EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000011682 (Gene tree)
Gene ID: 100426750
Gene Symbol: RPP21
Alias: -
Full Name: E3 ubiquitin-protein ligase TRIM39
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 19646 bases
Position: chr4:31050535-31070180
Accession: 100426750
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000015333	Rpr2	PF04032.16	6.6e-16	1	1
ENSMMUP00000015336	Rpr2	PF04032.16	2.4e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000041158	-	4176	-	ENSMMUP00000034192	483 (aa)	-	F7BHG6
ENSMMUT00000016363	-	513	XM_015135855	ENSMMUP00000015333	170 (aa)	XP_014991341	F7HEN9
ENSMMUT00000016367	-	4889	XM_015135874	ENSMMUP00000015337	488 (aa)	XP_014991360	F7HEN1
ENSMMUT00000016366	-	1512	-	ENSMMUP00000015336	503 (aa)	-	F7HEN3
ENSMMUT00000041156	-	1536	-	ENSMMUP00000034191	511 (aa)	-	F7BHH4

Gene Model

Click here to download ENSMMUG00000011682's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03013	RNA transport	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000011682's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000011682	RPP21	100	98.608	ENSANAG00000032075	TRIM39	100	98.608	Aotus_nancymaae
ENSMMUG00000011682	RPP21	100	98.012	ENSCJAG00000020681	TRIM39	100	98.012	Callithrix_jacchus
ENSMMUG00000011682	RPP21	100	98.410	ENSCCAG00000036784	TRIM39	100	98.410	Cebus_capucinus
ENSMMUG00000011682	RPP21	100	99.801	ENSCATG00000044044	TRIM39	100	99.801	Cercocebus_atys
ENSMMUG00000011682	RPP21	100	98.807	ENSGGOG00000016403	TRIM39	100	98.807	Gorilla_gorilla
ENSMMUG00000011682	RPP21	100	100.000	ENSMFAG00000046182	TRIM39	100	100.000	Macaca_fascicularis
ENSMMUG00000011682	RPP21	100	99.801	ENSMNEG00000034999	TRIM39	100	99.801	Macaca_nemestrina
ENSMMUG00000011682	RPP21	100	100.000	ENSMLEG00000034263	TRIM39	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000011682	RPP21	100	98.807	ENSNLEG00000005026	TRIM39	100	98.807	Nomascus_leucogenys
ENSMMUG00000011682	RPP21	100	99.006	ENSPPAG00000040674	TRIM39	100	99.006	Pan_paniscus
ENSMMUG00000011682	RPP21	100	99.006	ENSPTRG00000017923	TRIM39	100	99.006	Pan_troglodytes
ENSMMUG00000011682	RPP21	100	99.801	ENSPANG00000000655	TRIM39	100	99.801	Papio_anubis
ENSMMUG00000011682	RPP21	100	99.801	ENSRBIG00000040889	TRIM39	100	99.801	Rhinopithecus_bieti
ENSMMUG00000011682	RPP21	100	99.801	ENSRROG00000036496	TRIM39	100	99.801	Rhinopithecus_roxellana