urb1	99	53.053	Amphiprion_percula
ENSMMUG00000010295	URB1	99	43.541	ENSATEG00000011790	urb1	97	44.356	Anabas_testudineus
ENSMMUG00000010295	URB1	97	56.473	ENSAPLG00000012791	URB1	100	56.382	Anas_platyrhynchos
ENSMMUG00000010295	URB1	99	54.111	ENSACAG00000002817	URB1	98	53.755	Anolis_carolinensis
ENSMMUG00000010295	URB1	100	93.398	ENSANAG00000024617	URB1	100	93.398	Aotus_nancymaae
ENSMMUG00000010295	URB1	99	45.000	ENSACLG00000024865	urb1	100	44.846	Astatotilapia_calliptera
ENSMMUG00000010295	URB1	99	40.105	ENSAMXG00000012306	urb1	99	40.176	Astyanax_mexicanus
ENSMMUG00000010295	URB1	99	77.641	ENSBTAG00000012412	URB1	99	77.729	Bos_taurus
ENSMMUG00000010295	URB1	100	92.308	ENSCJAG00000009118	URB1	100	92.308	Callithrix_jacchus
ENSMMUG00000010295	URB1	100	81.703	ENSCAFG00000008892	URB1	100	81.703	Canis_familiaris
ENSMMUG00000010295	URB1	100	81.706	ENSCAFG00020025987	-	100	81.706	Canis_lupus_dingo
ENSMMUG00000010295	URB1	100	80.695	ENSCAFG00020025994	-	100	80.695	Canis_lupus_dingo
ENSMMUG00000010295	URB1	99	76.765	ENSCHIG00000015645	URB1	99	76.852	Capra_hircus
ENSMMUG00000010295	URB1	100	86.350	ENSTSYG00000013286	URB1	99	86.350	Carlito_syrichta
ENSMMUG00000010295	URB1	98	79.172	ENSCAPG00000015589	URB1	99	79.172	Cavia_aperea
ENSMMUG00000010295	URB1	99	80.326	ENSCPOG00000006748	URB1	99	80.326	Cavia_porcellus
ENSMMUG00000010295	URB1	100	93.351	ENSCCAG00000021299	URB1	100	93.351	Cebus_capucinus
ENSMMUG00000010295	URB1	100	98.503	ENSCATG00000042630	URB1	100	98.503	Cercocebus_atys
ENSMMUG00000010295	URB1	100	80.703	ENSCLAG00000005262	URB1	100	80.703	Chinchilla_lanigera
ENSMMUG00000010295	URB1	100	96.493	ENSCSAG00000009584	URB1	100	96.493	Chlorocebus_sabaeus
ENSMMUG00000010295	URB1	99	59.135	ENSCPBG00000006454	URB1	99	59.014	Chrysemys_picta_bellii
ENSMMUG00000010295	URB1	100	97.754	ENSCANG00000031088	URB1	100	97.754	Colobus_angolensis_palliatus
ENSMMUG00000010295	URB1	99	76.861	ENSCGRG00001010616	Urb1	99	76.585	Cricetulus_griseus_chok1gshd
ENSMMUG00000010295	URB1	98	76.463	ENSCGRG00000015840	Urb1	99	76.463	Cricetulus_griseus_crigri
ENSMMUG00000010295	URB1	99	42.435	ENSCSEG00000012616	urb1	99	42.513	Cynoglossus_semilaevis
ENSMMUG00000010295	URB1	97	51.832	ENSCVAG00000009076	urb1	99	52.489	Cyprinodon_variegatus
ENSMMUG00000010295	URB1	99	43.659	ENSDARG00000060308	urb1	99	44.175	Danio_rerio
ENSMMUG00000010295	URB1	85	80.694	ENSDNOG00000015586	URB1	99	80.694	Dasypus_novemcinctus
ENSMMUG00000010295	URB1	100	79.930	ENSDORG00000006735	Urb1	100	79.930	Dipodomys_ordii
ENSMMUG00000010295	URB1	92	80.663	ENSETEG00000009080	URB1	91	81.973	Echinops_telfairi
ENSMMUG00000010295	URB1	100	81.734	ENSEASG00005007711	URB1	100	81.662	Equus_asinus_asinus
ENSMMUG00000010295	URB1	97	88.889	ENSECAG00000013206	URB1	100	88.801	Equus_caballus
