EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000010379 (Gene tree)
Gene ID: 706419
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 125365 bases
Position: chr6:56220151-56345515
Accession: 706419
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000013605	rRNA_proc-arch	PF13234.6	2.7e-87	1	1
ENSMMUP00000059510	rRNA_proc-arch	PF13234.6	3e-87	1	1
ENSMMUP00000013605	DEAD	PF00270.29	6.6e-17	1	1
ENSMMUP00000059510	DEAD	PF00270.29	6.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000014522	MTREX-202	3156	-	ENSMMUP00000013605	1051 (aa)	-	F7D9W7
ENSMMUT00000070566	MTREX-201	3135	XM_015140078	ENSMMUP00000059510	1044 (aa)	XP_014995564	A0A1D5RGR6

Gene Model

Click here to download ENSMMUG00000010379's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03018	RNA degradation	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000010379's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000010379	MTREX	89	36.890	ENSMMUG00000000736	SKIV2L	87	36.569

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000010379	MTREX	100	97.893	ENSG00000039123	MTREX	100	97.893	Homo_sapiens
ENSMMUG00000010379	MTREX	100	82.922	ENSAPOG00000007814	mtrex	100	83.143	Acanthochromis_polyacanthus
ENSMMUG00000010379	MTREX	100	96.938	ENSAMEG00000013856	MTREX	100	96.938	Ailuropoda_melanoleuca
ENSMMUG00000010379	MTREX	91	87.774	ENSACIG00000015117	mtrex	96	87.774	Amphilophus_citrinellus
ENSMMUG00000010379	MTREX	100	82.762	ENSAOCG00000011884	mtrex	100	82.762	Amphiprion_ocellaris
ENSMMUG00000010379	MTREX	100	82.969	ENSAPEG00000019384	mtrex	100	82.969	Amphiprion_percula
ENSMMUG00000010379	MTREX	100	83.635	ENSATEG00000015117	mtrex	100	83.524	Anabas_testudineus
ENSMMUG00000010379	MTREX	93	94.142	ENSAPLG00000009694	MTREX	98	94.142	Anas_platyrhynchos
ENSMMUG00000010379	MTREX	100	90.517	ENSACAG00000015200	MTREX	96	90.421	Anolis_carolinensis
ENSMMUG00000010379	MTREX	100	97.510	ENSANAG00000023095	MTREX	99	98.835	Aotus_nancymaae
ENSMMUG00000010379	MTREX	100	82.762	ENSACLG00000001921	mtrex	100	82.857	Astatotilapia_calliptera
ENSMMUG00000010379	MTREX	97	81.765	ENSAMXG00000018751	mtrex	99	83.936	Astyanax_mexicanus
ENSMMUG00000010379	MTREX	100	96.839	ENSBTAG00000010518	MTREX	100	96.839	Bos_taurus
ENSMMUG00000010379	MTREX	91	53.733	WBGene00012342	mtr-4	97	52.343	Caenorhabditis_elegans
ENSMMUG00000010379	MTREX	98	98.927	ENSCJAG00000001773	MTREX	100	96.565	Callithrix_jacchus
ENSMMUG00000010379	MTREX	100	97.222	ENSCAFG00000006818	MTREX	100	97.222	Canis_familiaris
ENSMMUG00000010379	MTREX	100	97.222	ENSCAFG00020024352	MTREX	100	97.222	Canis_lupus_dingo
ENSMMUG00000010379	MTREX	100	96.839	ENSCHIG00000024413	MTREX	100	96.839	Capra_hircus
ENSMMUG00000010379	MTREX	94	98.205	ENSTSYG00000007389	MTREX	100	98.205	Carlito_syrichta
