EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000011924 (Gene tree)
Gene ID: 714829
Gene Symbol: TNRC6C
Alias: -
Full Name: trinucleotide repeat containing 6C
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 191943 bases
Position: chr16:71729567-71921509
Accession: 714829
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000015647	Ago_hook	PF10427.9	6.1e-22	1	1
ENSMMUP00000015643	Ago_hook	PF10427.9	3.5e-21	1	1
ENSMMUP00000015643	RRM_1	PF00076.22	0.00034	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000016708	-	5922	-	ENSMMUP00000015647	1973 (aa)	-	F7HKT6
ENSMMUT00000016704	-	5070	-	ENSMMUP00000015643	1689 (aa)	-	F7HKU3

Gene Model

Click here to download ENSMMUG00000011924's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000011924's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000011924	TNRC6C	95	40.084	ENSMMUG00000021345	TNRC6B	90	54.321
ENSMMUG00000011924	TNRC6C	98	43.472	ENSMMUG00000020428	TNRC6A	98	42.808

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000011924	TNRC6C	100	98.994	ENSG00000078687	TNRC6C	100	99.073	Homo_sapiens
ENSMMUG00000011924	TNRC6C	80	54.617	ENSAPOG00000019749	tnrc6c1	98	49.365	Acanthochromis_polyacanthus
ENSMMUG00000011924	TNRC6C	100	87.643	ENSAMEG00000013756	TNRC6C	99	89.566	Ailuropoda_melanoleuca
ENSMMUG00000011924	TNRC6C	94	48.953	ENSACIG00000008075	tnrc6c1	98	54.783	Amphilophus_citrinellus
ENSMMUG00000011924	TNRC6C	77	68.960	ENSAOCG00000023968	tnrc6c1	99	49.383	Amphiprion_ocellaris
ENSMMUG00000011924	TNRC6C	80	54.334	ENSAPEG00000009020	tnrc6c1	99	49.280	Amphiprion_percula
ENSMMUG00000011924	TNRC6C	100	84.611	ENSAPLG00000005456	TNRC6C	100	86.833	Anas_platyrhynchos
ENSMMUG00000011924	TNRC6C	100	85.557	ENSACAG00000016198	TNRC6C	99	86.505	Anolis_carolinensis
ENSMMUG00000011924	TNRC6C	100	98.165	ENSANAG00000021554	TNRC6C	100	98.165	Aotus_nancymaae
ENSMMUG00000011924	TNRC6C	100	48.222	ENSACLG00000000424	tnrc6c1	99	48.813	Astatotilapia_calliptera
ENSMMUG00000011924	TNRC6C	100	87.950	ENSBTAG00000018658	TNRC6C	100	88.246	Bos_taurus
ENSMMUG00000011924	TNRC6C	100	98.105	ENSCJAG00000019431	TNRC6C	100	98.105	Callithrix_jacchus
ENSMMUG00000011924	TNRC6C	100	89.422	ENSCAFG00000005224	TNRC6C	99	91.441	Canis_familiaris
ENSMMUG00000011924	TNRC6C	100	91.171	ENSCAFG00020006661	TNRC6C	100	90.479	Canis_lupus_dingo
ENSMMUG00000011924	TNRC6C	100	87.633	ENSCHIG00000026004	TNRC6C	100	86.176	Capra_hircus
ENSMMUG00000011924	TNRC6C	100	93.576	ENSTSYG00000005403	TNRC6C	100	96.058	Carlito_syrichta
ENSMMUG00000011924	TNRC6C	100	84.882	ENSCAPG00000007307	TNRC6C	99	83.552	Cavia_aperea
