EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000010509 (Gene tree)
Gene ID: 715202
Gene Symbol: CLTC
Alias: CLTCL2|Hc
Full Name: DEAH-box helicase 40
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 132071 bases
Position: chr16:53055430-53187500
Accession: 715202
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000029032	HA2	PF04408.23	5.3e-15	1	1
ENSMMUP00000056740	HA2	PF04408.23	3.3e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000031016	CLTC-202	2085	XM_015119975	ENSMMUP00000029032	694 (aa)	XP_014975461	F7HRA7
ENSMMUT00000007647	CLTC-204	4965	-	ENSMMUP00000007183	1654 (aa)	-	F7GQ74
ENSMMUT00000075775	CLTC-201	7068	-	ENSMMUP00000056740	2219 (aa)	-	A0A1D5R8V0
ENSMMUT00000066668	CLTC-206	294	-	ENSMMUP00000052896	97 (aa)	-	A0A1D5QXW6
ENSMMUT00000060703	CLTC-205	1839	-	ENSMMUP00000057792	612 (aa)	-	A0A1D5RBV0
ENSMMUT00000014704	CLTC-203	6457	XM_015119980	ENSMMUP00000013774	1675 (aa)	XP_014975466	F7B8E8
ENSMMUT00000067675	CLTC-207	885	-	ENSMMUP00000056230	294 (aa)	-	A0A1D5R7E1

Gene Model

Click here to download ENSMMUG00000010509's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc04142	Lysosome	KEGG
mcc04144	Endocytosis	KEGG
mcc04721	Synaptic vesicle cycle	KEGG
mcc04961	Endocrine and other factor-regulated calcium reabsorption	KEGG
mcc05016	Huntington disease	KEGG
mcc05100	Bacterial invasion of epithelial cells	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000010509's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000010509	CLTC	78	38.854	ENSMMUG00000017902	DHX37	52	40.609
ENSMMUG00000010509	CLTC	81	34.737	ENSMMUG00000006594	DHX33	78	36.986
ENSMMUG00000010509	CLTC	81	37.143	ENSMMUG00000011347	DHX36	53	44.604
ENSMMUG00000010509	CLTC	81	39.860	ENSMMUG00000019960	DHX16	92	39.162
ENSMMUG00000010509	CLTC	81	39.616	ENSMMUG00000009637	DHX15	68	42.032
ENSMMUG00000010509	CLTC	88	33.226	ENSMMUG00000003385	DHX35	81	37.413

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000010509	CLTC	86	99.842	ENSOCUG00000016413	CLTC	100	99.842	Oryctolagus_cuniculus