ENSMMUG00000010379	MTREX	95	73.131	ENSCAPG00000008696	MTREX	99	73.131	Cavia_aperea
ENSMMUG00000010379	MTREX	100	96.648	ENSCPOG00000009797	MTREX	100	96.648	Cavia_porcellus
ENSMMUG00000010379	MTREX	100	97.510	ENSCCAG00000014177	MTREX	100	97.510	Cebus_capucinus
ENSMMUG00000010379	MTREX	100	99.810	ENSCATG00000042153	MTREX	100	99.810	Cercocebus_atys
ENSMMUG00000010379	MTREX	100	96.743	ENSCLAG00000006622	MTREX	100	96.743	Chinchilla_lanigera
ENSMMUG00000010379	MTREX	100	93.601	ENSCSAG00000016445	MTREX	100	93.601	Chlorocebus_sabaeus
ENSMMUG00000010379	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSMMUG00000010379	MTREX	100	90.304	ENSCPBG00000026551	MTREX	94	90.918	Chrysemys_picta_bellii
ENSMMUG00000010379	MTREX	99	66.412	ENSCING00000003239	-	99	65.935	Ciona_intestinalis
ENSMMUG00000010379	MTREX	99	65.337	ENSCSAVG00000009304	-	100	70.000	Ciona_savignyi
ENSMMUG00000010379	MTREX	100	99.619	ENSCANG00000035770	MTREX	100	99.619	Colobus_angolensis_palliatus
ENSMMUG00000010379	MTREX	100	96.743	ENSCGRG00001024680	Mtrex	100	96.743	Cricetulus_griseus_chok1gshd
ENSMMUG00000010379	MTREX	100	96.743	ENSCGRG00000000307	Mtrex	100	96.743	Cricetulus_griseus_crigri
ENSMMUG00000010379	MTREX	100	82.078	ENSCSEG00000018621	mtrex	98	82.078	Cynoglossus_semilaevis
ENSMMUG00000010379	MTREX	100	83.460	ENSCVAG00000004556	mtrex	100	83.333	Cyprinodon_variegatus
ENSMMUG00000010379	MTREX	100	84.557	ENSDARG00000013457	mtrex	100	83.886	Danio_rerio
ENSMMUG00000010379	MTREX	100	95.698	ENSDNOG00000015375	MTREX	100	95.411	Dasypus_novemcinctus
ENSMMUG00000010379	MTREX	100	96.743	ENSDORG00000006782	Mtrex	100	96.743	Dipodomys_ordii
ENSMMUG00000010379	MTREX	92	66.701	FBgn0001986	Mtr4	92	65.988	Drosophila_melanogaster
ENSMMUG00000010379	MTREX	90	78.601	ENSETEG00000000727	MTREX	89	80.468	Echinops_telfairi
ENSMMUG00000010379	MTREX	99	74.568	ENSEBUG00000012869	mtrex	99	74.568	Eptatretus_burgeri
ENSMMUG00000010379	MTREX	100	96.648	ENSEASG00005013270	MTREX	100	96.648	Equus_asinus_asinus
ENSMMUG00000010379	MTREX	100	96.743	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSMMUG00000010379	MTREX	98	88.293	ENSEEUG00000000527	MTREX	100	88.293	Erinaceus_europaeus
ENSMMUG00000010379	MTREX	98	84.981	ENSELUG00000004898	mtrex	100	89.391	Esox_lucius
ENSMMUG00000010379	MTREX	100	96.935	ENSFCAG00000010575	MTREX	100	96.935	Felis_catus
ENSMMUG00000010379	MTREX	100	89.655	ENSFALG00000010850	MTREX	100	89.464	Ficedula_albicollis
ENSMMUG00000010379	MTREX	100	96.839	ENSFDAG00000011199	MTREX	100	96.839	Fukomys_damarensis
ENSMMUG00000010379	MTREX	100	83.825	ENSFHEG00000023014	mtrex	100	82.543	Fundulus_heteroclitus
ENSMMUG00000010379	MTREX	100	79.143	ENSGMOG00000014702	mtrex	100	79.429	Gadus_morhua
ENSMMUG00000010379	MTREX	100	90.421	ENSGALG00000014709	MTREX	86	90.421	Gallus_gallus