ENSMMUG00000010295	URB1	56	84.583	ENSEEUG00000003626	-	57	84.583	Erinaceus_europaeus
ENSMMUG00000010295	URB1	99	45.143	ENSELUG00000020516	urb1	98	45.333	Esox_lucius
ENSMMUG00000010295	URB1	100	81.698	ENSFCAG00000002177	URB1	100	81.778	Felis_catus
ENSMMUG00000010295	URB1	94	57.177	ENSFALG00000004636	URB1	94	56.727	Ficedula_albicollis
ENSMMUG00000010295	URB1	100	80.465	ENSFDAG00000007288	URB1	95	80.465	Fukomys_damarensis
ENSMMUG00000010295	URB1	99	41.586	ENSFHEG00000000202	urb1	99	41.989	Fundulus_heteroclitus
ENSMMUG00000010295	URB1	93	47.710	ENSGMOG00000001838	urb1	94	47.441	Gadus_morhua
ENSMMUG00000010295	URB1	99	56.693	ENSGALG00000015887	URB1	99	56.803	Gallus_gallus
ENSMMUG00000010295	URB1	99	42.895	ENSGAFG00000020694	urb1	97	52.973	Gambusia_affinis
ENSMMUG00000010295	URB1	99	44.308	ENSGACG00000011703	urb1	99	44.254	Gasterosteus_aculeatus
ENSMMUG00000010295	URB1	99	58.515	ENSGAGG00000022544	URB1	99	58.395	Gopherus_agassizii
ENSMMUG00000010295	URB1	100	95.244	ENSGGOG00000000285	URB1	100	95.244	Gorilla_gorilla
ENSMMUG00000010295	URB1	99	45.087	ENSHBUG00000001904	urb1	100	44.957	Haplochromis_burtoni
ENSMMUG00000010295	URB1	99	78.804	ENSHGLG00000004907	URB1	99	78.804	Heterocephalus_glaber_female
ENSMMUG00000010295	URB1	99	79.578	ENSHGLG00100010749	URB1	99	79.578	Heterocephalus_glaber_male
ENSMMUG00000010295	URB1	74	47.451	ENSHCOG00000018683	urb1	97	47.843	Hippocampus_comes
ENSMMUG00000010295	URB1	99	40.851	ENSIPUG00000014721	urb1	99	40.939	Ictalurus_punctatus
ENSMMUG00000010295	URB1	100	82.549	ENSSTOG00000004539	URB1	100	82.549	Ictidomys_tridecemlineatus
ENSMMUG00000010295	URB1	95	47.237	ENSKMAG00000006001	urb1	99	47.294	Kryptolebias_marmoratus
ENSMMUG00000010295	URB1	95	51.261	ENSLBEG00000027208	urb1	99	51.499	Labrus_bergylta
ENSMMUG00000010295	URB1	99	48.659	ENSLACG00000017059	URB1	100	48.616	Latimeria_chalumnae
ENSMMUG00000010295	URB1	99	46.174	ENSLOCG00000009190	urb1	99	46.349	Lepisosteus_oculatus
ENSMMUG00000010295	URB1	99	78.355	ENSLAFG00000010407	URB1	99	78.355	Loxodonta_africana
ENSMMUG00000010295	URB1	100	99.384	ENSMFAG00000034391	URB1	97	99.384	Macaca_fascicularis
ENSMMUG00000010295	URB1	100	97.754	ENSMNEG00000032981	URB1	100	97.754	Macaca_nemestrina
ENSMMUG00000010295	URB1	100	98.899	ENSMLEG00000041435	URB1	100	98.899	Mandrillus_leucophaeus
ENSMMUG00000010295	URB1	99	43.667	ENSMAMG00000011238	urb1	99	43.636	Mastacembelus_armatus
ENSMMUG00000010295	URB1	99	40.897	ENSMZEG00005011862	urb1	100	40.638	Maylandia_zebra
ENSMMUG00000010295	URB1	98	57.543	ENSMGAG00000014512	URB1	99	57.454	Meleagris_gallopavo
ENSMMUG00000010295	URB1	92	79.562	ENSMAUG00000010516	Urb1	99	79.529	Mesocricetus_auratus
ENSMMUG00000010295	URB1	99	85.557	ENSMICG00000016424	URB1	99	85.557	Microcebus_murinus
ENSMMUG00000010295	URB1	99	74.493	ENSMOCG00000012613	Urb1	99	74.449	Microtus_ochrogaster
