EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000011496 (Gene tree)
Gene ID: 709260
Gene Symbol: SBNO1
Alias: FLJ10701|FLJ10833|MOP3|Sno
Full Name: strawberry notch homolog 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 81790 bases
Position: chr11:123300843-123382632
Accession: 709260
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000015087	ResIII	PF04851.15	1.3e-07	1	1
ENSMMUP00000057999	ResIII	PF04851.15	1.3e-07	1	1
ENSMMUP00000043771	ResIII	PF04851.15	1.6e-07	1	1
ENSMMUP00000038437	ResIII	PF04851.15	1.7e-07	1	1
ENSMMUP00000050849	ResIII	PF04851.15	1.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000057449	SBNO1-204	4092	-	ENSMMUP00000050849	1363 (aa)	-	A0A1D5QS21
ENSMMUT00000055817	SBNO1-205	3831	-	ENSMMUP00000043771	1276 (aa)	-	A0A1D5Q6V5
ENSMMUT00000045409	SBNO1-203	4200	-	ENSMMUP00000038437	1399 (aa)	-	F7GKN4
ENSMMUT00000016098	SBNO1-202	4316	XM_015109612	ENSMMUP00000015087	1392 (aa)	XP_014965098	I0FT20
ENSMMUT00000059710	SBNO1-201	5582	XM_015109611	ENSMMUP00000057999	1393 (aa)	XP_014965097	G7N694

Gene Model

Click here to download ENSMMUG00000011496's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000011496's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000011496	SBNO1	82	57.411	ENSMMUG00000010886	SBNO2	72	66.968

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000011496	SBNO1	100	99.569	ENSG00000139697	SBNO1	100	99.569	Homo_sapiens
ENSMMUG00000011496	SBNO1	85	79.641	ENSAPOG00000003196	sbno1	98	81.255	Acanthochromis_polyacanthus
ENSMMUG00000011496	SBNO1	100	97.851	ENSAMEG00000015151	SBNO1	100	97.851	Ailuropoda_melanoleuca
ENSMMUG00000011496	SBNO1	99	78.993	ENSACIG00000008088	sbno1	95	78.993	Amphilophus_citrinellus
ENSMMUG00000011496	SBNO1	99	79.329	ENSAOCG00000014859	sbno1	99	75.264	Amphiprion_ocellaris
ENSMMUG00000011496	SBNO1	99	79.329	ENSAPEG00000006069	sbno1	99	75.264	Amphiprion_percula
ENSMMUG00000011496	SBNO1	99	81.429	ENSATEG00000006667	sbno1	95	81.429	Anabas_testudineus
ENSMMUG00000011496	SBNO1	100	92.098	ENSAPLG00000015674	SBNO1	100	92.319	Anas_platyrhynchos
ENSMMUG00000011496	SBNO1	100	90.071	ENSACAG00000015441	SBNO1	88	88.099	Anolis_carolinensis
ENSMMUG00000011496	SBNO1	100	98.636	ENSANAG00000029958	-	100	98.636	Aotus_nancymaae
ENSMMUG00000011496	SBNO1	99	74.909	ENSACLG00000024913	sbno1	99	75.146	Astatotilapia_calliptera
ENSMMUG00000011496	SBNO1	99	83.601	ENSAMXG00000019473	sbno1	95	83.601	Astyanax_mexicanus
ENSMMUG00000011496	SBNO1	99	97.989	ENSBTAG00000020505	SBNO1	99	97.989	Bos_taurus
ENSMMUG00000011496	SBNO1	100	98.780	ENSCJAG00000016599	SBNO1	100	98.780	Callithrix_jacchus
ENSMMUG00000011496	SBNO1	100	97.993	ENSCAFG00000007503	SBNO1	100	97.993	Canis_familiaris