ENSMMUG00000011924	TNRC6C	100	90.231	ENSCPOG00000000467	TNRC6C	100	88.676	Cavia_porcellus
ENSMMUG00000011924	TNRC6C	100	98.342	ENSCCAG00000030524	TNRC6C	100	98.377	Cebus_capucinus
ENSMMUG00000011924	TNRC6C	100	99.882	ENSCATG00000033135	TNRC6C	100	99.884	Cercocebus_atys
ENSMMUG00000011924	TNRC6C	100	93.250	ENSCLAG00000011139	TNRC6C	99	90.909	Chinchilla_lanigera
ENSMMUG00000011924	TNRC6C	98	99.793	ENSCSAG00000005167	TNRC6C	100	99.793	Chlorocebus_sabaeus
ENSMMUG00000011924	TNRC6C	75	92.051	ENSCHOG00000000088	TNRC6C	72	91.172	Choloepus_hoffmanni
ENSMMUG00000011924	TNRC6C	100	88.069	ENSCPBG00000027960	TNRC6C	100	88.069	Chrysemys_picta_bellii
ENSMMUG00000011924	TNRC6C	100	99.112	ENSCANG00000041771	TNRC6C	100	99.130	Colobus_angolensis_palliatus
ENSMMUG00000011924	TNRC6C	100	89.864	ENSCGRG00001022686	Tnrc6c	100	88.686	Cricetulus_griseus_chok1gshd
ENSMMUG00000011924	TNRC6C	100	90.290	ENSCGRG00000018041	Tnrc6c	100	88.686	Cricetulus_griseus_crigri
ENSMMUG00000011924	TNRC6C	80	53.408	ENSCSEG00000012744	tnrc6c1	98	47.389	Cynoglossus_semilaevis
ENSMMUG00000011924	TNRC6C	100	53.492	ENSDARG00000076847	tnrc6c1	99	54.339	Danio_rerio
ENSMMUG00000011924	TNRC6C	100	88.915	ENSDNOG00000003247	TNRC6C	99	89.416	Dasypus_novemcinctus
ENSMMUG00000011924	TNRC6C	100	86.051	ENSDORG00000004558	Tnrc6c	100	85.933	Dipodomys_ordii
ENSMMUG00000011924	TNRC6C	90	83.043	ENSETEG00000005527	TNRC6C	86	83.627	Echinops_telfairi
ENSMMUG00000011924	TNRC6C	100	91.183	ENSEASG00005004799	TNRC6C	100	91.243	Equus_asinus_asinus
ENSMMUG00000011924	TNRC6C	100	91.183	ENSECAG00000012486	TNRC6C	99	90.933	Equus_caballus
ENSMMUG00000011924	TNRC6C	96	91.682	ENSEEUG00000010008	TNRC6C	96	92.217	Erinaceus_europaeus
ENSMMUG00000011924	TNRC6C	100	89.250	ENSFCAG00000028358	TNRC6C	100	89.191	Felis_catus
ENSMMUG00000011924	TNRC6C	100	84.428	ENSFALG00000000848	TNRC6C	100	86.387	Ficedula_albicollis
ENSMMUG00000011924	TNRC6C	100	91.356	ENSFDAG00000010368	TNRC6C	100	90.085	Fukomys_damarensis
ENSMMUG00000011924	TNRC6C	89	70.675	ENSFHEG00000002936	tnrc6c1	99	48.390	Fundulus_heteroclitus
ENSMMUG00000011924	TNRC6C	100	88.698	ENSGALG00000001725	TNRC6C	100	88.521	Gallus_gallus
ENSMMUG00000011924	TNRC6C	100	48.868	ENSGAFG00000019019	tnrc6c1	100	49.172	Gambusia_affinis
ENSMMUG00000011924	TNRC6C	93	52.460	ENSGACG00000012320	tnrc6c1	97	47.839	Gasterosteus_aculeatus
ENSMMUG00000011924	TNRC6C	100	87.367	ENSGAGG00000022043	TNRC6C	99	87.874	Gopherus_agassizii
ENSMMUG00000011924	TNRC6C	100	98.225	ENSGGOG00000011304	TNRC6C	100	98.320	Gorilla_gorilla