ENSMMUG00000010379	MTREX	100	83.555	ENSGAFG00000012425	mtrex	99	86.018	Gambusia_affinis
ENSMMUG00000010379	MTREX	100	78.538	ENSGACG00000016260	mtrex	96	85.109	Gasterosteus_aculeatus
ENSMMUG00000010379	MTREX	100	90.028	ENSGAGG00000020036	MTREX	100	90.613	Gopherus_agassizii
ENSMMUG00000010379	MTREX	100	97.989	ENSGGOG00000001867	MTREX	100	97.989	Gorilla_gorilla
ENSMMUG00000010379	MTREX	100	82.762	ENSHBUG00000006229	mtrex	100	82.857	Haplochromis_burtoni
ENSMMUG00000010379	MTREX	100	96.839	ENSHGLG00000019445	SKIV2L2	100	96.839	Heterocephalus_glaber_female
ENSMMUG00000010379	MTREX	100	96.839	ENSHGLG00100011833	SKIV2L2	100	96.839	Heterocephalus_glaber_male
ENSMMUG00000010379	MTREX	91	84.827	ENSHCOG00000019995	mtrex	100	84.827	Hippocampus_comes
ENSMMUG00000010379	MTREX	100	84.557	ENSIPUG00000024348	skiv2l2	100	84.186	Ictalurus_punctatus
ENSMMUG00000010379	MTREX	100	97.222	ENSSTOG00000010802	MTREX	100	97.222	Ictidomys_tridecemlineatus
ENSMMUG00000010379	MTREX	100	89.464	ENSJJAG00000020975	Mtrex	100	90.134	Jaculus_jaculus
ENSMMUG00000010379	MTREX	100	82.493	ENSKMAG00000012642	mtrex	100	82.745	Kryptolebias_marmoratus
ENSMMUG00000010379	MTREX	100	83.175	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSMMUG00000010379	MTREX	100	87.835	ENSLACG00000009075	MTREX	100	87.644	Latimeria_chalumnae
ENSMMUG00000010379	MTREX	100	86.902	ENSLOCG00000010186	mtrex	100	86.616	Lepisosteus_oculatus
ENSMMUG00000010379	MTREX	98	96.004	ENSLAFG00000010497	MTREX	100	94.444	Loxodonta_africana
ENSMMUG00000010379	MTREX	100	99.905	ENSMFAG00000031610	MTREX	100	99.905	Macaca_fascicularis
ENSMMUG00000010379	MTREX	100	99.905	ENSMNEG00000032746	MTREX	100	99.905	Macaca_nemestrina
ENSMMUG00000010379	MTREX	100	98.372	ENSMLEG00000041051	MTREX	100	98.372	Mandrillus_leucophaeus
ENSMMUG00000010379	MTREX	94	86.992	ENSMAMG00000016753	mtrex	96	88.309	Mastacembelus_armatus
ENSMMUG00000010379	MTREX	100	82.762	ENSMZEG00005000414	mtrex	100	82.857	Maylandia_zebra
ENSMMUG00000010379	MTREX	94	67.376	ENSMGAG00000003980	MTREX	99	67.376	Meleagris_gallopavo
ENSMMUG00000010379	MTREX	100	95.690	ENSMAUG00000010727	Mtrex	100	96.552	Mesocricetus_auratus
ENSMMUG00000010379	MTREX	100	97.605	ENSMICG00000012779	MTREX	100	97.605	Microcebus_murinus
ENSMMUG00000010379	MTREX	100	96.552	ENSMOCG00000019886	Mtrex	100	96.552	Microtus_ochrogaster
ENSMMUG00000010379	MTREX	100	81.333	ENSMMOG00000002476	mtrex	96	87.383	Mola_mola
ENSMMUG00000010379	MTREX	100	91.762	ENSMODG00000019494	MTREX	100	92.146	Monodelphis_domestica
ENSMMUG00000010379	MTREX	100	74.163	ENSMALG00000002917	mtrex	99	82.395	Monopterus_albus
ENSMMUG00000010379	MTREX	100	96.073	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.073	Mus_caroli
ENSMMUG00000010379	MTREX	100	96.264	ENSMUSG00000016018	Mtrex	100	96.264	Mus_musculus