ENSMMUG00000011496	SBNO1	100	97.272	ENSCAFG00020015363	SBNO1	100	97.272	Canis_lupus_dingo
ENSMMUG00000011496	SBNO1	99	97.843	ENSCHIG00000008382	SBNO1	99	97.843	Capra_hircus
ENSMMUG00000011496	SBNO1	100	98.349	ENSTSYG00000012749	SBNO1	100	98.349	Carlito_syrichta
ENSMMUG00000011496	SBNO1	96	97.370	ENSCAPG00000000384	SBNO1	100	97.370	Cavia_aperea
ENSMMUG00000011496	SBNO1	100	96.767	ENSCPOG00000008109	SBNO1	100	98.221	Cavia_porcellus
ENSMMUG00000011496	SBNO1	100	94.405	ENSCCAG00000035316	SBNO1	100	95.504	Cebus_capucinus
ENSMMUG00000011496	SBNO1	99	97.840	ENSCATG00000008239	SBNO1	99	99.320	Cercocebus_atys
ENSMMUG00000011496	SBNO1	100	96.913	ENSCLAG00000008995	SBNO1	100	98.221	Chinchilla_lanigera
ENSMMUG00000011496	SBNO1	83	99.827	ENSCSAG00000002064	SBNO1	100	99.827	Chlorocebus_sabaeus
ENSMMUG00000011496	SBNO1	95	98.049	ENSCHOG00000008814	SBNO1	96	94.418	Choloepus_hoffmanni
ENSMMUG00000011496	SBNO1	100	92.319	ENSCPBG00000025968	SBNO1	99	92.319	Chrysemys_picta_bellii
ENSMMUG00000011496	SBNO1	100	94.337	ENSCANG00000042688	-	100	94.337	Colobus_angolensis_palliatus
ENSMMUG00000011496	SBNO1	100	97.272	ENSCGRG00001017470	Sbno1	100	97.509	Cricetulus_griseus_chok1gshd
ENSMMUG00000011496	SBNO1	100	97.272	ENSCGRG00000004756	Sbno1	100	97.509	Cricetulus_griseus_crigri
ENSMMUG00000011496	SBNO1	99	79.396	ENSCSEG00000011919	sbno1	96	79.152	Cynoglossus_semilaevis
ENSMMUG00000011496	SBNO1	99	80.107	ENSCVAG00000007038	sbno1	95	80.107	Cyprinodon_variegatus
ENSMMUG00000011496	SBNO1	99	83.005	ENSDARG00000099080	sbno1	99	79.515	Danio_rerio
ENSMMUG00000011496	SBNO1	100	96.857	ENSDNOG00000017147	SBNO1	98	97.739	Dasypus_novemcinctus
ENSMMUG00000011496	SBNO1	100	93.662	ENSDORG00000015261	Sbno1	99	97.207	Dipodomys_ordii
ENSMMUG00000011496	SBNO1	92	100.000	ENSETEG00000005620	SBNO1	88	98.582	Echinops_telfairi
ENSMMUG00000011496	SBNO1	71	86.802	ENSEBUG00000013823	sbno1	85	86.802	Eptatretus_burgeri
ENSMMUG00000011496	SBNO1	54	95.906	ENSEASG00005012595	-	92	98.220	Equus_asinus_asinus
ENSMMUG00000011496	SBNO1	100	98.349	ENSECAG00000006127	SBNO1	100	98.349	Equus_caballus
ENSMMUG00000011496	SBNO1	83	98.352	ENSEEUG00000003793	SBNO1	83	98.352	Erinaceus_europaeus
ENSMMUG00000011496	SBNO1	99	83.601	ENSELUG00000002886	sbno1	95	83.601	Esox_lucius
ENSMMUG00000011496	SBNO1	99	98.276	ENSFCAG00000015331	SBNO1	99	98.276	Felis_catus
ENSMMUG00000011496	SBNO1	100	92.098	ENSFALG00000009273	SBNO1	100	92.391	Ficedula_albicollis
ENSMMUG00000011496	SBNO1	99	95.327	ENSFDAG00000014232	SBNO1	99	95.327	Fukomys_damarensis
ENSMMUG00000011496	SBNO1	99	80.284	ENSFHEG00000007360	sbno1	95	80.284	Fundulus_heteroclitus