ENSMMUG00000010295	URB1	99	64.417	ENSMODG00000021076	URB1	100	64.417	Monodelphis_domestica
ENSMMUG00000010295	URB1	94	52.697	ENSMALG00000017411	urb1	96	53.326	Monopterus_albus
ENSMMUG00000010295	URB1	99	75.539	MGP_CAROLIEiJ_G0020948	Urb1	99	75.539	Mus_caroli
ENSMMUG00000010295	URB1	99	75.979	ENSMUSG00000039929	Urb1	99	75.979	Mus_musculus
ENSMMUG00000010295	URB1	99	75.979	MGP_PahariEiJ_G0016653	Urb1	99	75.979	Mus_pahari
ENSMMUG00000010295	URB1	99	75.704	MGP_SPRETEiJ_G0021854	Urb1	99	75.704	Mus_spretus
ENSMMUG00000010295	URB1	100	80.238	ENSMPUG00000001123	URB1	100	80.238	Mustela_putorius_furo
ENSMMUG00000010295	URB1	99	77.147	ENSNGAG00000001905	Urb1	99	77.103	Nannospalax_galili
ENSMMUG00000010295	URB1	82	45.636	ENSNBRG00000001049	urb1	99	45.461	Neolamprologus_brichardi
ENSMMUG00000010295	URB1	99	93.855	ENSNLEG00000026872	URB1	100	93.835	Nomascus_leucogenys
ENSMMUG00000010295	URB1	96	59.193	ENSMEUG00000010828	URB1	96	59.065	Notamacropus_eugenii
ENSMMUG00000010295	URB1	99	74.517	ENSOPRG00000013482	URB1	100	74.517	Ochotona_princeps
ENSMMUG00000010295	URB1	100	79.341	ENSODEG00000002587	URB1	99	79.341	Octodon_degus
ENSMMUG00000010295	URB1	99	45.292	ENSONIG00000005599	urb1	100	45.248	Oreochromis_niloticus
ENSMMUG00000010295	URB1	99	80.688	ENSOCUG00000009381	URB1	99	80.688	Oryctolagus_cuniculus
ENSMMUG00000010295	URB1	99	43.892	ENSORLG00000003429	urb1	99	43.868	Oryzias_latipes
ENSMMUG00000010295	URB1	99	43.772	ENSORLG00020013785	urb1	99	43.810	Oryzias_latipes_hni
ENSMMUG00000010295	URB1	95	47.046	ENSORLG00015019421	urb1	97	47.182	Oryzias_latipes_hsok
ENSMMUG00000010295	URB1	77	50.937	ENSOMEG00000002094	urb1	98	50.937	Oryzias_melastigma
ENSMMUG00000010295	URB1	99	84.758	ENSOGAG00000017140	URB1	100	84.758	Otolemur_garnettii
ENSMMUG00000010295	URB1	97	77.759	ENSOARG00000013679	URB1	99	77.674	Ovis_aries
ENSMMUG00000010295	URB1	100	95.685	ENSPPAG00000003423	URB1	100	95.685	Pan_paniscus
ENSMMUG00000010295	URB1	100	81.734	ENSPPRG00000023131	URB1	100	81.734	Panthera_pardus
ENSMMUG00000010295	URB1	92	79.941	ENSPTIG00000016125	URB1	97	80.347	Panthera_tigris_altaica
ENSMMUG00000010295	URB1	100	95.553	ENSPTRG00000013852	URB1	100	95.553	Pan_troglodytes
ENSMMUG00000010295	URB1	100	98.943	ENSPANG00000021964	URB1	100	98.943	Papio_anubis
ENSMMUG00000010295	URB1	99	45.727	ENSPKIG00000003683	urb1	98	45.826	Paramormyrops_kingsleyae
ENSMMUG00000010295	URB1	99	76.509	ENSPEMG00000021205	Urb1	99	76.509	Peromyscus_maniculatus_bairdii
ENSMMUG00000010295	URB1	73	37.614	ENSPMAG00000009733	URB1	100	34.372	Petromyzon_marinus
ENSMMUG00000010295	URB1	99	64.214	ENSPCIG00000016350	URB1	100	64.126	Phascolarctos_cinereus
ENSMMUG00000010295	URB1	96	43.288	ENSPLAG00000004371	urb1	99	43.235	Poecilia_latipinna
ENSMMUG00000010295	URB1	99	43.703	ENSPMEG00000006634	urb1	98	43.742	Poecilia_mexicana
