EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000012019 (Gene tree)
Gene ID: 106997590
Gene Symbol: POLR2J
Alias: -
Full Name: DNA-directed RNA polymerase II subunit RPB11-a
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 5449 bases
Position: chr3:127872308-127877756
Accession: 106997590
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000015766	RNA_pol_L_2	PF13656.6	6.2e-29	1	1
ENSMMUP00000015767	RNA_pol_L_2	PF13656.6	3.5e-18	1	1
ENSMMUP00000015766	RNA_pol_L	PF01193.24	6.8e-10	1	1
ENSMMUP00000015767	RNA_pol_L	PF01193.24	0.00032	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000016836	POLR2J-202	264	-	ENSMMUP00000015767	87 (aa)	-	F7GYC9
ENSMMUT00000016835	POLR2J-201	393	XM_015134547	ENSMMUP00000015766	130 (aa)	XP_014990033	F7GYD1
ENSMMUT00000058520	POLR2J-203	213	-	ENSMMUP00000045598	71 (aa)	-	A0A1D5QC29

Gene Model

Click here to download ENSMMUG00000012019's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03020	RNA polymerase	KEGG
mcc05016	Huntington disease	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012019's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000012019	POLR2J	71	32.258	ENSMMUG00000041570	-	61	35.294
ENSMMUG00000012019	POLR2J	71	35.484	ENSMMUG00000020386	POLR1D	84	32.990