ENSMMUG00000011496	SBNO1	96	81.125	ENSGMOG00000018229	sbno1	99	78.659	Gadus_morhua
ENSMMUG00000011496	SBNO1	87	96.701	ENSGALG00000003392	SBNO1	99	92.364	Gallus_gallus
ENSMMUG00000011496	SBNO1	99	80.639	ENSGAFG00000003960	sbno1	95	80.639	Gambusia_affinis
ENSMMUG00000011496	SBNO1	96	81.047	ENSGACG00000015633	sbno1	99	78.642	Gasterosteus_aculeatus
ENSMMUG00000011496	SBNO1	100	91.529	ENSGAGG00000001065	SBNO1	100	91.529	Gopherus_agassizii
ENSMMUG00000011496	SBNO1	100	99.497	ENSGGOG00000015000	SBNO1	100	99.497	Gorilla_gorilla
ENSMMUG00000011496	SBNO1	99	69.119	ENSHBUG00000011910	sbno1	99	69.376	Haplochromis_burtoni
ENSMMUG00000011496	SBNO1	100	97.057	ENSHGLG00000014165	-	100	97.057	Heterocephalus_glaber_female
ENSMMUG00000011496	SBNO1	93	84.676	ENSHCOG00000003246	sbno1	95	84.676	Hippocampus_comes
ENSMMUG00000011496	SBNO1	99	82.562	ENSIPUG00000015830	Sbno1	94	88.978	Ictalurus_punctatus
ENSMMUG00000011496	SBNO1	100	98.204	ENSSTOG00000023221	SBNO1	100	98.577	Ictidomys_tridecemlineatus
ENSMMUG00000011496	SBNO1	100	97.487	ENSJJAG00000001741	Sbno1	100	97.487	Jaculus_jaculus
ENSMMUG00000011496	SBNO1	99	80.893	ENSKMAG00000009696	sbno1	95	81.329	Kryptolebias_marmoratus
ENSMMUG00000011496	SBNO1	99	81.883	ENSLBEG00000007623	sbno1	95	81.883	Labrus_bergylta
ENSMMUG00000011496	SBNO1	99	80.986	ENSLACG00000017227	SBNO1	99	90.625	Latimeria_chalumnae
ENSMMUG00000011496	SBNO1	99	85.231	ENSLOCG00000005725	sbno1	95	85.231	Lepisosteus_oculatus
ENSMMUG00000011496	SBNO1	100	96.913	ENSLAFG00000002135	SBNO1	100	96.913	Loxodonta_africana
ENSMMUG00000011496	SBNO1	100	100.000	ENSMFAG00000031429	SBNO1	100	100.000	Macaca_fascicularis
ENSMMUG00000011496	SBNO1	100	97.990	ENSMLEG00000033260	SBNO1	100	99.110	Mandrillus_leucophaeus
ENSMMUG00000011496	SBNO1	99	81.607	ENSMAMG00000005473	sbno1	95	81.607	Mastacembelus_armatus
ENSMMUG00000011496	SBNO1	100	92.241	ENSMGAG00000003274	SBNO1	100	92.534	Meleagris_gallopavo
ENSMMUG00000011496	SBNO1	52	97.277	ENSMAUG00000004834	-	100	96.833	Mesocricetus_auratus
ENSMMUG00000011496	SBNO1	100	96.985	ENSMICG00000006573	-	100	96.985	Microcebus_murinus
ENSMMUG00000011496	SBNO1	100	95.455	ENSMOCG00000009390	Sbno1	100	97.687	Microtus_ochrogaster
ENSMMUG00000011496	SBNO1	99	80.565	ENSMMOG00000008691	sbno1	94	80.565	Mola_mola
ENSMMUG00000011496	SBNO1	99	94.899	ENSMODG00000012470	SBNO1	98	95.187	Monodelphis_domestica
ENSMMUG00000011496	SBNO1	99	79.574	ENSMALG00000001056	sbno1	95	79.574	Monopterus_albus
ENSMMUG00000011496	SBNO1	99	97.126	MGP_CAROLIEiJ_G0027749	Sbno1	100	97.134	Mus_caroli
ENSMMUG00000011496	SBNO1	99	97.486	ENSMUSG00000038095	Sbno1	100	97.134	Mus_musculus