ENSMMUG00000011924	TNRC6C	100	48.183	ENSHBUG00000010846	tnrc6c1	99	48.938	Haplochromis_burtoni
ENSMMUG00000011924	TNRC6C	100	92.718	ENSHGLG00000004809	TNRC6C	99	90.287	Heterocephalus_glaber_female
ENSMMUG00000011924	TNRC6C	100	91.691	ENSHGLG00100012597	TNRC6C	99	89.652	Heterocephalus_glaber_male
ENSMMUG00000011924	TNRC6C	94	54.432	ENSIPUG00000000818	tnrc6c1	98	51.813	Ictalurus_punctatus
ENSMMUG00000011924	TNRC6C	100	91.248	ENSSTOG00000009101	TNRC6C	100	89.252	Ictidomys_tridecemlineatus
ENSMMUG00000011924	TNRC6C	100	88.922	ENSJJAG00000017055	Tnrc6c	99	86.694	Jaculus_jaculus
ENSMMUG00000011924	TNRC6C	98	48.281	ENSKMAG00000021023	tnrc6c1	100	50.690	Kryptolebias_marmoratus
ENSMMUG00000011924	TNRC6C	100	75.601	ENSLACG00000015283	TNRC6C	100	74.581	Latimeria_chalumnae
ENSMMUG00000011924	TNRC6C	97	71.988	ENSLOCG00000013377	tnrc6c1	99	55.865	Lepisosteus_oculatus
ENSMMUG00000011924	TNRC6C	100	90.807	ENSLAFG00000011122	TNRC6C	99	88.762	Loxodonta_africana
ENSMMUG00000011924	TNRC6C	100	100.000	ENSMFAG00000043943	TNRC6C	100	100.000	Macaca_fascicularis
ENSMMUG00000011924	TNRC6C	100	99.941	ENSMNEG00000030405	TNRC6C	100	99.941	Macaca_nemestrina
ENSMMUG00000011924	TNRC6C	100	99.941	ENSMLEG00000033436	TNRC6C	100	99.942	Mandrillus_leucophaeus
ENSMMUG00000011924	TNRC6C	94	54.094	ENSMAMG00000023613	tnrc6c1	100	51.258	Mastacembelus_armatus
ENSMMUG00000011924	TNRC6C	100	48.222	ENSMZEG00005010920	tnrc6c1	99	48.813	Maylandia_zebra
ENSMMUG00000011924	TNRC6C	100	78.621	ENSMGAG00000003906	TNRC6C	100	80.997	Meleagris_gallopavo
ENSMMUG00000011924	TNRC6C	100	89.629	ENSMAUG00000021618	Tnrc6c	100	89.570	Mesocricetus_auratus
ENSMMUG00000011924	TNRC6C	100	94.316	ENSMICG00000003952	TNRC6C	100	94.319	Microcebus_murinus
ENSMMUG00000011924	TNRC6C	100	91.829	ENSMOCG00000015879	Tnrc6c	100	89.746	Microtus_ochrogaster
ENSMMUG00000011924	TNRC6C	79	55.899	ENSMMOG00000005203	tnrc6c1	100	50.480	Mola_mola
ENSMMUG00000011924	TNRC6C	100	87.176	ENSMODG00000001785	TNRC6C	99	84.935	Monodelphis_domestica
ENSMMUG00000011924	TNRC6C	100	91.297	MGP_CAROLIEiJ_G0017465	Tnrc6c	100	89.239	Mus_caroli
ENSMMUG00000011924	TNRC6C	100	91.060	ENSMUSG00000025571	Tnrc6c	100	89.014	Mus_musculus
ENSMMUG00000011924	TNRC6C	100	91.001	MGP_PahariEiJ_G0018593	Tnrc6c	100	88.958	Mus_pahari
ENSMMUG00000011924	TNRC6C	100	91.119	MGP_SPRETEiJ_G0018309	Tnrc6c	100	89.070	Mus_spretus
ENSMMUG00000011924	TNRC6C	100	86.936	ENSMPUG00000013348	TNRC6C	98	88.987	Mustela_putorius_furo
ENSMMUG00000011924	TNRC6C	100	82.377	ENSMLUG00000014431	TNRC6C	98	82.405	Myotis_lucifugus