ENSMMUG00000010295	URB1	99	43.780	ENSPREG00000013453	urb1	99	43.620	Poecilia_reticulata
ENSMMUG00000010295	URB1	99	95.049	ENSPPYG00000011359	URB1	100	95.024	Pongo_abelii
ENSMMUG00000010295	URB1	99	67.564	ENSPCAG00000007430	URB1	99	67.564	Procavia_capensis
ENSMMUG00000010295	URB1	100	86.570	ENSPCOG00000022695	URB1	100	86.570	Propithecus_coquereli
ENSMMUG00000010295	URB1	100	79.842	ENSPVAG00000000889	URB1	100	79.665	Pteropus_vampyrus
ENSMMUG00000010295	URB1	99	43.673	ENSPNYG00000010589	urb1	100	43.516	Pundamilia_nyererei
ENSMMUG00000010295	URB1	99	41.241	ENSPNAG00000019324	urb1	99	40.889	Pygocentrus_nattereri
ENSMMUG00000010295	URB1	99	75.858	ENSRNOG00000002080	Urb1	99	75.989	Rattus_norvegicus
ENSMMUG00000010295	URB1	100	97.226	ENSRBIG00000033122	URB1	100	97.226	Rhinopithecus_bieti
ENSMMUG00000010295	URB1	100	97.270	ENSRROG00000040237	URB1	100	97.270	Rhinopithecus_roxellana
ENSMMUG00000010295	URB1	100	92.342	ENSSBOG00000027672	URB1	100	92.342	Saimiri_boliviensis_boliviensis
ENSMMUG00000010295	URB1	99	64.030	ENSSHAG00000005140	URB1	100	64.030	Sarcophilus_harrisii
ENSMMUG00000010295	URB1	93	46.237	ENSSFOG00015000339	urb1	99	46.049	Scleropages_formosus
ENSMMUG00000010295	URB1	99	44.030	ENSSMAG00000003782	urb1	99	44.094	Scophthalmus_maximus
ENSMMUG00000010295	URB1	99	44.831	ENSSDUG00000012313	urb1	99	44.570	Seriola_dumerili
ENSMMUG00000010295	URB1	99	44.772	ENSSLDG00000023179	urb1	99	44.512	Seriola_lalandi_dorsalis
ENSMMUG00000010295	URB1	99	55.768	ENSSPUG00000012447	URB1	99	55.824	Sphenodon_punctatus
ENSMMUG00000010295	URB1	99	44.464	ENSSPAG00000006325	urb1	99	44.194	Stegastes_partitus
ENSMMUG00000010295	URB1	100	78.505	ENSSSCG00000032024	URB1	100	78.462	Sus_scrofa
ENSMMUG00000010295	URB1	73	58.254	ENSTGUG00000013442	URB1	100	57.800	Taeniopygia_guttata
ENSMMUG00000010295	URB1	99	43.843	ENSTRUG00000009372	urb1	99	43.929	Takifugu_rubripes
ENSMMUG00000010295	URB1	99	42.907	ENSTNIG00000016277	urb1	100	42.857	Tetraodon_nigroviridis
ENSMMUG00000010295	URB1	81	84.928	ENSTBEG00000010044	URB1	81	84.928	Tupaia_belangeri
ENSMMUG00000010295	URB1	91	79.289	ENSTTRG00000007712	URB1	92	79.498	Tursiops_truncatus
ENSMMUG00000010295	URB1	100	81.206	ENSUAMG00000012231	URB1	99	81.206	Ursus_americanus
ENSMMUG00000010295	URB1	94	81.384	ENSUMAG00000017419	URB1	98	82.626	Ursus_maritimus
ENSMMUG00000010295	URB1	68	87.302	ENSVPAG00000001164	URB1	68	87.302	Vicugna_pacos
ENSMMUG00000010295	URB1	100	81.371	ENSVVUG00000000551	URB1	100	81.371	Vulpes_vulpes
ENSMMUG00000010295	URB1	99	50.043	ENSXETG00000009895	urb1	99	50.393	Xenopus_tropicalis
ENSMMUG00000010295	URB1	99	41.102	ENSXCOG00000005500	urb1	99	41.138	Xiphophorus_couchianus
ENSMMUG00000010295	URB1	99	41.164	ENSXMAG00000007253	urb1	99	41.200	Xiphophorus_maculatus