ENSMMUG00000011496	SBNO1	99	97.414	MGP_PahariEiJ_G0024329	Sbno1	100	96.833	Mus_pahari
ENSMMUG00000011496	SBNO1	99	97.270	MGP_SPRETEiJ_G0028747	Sbno1	100	97.134	Mus_spretus
ENSMMUG00000011496	SBNO1	100	98.134	ENSMPUG00000001658	SBNO1	100	98.134	Mustela_putorius_furo
ENSMMUG00000011496	SBNO1	100	97.631	ENSMLUG00000017159	SBNO1	100	97.631	Myotis_lucifugus
ENSMMUG00000011496	SBNO1	100	98.134	ENSNGAG00000012620	Sbno1	100	98.134	Nannospalax_galili
ENSMMUG00000011496	SBNO1	99	75.000	ENSNBRG00000019189	sbno1	99	75.237	Neolamprologus_brichardi
ENSMMUG00000011496	SBNO1	100	95.833	ENSNLEG00000001502	SBNO1	100	95.833	Nomascus_leucogenys
ENSMMUG00000011496	SBNO1	60	96.774	ENSMEUG00000008768	-	93	89.873	Notamacropus_eugenii
ENSMMUG00000011496	SBNO1	100	94.405	ENSOPRG00000011054	SBNO1	100	94.333	Ochotona_princeps
ENSMMUG00000011496	SBNO1	100	97.055	ENSODEG00000009997	SBNO1	100	98.221	Octodon_degus
ENSMMUG00000011496	SBNO1	99	80.357	ENSONIG00000015348	sbno1	95	80.357	Oreochromis_niloticus
ENSMMUG00000011496	SBNO1	98	96.131	ENSOCUG00000002441	SBNO1	95	96.131	Oryctolagus_cuniculus
ENSMMUG00000011496	SBNO1	99	79.643	ENSORLG00000001593	sbno1	95	79.643	Oryzias_latipes
ENSMMUG00000011496	SBNO1	99	79.643	ENSORLG00020015216	sbno1	95	79.643	Oryzias_latipes_hni
ENSMMUG00000011496	SBNO1	99	79.821	ENSORLG00015002726	sbno1	95	79.821	Oryzias_latipes_hsok
ENSMMUG00000011496	SBNO1	99	80.072	ENSOMEG00000019313	sbno1	99	74.982	Oryzias_melastigma
ENSMMUG00000011496	SBNO1	52	94.251	ENSOGAG00000010781	-	100	94.127	Otolemur_garnettii
ENSMMUG00000011496	SBNO1	99	97.631	ENSOARG00000004404	SBNO1	99	97.631	Ovis_aries
ENSMMUG00000011496	SBNO1	100	99.426	ENSPPAG00000024635	SBNO1	100	99.426	Pan_paniscus
ENSMMUG00000011496	SBNO1	99	98.276	ENSPPRG00000022092	SBNO1	99	98.276	Panthera_pardus
ENSMMUG00000011496	SBNO1	100	97.990	ENSPTIG00000017803	SBNO1	100	97.990	Panthera_tigris_altaica
ENSMMUG00000011496	SBNO1	100	99.497	ENSPTRG00000005597	SBNO1	100	99.497	Pan_troglodytes
ENSMMUG00000011496	SBNO1	100	99.784	ENSPANG00000011640	SBNO1	100	99.784	Papio_anubis
ENSMMUG00000011496	SBNO1	99	82.531	ENSPKIG00000001441	sbno1	99	80.443	Paramormyrops_kingsleyae
ENSMMUG00000011496	SBNO1	91	90.090	ENSPSIG00000009256	-	100	87.714	Pelodiscus_sinensis
ENSMMUG00000011496	SBNO1	100	91.429	ENSPSIG00000009572	-	100	91.345	Pelodiscus_sinensis
ENSMMUG00000011496	SBNO1	100	96.913	ENSPEMG00000016087	Sbno1	100	97.331	Peromyscus_maniculatus_bairdii
ENSMMUG00000011496	SBNO1	99	94.329	ENSPCIG00000010985	SBNO1	99	94.831	Phascolarctos_cinereus
ENSMMUG00000011496	SBNO1	99	80.462	ENSPFOG00000005069	sbno1	95	80.462	Poecilia_formosa
ENSMMUG00000011496	SBNO1	99	80.462	ENSPLAG00000015015	sbno1	95	80.462	Poecilia_latipinna