ENSMMUG00000011924	TNRC6C	100	90.748	ENSNGAG00000012203	Tnrc6c	99	88.762	Nannospalax_galili
ENSMMUG00000011924	TNRC6C	98	51.161	ENSNBRG00000005344	tnrc6c1	99	49.389	Neolamprologus_brichardi
ENSMMUG00000011924	TNRC6C	100	93.376	ENSNLEG00000000047	TNRC6C	99	95.098	Nomascus_leucogenys
ENSMMUG00000011924	TNRC6C	97	81.879	ENSMEUG00000005104	TNRC6C	99	90.104	Notamacropus_eugenii
ENSMMUG00000011924	TNRC6C	100	92.007	ENSODEG00000012499	TNRC6C	100	92.185	Octodon_degus
ENSMMUG00000011924	TNRC6C	94	51.399	ENSONIG00000002210	tnrc6c1	96	52.326	Oreochromis_niloticus
ENSMMUG00000011924	TNRC6C	99	63.546	ENSOANG00000009758	-	100	60.742	Ornithorhynchus_anatinus
ENSMMUG00000011924	TNRC6C	81	88.421	ENSOCUG00000006122	TNRC6C	96	81.048	Oryctolagus_cuniculus
ENSMMUG00000011924	TNRC6C	91	50.306	ENSORLG00000009837	tnrc6c1	100	67.286	Oryzias_latipes
ENSMMUG00000011924	TNRC6C	91	50.245	ENSORLG00020016510	tnrc6c1	100	49.335	Oryzias_latipes_hni
ENSMMUG00000011924	TNRC6C	72	45.305	ENSORLG00015000171	tnrc6c1	98	44.921	Oryzias_latipes_hsok
ENSMMUG00000011924	TNRC6C	91	51.044	ENSOMEG00000000357	tnrc6c1	99	48.529	Oryzias_melastigma
ENSMMUG00000011924	TNRC6C	100	90.683	ENSOGAG00000007197	TNRC6C	100	93.159	Otolemur_garnettii
ENSMMUG00000011924	TNRC6C	96	82.840	ENSOARG00000006041	TNRC6C	97	85.441	Ovis_aries
ENSMMUG00000011924	TNRC6C	100	98.934	ENSPPAG00000027160	TNRC6C	100	99.014	Pan_paniscus
ENSMMUG00000011924	TNRC6C	100	89.250	ENSPPRG00000018881	TNRC6C	100	89.191	Panthera_pardus
ENSMMUG00000011924	TNRC6C	90	85.590	ENSPTIG00000008791	TNRC6C	81	96.429	Panthera_tigris_altaica
ENSMMUG00000011924	TNRC6C	100	98.934	ENSPTRG00000009699	TNRC6C	100	99.014	Pan_troglodytes
ENSMMUG00000011924	TNRC6C	100	99.822	ENSPANG00000019994	TNRC6C	100	99.822	Papio_anubis
ENSMMUG00000011924	TNRC6C	96	51.894	ENSPKIG00000005428	tnrc6c1	100	51.688	Paramormyrops_kingsleyae
ENSMMUG00000011924	TNRC6C	100	86.458	ENSPSIG00000018069	TNRC6C	100	84.438	Pelodiscus_sinensis
ENSMMUG00000011924	TNRC6C	79	54.194	ENSPMGG00000022911	tnrc6c1	97	62.857	Periophthalmus_magnuspinnatus
ENSMMUG00000011924	TNRC6C	100	90.925	ENSPEMG00000009785	Tnrc6c	100	88.509	Peromyscus_maniculatus_bairdii
ENSMMUG00000011924	TNRC6C	58	86.154	ENSPCIG00000017421	-	99	86.008	Phascolarctos_cinereus
ENSMMUG00000011924	TNRC6C	100	48.653	ENSPFOG00000012560	tnrc6c1	97	57.427	Poecilia_formosa
ENSMMUG00000011924	TNRC6C	100	48.789	ENSPLAG00000021055	tnrc6c1	100	49.916	Poecilia_latipinna
ENSMMUG00000011924	TNRC6C	99	98.976	ENSPPYG00000008679	TNRC6C	99	98.976	Pongo_abelii
ENSMMUG00000011924	TNRC6C	93	92.654	ENSPCAG00000012510	TNRC6C	91	92.654	Procavia_capensis