ENSMMUG00000010379	MTREX	100	96.073	MGP_PahariEiJ_G0015967	Mtrex	100	96.073	Mus_pahari
ENSMMUG00000010379	MTREX	100	96.264	MGP_SPRETEiJ_G0019775	Mtrex	100	96.264	Mus_spretus
ENSMMUG00000010379	MTREX	100	97.222	ENSMPUG00000007619	MTREX	100	97.222	Mustela_putorius_furo
ENSMMUG00000010379	MTREX	100	95.606	ENSMLUG00000001152	MTREX	100	95.511	Myotis_lucifugus
ENSMMUG00000010379	MTREX	100	97.031	ENSNGAG00000011938	Mtrex	100	97.031	Nannospalax_galili
ENSMMUG00000010379	MTREX	100	82.667	ENSNBRG00000011293	mtrex	100	82.762	Neolamprologus_brichardi
ENSMMUG00000010379	MTREX	100	93.881	ENSNLEG00000001494	MTREX	100	93.881	Nomascus_leucogenys
ENSMMUG00000010379	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSMMUG00000010379	MTREX	100	81.513	ENSOPRG00000008009	MTREX	100	81.513	Ochotona_princeps
ENSMMUG00000010379	MTREX	100	96.264	ENSODEG00000017234	MTREX	100	96.264	Octodon_degus
ENSMMUG00000010379	MTREX	100	82.476	ENSONIG00000007587	mtrex	100	82.571	Oreochromis_niloticus
ENSMMUG00000010379	MTREX	100	97.031	ENSOCUG00000004463	MTREX	100	97.031	Oryctolagus_cuniculus
ENSMMUG00000010379	MTREX	100	82.716	ENSORLG00000005443	mtrex	100	82.526	Oryzias_latipes
ENSMMUG00000010379	MTREX	100	82.621	ENSORLG00020006329	mtrex	100	82.431	Oryzias_latipes_hni
ENSMMUG00000010379	MTREX	100	82.493	ENSORLG00015012924	mtrex	100	82.431	Oryzias_latipes_hsok
ENSMMUG00000010379	MTREX	100	81.784	ENSOMEG00000008825	mtrex	100	81.671	Oryzias_melastigma
ENSMMUG00000010379	MTREX	100	97.318	ENSOGAG00000002886	MTREX	100	97.318	Otolemur_garnettii
ENSMMUG00000010379	MTREX	100	96.562	ENSOARG00000007764	MTREX	100	96.562	Ovis_aries
ENSMMUG00000010379	MTREX	100	97.989	ENSPPAG00000039291	MTREX	100	97.989	Pan_paniscus
ENSMMUG00000010379	MTREX	100	96.935	ENSPPRG00000019701	MTREX	100	96.935	Panthera_pardus
ENSMMUG00000010379	MTREX	100	95.402	ENSPTIG00000009313	MTREX	100	95.402	Panthera_tigris_altaica
ENSMMUG00000010379	MTREX	100	97.989	ENSPTRG00000016878	MTREX	100	97.989	Pan_troglodytes
ENSMMUG00000010379	MTREX	100	99.810	ENSPANG00000009697	MTREX	100	99.810	Papio_anubis
ENSMMUG00000010379	MTREX	100	86.654	ENSPKIG00000020833	mtrex	98	88.671	Paramormyrops_kingsleyae
ENSMMUG00000010379	MTREX	100	91.092	ENSPSIG00000012150	MTREX	100	91.092	Pelodiscus_sinensis
ENSMMUG00000010379	MTREX	100	80.780	ENSPMGG00000002582	mtrex	100	80.685	Periophthalmus_magnuspinnatus
ENSMMUG00000010379	MTREX	95	65.261	ENSPMAG00000009668	mtrex	100	65.161	Petromyzon_marinus
ENSMMUG00000010379	MTREX	91	96.621	ENSPCIG00000024730	MTREX	100	96.621	Phascolarctos_cinereus
ENSMMUG00000010379	MTREX	75	87.072	ENSPFOG00000003141	mtrex	100	87.310	Poecilia_formosa
ENSMMUG00000010379	MTREX	100	83.699	ENSPLAG00000021311	mtrex	100	83.270	Poecilia_latipinna
ENSMMUG00000010379	MTREX	91	87.723	ENSPMEG00000010597	mtrex	99	87.723	Poecilia_mexicana