ENSMMUG00000011496	SBNO1	99	80.462	ENSPMEG00000021212	sbno1	95	80.462	Poecilia_mexicana
ENSMMUG00000011496	SBNO1	99	80.107	ENSPREG00000017746	sbno1	95	80.107	Poecilia_reticulata
ENSMMUG00000011496	SBNO1	100	99.210	ENSPPYG00000005084	SBNO1	100	99.210	Pongo_abelii
ENSMMUG00000011496	SBNO1	89	92.181	ENSPCAG00000008634	SBNO1	88	92.149	Procavia_capensis
ENSMMUG00000011496	SBNO1	100	98.062	ENSPCOG00000024277	SBNO1	99	99.273	Propithecus_coquereli
ENSMMUG00000011496	SBNO1	92	94.314	ENSPVAG00000015304	SBNO1	87	99.008	Pteropus_vampyrus
ENSMMUG00000011496	SBNO1	99	80.357	ENSPNYG00000004291	sbno1	95	80.357	Pundamilia_nyererei
ENSMMUG00000011496	SBNO1	99	83.808	ENSPNAG00000015622	sbno1	95	83.808	Pygocentrus_nattereri
ENSMMUG00000011496	SBNO1	99	97.270	ENSRNOG00000001064	Sbno1	99	98.396	Rattus_norvegicus
ENSMMUG00000011496	SBNO1	100	99.785	ENSRROG00000034230	SBNO1	100	99.785	Rhinopithecus_roxellana
ENSMMUG00000011496	SBNO1	96	93.676	ENSSBOG00000015422	SBNO1	100	93.676	Saimiri_boliviensis_boliviensis
ENSMMUG00000011496	SBNO1	99	82.888	ENSSFOG00015019025	sbno1	99	80.286	Scleropages_formosus
ENSMMUG00000011496	SBNO1	99	79.751	ENSSMAG00000013640	sbno1	99	76.110	Scophthalmus_maximus
ENSMMUG00000011496	SBNO1	99	81.250	ENSSDUG00000023480	sbno1	95	81.250	Seriola_dumerili
ENSMMUG00000011496	SBNO1	99	81.250	ENSSLDG00000007928	sbno1	95	81.250	Seriola_lalandi_dorsalis
ENSMMUG00000011496	SBNO1	89	98.058	ENSSARG00000002594	SBNO1	89	98.058	Sorex_araneus
ENSMMUG00000011496	SBNO1	100	89.883	ENSSPUG00000012640	SBNO1	100	90.103	Sphenodon_punctatus
ENSMMUG00000011496	SBNO1	99	79.751	ENSSPAG00000016244	sbno1	95	79.751	Stegastes_partitus
ENSMMUG00000011496	SBNO1	100	98.205	ENSSSCG00000009776	SBNO1	100	98.205	Sus_scrofa
ENSMMUG00000011496	SBNO1	100	92.026	ENSTGUG00000005380	SBNO1	100	92.319	Taeniopygia_guttata
ENSMMUG00000011496	SBNO1	99	81.408	ENSTRUG00000018490	sbno1	95	81.408	Takifugu_rubripes
ENSMMUG00000011496	SBNO1	56	70.900	ENSTNIG00000013506	sbno1	99	71.871	Tetraodon_nigroviridis
ENSMMUG00000011496	SBNO1	100	98.277	ENSUAMG00000019671	SBNO1	100	98.277	Ursus_americanus
ENSMMUG00000011496	SBNO1	100	98.277	ENSUMAG00000004002	SBNO1	100	98.277	Ursus_maritimus
ENSMMUG00000011496	SBNO1	95	93.478	ENSVPAG00000007024	SBNO1	95	93.478	Vicugna_pacos
ENSMMUG00000011496	SBNO1	100	98.134	ENSVVUG00000027807	SBNO1	100	98.134	Vulpes_vulpes
ENSMMUG00000011496	SBNO1	99	88.889	ENSXETG00000031930	SBNO1	95	88.889	Xenopus_tropicalis
ENSMMUG00000011496	SBNO1	86	85.827	ENSXCOG00000011607	sbno1	90	85.602	Xiphophorus_couchianus
ENSMMUG00000011496	SBNO1	99	80.107	ENSXMAG00000002140	sbno1	95	80.107	Xiphophorus_maculatus