ENSMMUG00000011924	TNRC6C	100	94.790	ENSPCOG00000021451	TNRC6C	100	94.899	Propithecus_coquereli
ENSMMUG00000011924	TNRC6C	96	88.983	ENSPVAG00000002008	TNRC6C	95	88.983	Pteropus_vampyrus
ENSMMUG00000011924	TNRC6C	100	48.024	ENSPNYG00000014477	tnrc6c1	99	48.626	Pundamilia_nyererei
ENSMMUG00000011924	TNRC6C	100	90.420	ENSRNOG00000022395	Tnrc6c	100	90.420	Rattus_norvegicus
ENSMMUG00000011924	TNRC6C	100	99.467	ENSRBIG00000027777	TNRC6C	100	99.478	Rhinopithecus_bieti
ENSMMUG00000011924	TNRC6C	100	99.526	ENSRROG00000042912	TNRC6C	100	99.536	Rhinopithecus_roxellana
ENSMMUG00000011924	TNRC6C	100	95.486	ENSSBOG00000023981	TNRC6C	100	97.971	Saimiri_boliviensis_boliviensis
ENSMMUG00000011924	TNRC6C	52	86.378	ENSSHAG00000018330	-	100	89.730	Sarcophilus_harrisii
ENSMMUG00000011924	TNRC6C	90	57.641	ENSSFOG00015006475	tnrc6c1	99	51.960	Scleropages_formosus
ENSMMUG00000011924	TNRC6C	74	56.660	ENSSFOG00015004735	-	99	61.257	Scleropages_formosus
ENSMMUG00000011924	TNRC6C	100	48.947	ENSSMAG00000012761	tnrc6c1	99	50.546	Scophthalmus_maximus
ENSMMUG00000011924	TNRC6C	100	50.828	ENSSDUG00000002366	tnrc6c1	99	49.841	Seriola_dumerili
ENSMMUG00000011924	TNRC6C	100	49.057	ENSSLDG00000025613	tnrc6c1	100	50.139	Seriola_lalandi_dorsalis
ENSMMUG00000011924	TNRC6C	91	89.655	ENSSARG00000006816	TNRC6C	91	88.235	Sorex_araneus
ENSMMUG00000011924	TNRC6C	82	84.200	ENSSPUG00000007341	TNRC6C	98	86.458	Sphenodon_punctatus
ENSMMUG00000011924	TNRC6C	78	54.526	ENSSPAG00000014977	tnrc6c1	97	49.479	Stegastes_partitus
ENSMMUG00000011924	TNRC6C	100	85.799	ENSSSCG00000034373	TNRC6C	100	87.987	Sus_scrofa
ENSMMUG00000011924	TNRC6C	100	88.527	ENSTGUG00000007733	TNRC6C	100	86.517	Taeniopygia_guttata
ENSMMUG00000011924	TNRC6C	79	53.544	ENSTRUG00000011685	tnrc6c1	100	49.890	Takifugu_rubripes
ENSMMUG00000011924	TNRC6C	86	52.982	ENSTNIG00000005273	tnrc6c1	100	60.980	Tetraodon_nigroviridis
ENSMMUG00000011924	TNRC6C	67	82.146	ENSTBEG00000005046	TNRC6C	100	82.498	Tupaia_belangeri
ENSMMUG00000011924	TNRC6C	100	91.011	ENSTTRG00000010828	TNRC6C	97	91.070	Tursiops_truncatus
ENSMMUG00000011924	TNRC6C	100	88.948	ENSUMAG00000013614	TNRC6C	99	89.288	Ursus_maritimus
ENSMMUG00000011924	TNRC6C	52	81.093	ENSVPAG00000006765	-	99	81.100	Vicugna_pacos
ENSMMUG00000011924	TNRC6C	100	91.839	ENSVVUG00000015268	TNRC6C	100	91.839	Vulpes_vulpes
ENSMMUG00000011924	TNRC6C	100	75.264	ENSXETG00000019470	tnrc6c	100	74.618	Xenopus_tropicalis
ENSMMUG00000011924	TNRC6C	100	49.828	ENSXMAG00000025971	tnrc6c1	100	49.089	Xiphophorus_maculatus