ENSMMUG00000010379	MTREX	100	83.159	ENSPREG00000003089	mtrex	100	83.080	Poecilia_reticulata
ENSMMUG00000010379	MTREX	98	99.223	ENSPPYG00000015469	MTREX	98	99.223	Pongo_abelii
ENSMMUG00000010379	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSMMUG00000010379	MTREX	99	91.186	ENSPCOG00000018092	MTREX	100	91.186	Propithecus_coquereli
ENSMMUG00000010379	MTREX	100	97.222	ENSPVAG00000002445	MTREX	100	97.222	Pteropus_vampyrus
ENSMMUG00000010379	MTREX	100	82.667	ENSPNYG00000006164	mtrex	100	82.762	Pundamilia_nyererei
ENSMMUG00000010379	MTREX	100	85.605	ENSPNAG00000008794	mtrex	100	85.605	Pygocentrus_nattereri
ENSMMUG00000010379	MTREX	98	97.463	ENSRNOG00000010125	Mtrex	96	97.463	Rattus_norvegicus
ENSMMUG00000010379	MTREX	100	98.002	ENSRBIG00000034930	MTREX	100	98.002	Rhinopithecus_bieti
ENSMMUG00000010379	MTREX	100	98.276	ENSRROG00000039895	MTREX	100	98.276	Rhinopithecus_roxellana
ENSMMUG00000010379	MTREX	89	55.556	YJL050W	MTR4	89	55.556	Saccharomyces_cerevisiae
ENSMMUG00000010379	MTREX	100	97.318	ENSSBOG00000026693	MTREX	100	97.318	Saimiri_boliviensis_boliviensis
ENSMMUG00000010379	MTREX	94	95.710	ENSSHAG00000004600	MTREX	98	95.710	Sarcophilus_harrisii
ENSMMUG00000010379	MTREX	100	86.749	ENSSFOG00015014355	skiv2l2	100	86.737	Scleropages_formosus
ENSMMUG00000010379	MTREX	100	82.778	ENSSMAG00000007572	mtrex	100	83.143	Scophthalmus_maximus
ENSMMUG00000010379	MTREX	100	83.714	ENSSDUG00000023789	mtrex	100	83.714	Seriola_dumerili
ENSMMUG00000010379	MTREX	100	83.619	ENSSLDG00000006301	mtrex	100	83.619	Seriola_lalandi_dorsalis
ENSMMUG00000010379	MTREX	100	94.253	ENSSARG00000008387	MTREX	100	94.253	Sorex_araneus
ENSMMUG00000010379	MTREX	100	76.960	ENSSPUG00000007071	MTREX	100	77.247	Sphenodon_punctatus
ENSMMUG00000010379	MTREX	91	87.303	ENSSPAG00000011319	mtrex	94	87.723	Stegastes_partitus
ENSMMUG00000010379	MTREX	100	97.222	ENSSSCG00000016911	MTREX	100	97.222	Sus_scrofa
ENSMMUG00000010379	MTREX	100	89.187	ENSTGUG00000002480	MTREX	100	88.985	Taeniopygia_guttata
ENSMMUG00000010379	MTREX	100	82.605	ENSTRUG00000014571	mtrex	100	82.571	Takifugu_rubripes
ENSMMUG00000010379	MTREX	100	81.034	ENSTBEG00000007769	MTREX	100	81.034	Tupaia_belangeri
ENSMMUG00000010379	MTREX	100	96.648	ENSTTRG00000008678	MTREX	100	96.648	Tursiops_truncatus
ENSMMUG00000010379	MTREX	100	97.031	ENSUAMG00000023061	MTREX	100	97.031	Ursus_americanus
ENSMMUG00000010379	MTREX	100	96.367	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSMMUG00000010379	MTREX	100	86.015	ENSVPAG00000011174	MTREX	100	86.015	Vicugna_pacos
ENSMMUG00000010379	MTREX	100	97.222	ENSVVUG00000021337	MTREX	100	97.222	Vulpes_vulpes
ENSMMUG00000010379	MTREX	100	88.134	ENSXETG00000032798	MTREX	100	88.134	Xenopus_tropicalis
ENSMMUG00000010379	MTREX	100	83.159	ENSXMAG00000004799	mtrex	97	87.370	Xiphophorus_maculatus