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012019	POLR2J	100	90.000	ENSG00000005075	POLR2J	100	90.000	Homo_sapiens
ENSMMUG00000012019	POLR2J	89	94.828	ENSG00000228049	POLR2J2	100	94.828	Homo_sapiens
ENSMMUG00000012019	POLR2J	100	85.385	ENSAPOG00000019538	polr2j	100	85.385	Acanthochromis_polyacanthus
ENSMMUG00000012019	POLR2J	100	90.769	ENSAMEG00000015480	-	100	90.769	Ailuropoda_melanoleuca
ENSMMUG00000012019	POLR2J	82	71.963	ENSACIG00000014549	POLR2J2	88	71.963	Amphilophus_citrinellus
ENSMMUG00000012019	POLR2J	100	84.615	ENSAOCG00000006937	polr2j	100	84.615	Amphiprion_ocellaris
ENSMMUG00000012019	POLR2J	100	85.385	ENSAPEG00000021761	polr2j	100	85.385	Amphiprion_percula
ENSMMUG00000012019	POLR2J	100	85.385	ENSATEG00000013312	-	100	85.385	Anabas_testudineus
ENSMMUG00000012019	POLR2J	100	85.385	ENSATEG00000009731	polr2j	100	85.385	Anabas_testudineus
ENSMMUG00000012019	POLR2J	82	98.592	ENSAPLG00000003744	-	100	86.842	Anas_platyrhynchos
ENSMMUG00000012019	POLR2J	100	81.538	ENSACAG00000000251	POLR2J	100	81.538	Anolis_carolinensis
ENSMMUG00000012019	POLR2J	100	85.385	ENSACLG00000014564	polr2j	100	85.385	Astatotilapia_calliptera
ENSMMUG00000012019	POLR2J	100	86.923	ENSAMXG00000007517	polr2j	100	86.923	Astyanax_mexicanus
ENSMMUG00000012019	POLR2J	56	68.493	ENSBTAG00000048046	-	61	68.493	Bos_taurus
ENSMMUG00000012019	POLR2J	80	71.154	WBGene00012187	rpb-11	84	71.154	Caenorhabditis_elegans
ENSMMUG00000012019	POLR2J	100	100.000	ENSCJAG00000016203	-	100	100.000	Callithrix_jacchus
ENSMMUG00000012019	POLR2J	100	90.000	ENSCAFG00000013683	-	100	90.000	Canis_familiaris
ENSMMUG00000012019	POLR2J	82	98.592	ENSTSYG00000029243	-	85	88.393	Carlito_syrichta
ENSMMUG00000012019	POLR2J	100	90.000	ENSCPOG00000001401	-	100	90.000	Cavia_porcellus
ENSMMUG00000012019	POLR2J	100	100.000	ENSCATG00000016595	-	100	100.000	Cercocebus_atys
ENSMMUG00000012019	POLR2J	100	90.000	ENSCLAG00000005238	-	100	90.000	Chinchilla_lanigera
ENSMMUG00000012019	POLR2J	100	90.000	ENSCSAG00000018092	-	100	90.000	Chlorocebus_sabaeus
ENSMMUG00000012019	POLR2J	100	73.077	ENSCING00000020531	-	100	73.077	Ciona_intestinalis
ENSMMUG00000012019	POLR2J	100	73.077	ENSCSAVG00000006948	-	100	73.077	Ciona_savignyi
ENSMMUG00000012019	POLR2J	100	98.851	ENSCGRG00001012814	Polr2j	100	98.851	Cricetulus_griseus_chok1gshd
ENSMMUG00000012019	POLR2J	100	76.154	ENSCGRG00000008433	Polr2j	100	76.154	Cricetulus_griseus_crigri
ENSMMUG00000012019	POLR2J	100	84.615	ENSCSEG00000020352	polr2j	100	84.615	Cynoglossus_semilaevis
ENSMMUG00000012019	POLR2J	100	84.615	ENSCVAG00000014267	polr2j	100	84.615	Cyprinodon_variegatus
ENSMMUG00000012019	POLR2J	100	86.154	ENSDARG00000035146	polr2j	100	86.154	Danio_rerio
ENSMMUG00000012019	POLR2J	100	100.000	ENSDORG00000005934	Polr2j	100	100.000	Dipodomys_ordii
ENSMMUG00000012019	POLR2J	98	70.312	FBgn0032634	Rpb11	98	70.312	Drosophila_melanogaster
ENSMMUG00000012019	POLR2J	100	86.207	ENSEBUG00000016100	polr2j	100	86.207	Eptatretus_burgeri
ENSMMUG00000012019	POLR2J	100	90.000	ENSEASG00005016864	-	100	90.000	Equus_asinus_asinus
ENSMMUG00000012019	POLR2J	100	86.154	ENSELUG00000012822	polr2j	100	86.154	Esox_lucius
ENSMMUG00000012019	POLR2J	100	90.000	ENSFCAG00000000377	-	100	90.000	Felis_catus
ENSMMUG00000012019	POLR2J	100	90.000	ENSFALG00000009523	POLR2J	100	90.000	Ficedula_albicollis
ENSMMUG00000012019	POLR2J	100	90.000	ENSFDAG00000010507	-	100	90.000	Fukomys_damarensis
ENSMMUG00000012019	POLR2J	100	85.385	ENSFHEG00000006625	polr2j	100	85.385	Fundulus_heteroclitus
ENSMMUG00000012019	POLR2J	100	85.385	ENSGMOG00000018207	polr2j	100	85.385	Gadus_morhua
ENSMMUG00000012019	POLR2J	100	90.000	ENSGALG00000030808	-	100	90.000	Gallus_gallus
ENSMMUG00000012019	POLR2J	100	85.385	ENSGAFG00000019555	polr2j	100	85.385	Gambusia_affinis
ENSMMUG00000012019	POLR2J	100	85.385	ENSGACG00000003310	polr2j	100	85.385	Gasterosteus_aculeatus
ENSMMUG00000012019	POLR2J	82	98.592	ENSGAGG00000018304	-	96	80.952	Gopherus_agassizii
ENSMMUG00000012019	POLR2J	82	92.958	ENSGGOG00000004519	-	80	84.956	Gorilla_gorilla
ENSMMUG00000012019	POLR2J	100	85.385	ENSHBUG00000008467	polr2j	100	85.385	Haplochromis_burtoni
ENSMMUG00000012019	POLR2J	100	100.000	ENSHGLG00000013598	POLR2J	100	100.000	Heterocephalus_glaber_female
ENSMMUG00000012019	POLR2J	100	100.000	ENSHGLG00100011242	POLR2J	100	100.000	Heterocephalus_glaber_male
ENSMMUG00000012019	POLR2J	100	85.385	ENSHCOG00000014827	polr2j	68	85.385	Hippocampus_comes
ENSMMUG00000012019	POLR2J	100	86.923	ENSIPUG00000023960	polr2j	100	86.923	Ictalurus_punctatus
ENSMMUG00000012019	POLR2J	100	100.000	ENSSTOG00000006377	POLR2J	100	100.000	Ictidomys_tridecemlineatus
ENSMMUG00000012019	POLR2J	100	100.000	ENSJJAG00000013854	-	100	100.000	Jaculus_jaculus
ENSMMUG00000012019	POLR2J	100	85.385	ENSJJAG00000018834	-	99	90.000	Jaculus_jaculus
ENSMMUG00000012019	POLR2J	100	85.385	ENSKMAG00000014581	polr2j	79	85.385	Kryptolebias_marmoratus
ENSMMUG00000012019	POLR2J	100	85.385	ENSLBEG00000005885	polr2j	100	85.385	Labrus_bergylta
ENSMMUG00000012019	POLR2J	100	86.923	ENSLOCG00000001885	polr2j	89	86.923	Lepisosteus_oculatus
ENSMMUG00000012019	POLR2J	100	90.000	ENSLAFG00000021507	-	100	90.000	Loxodonta_africana
ENSMMUG00000012019	POLR2J	100	85.385	ENSMAMG00000009374	polr2j	100	85.385	Mastacembelus_armatus
ENSMMUG00000012019	POLR2J	100	85.385	ENSMZEG00005011932	polr2j	100	85.385	Maylandia_zebra
ENSMMUG00000012019	POLR2J	100	90.000	ENSMGAG00000003534	POLR2J	100	90.000	Meleagris_gallopavo
ENSMMUG00000012019	POLR2J	100	98.851	ENSMAUG00000013049	Polr2j	100	98.851	Mesocricetus_auratus
ENSMMUG00000012019	POLR2J	71	95.161	ENSMICG00000026811	-	91	96.667	Microcebus_murinus
ENSMMUG00000012019	POLR2J	100	100.000	ENSMOCG00000001294	Polr2j	100	100.000	Microtus_ochrogaster
ENSMMUG00000012019	POLR2J	100	84.615	ENSMMOG00000013265	polr2j	100	84.615	Mola_mola
ENSMMUG00000012019	POLR2J	100	90.769	ENSMODG00000013617	-	100	90.769	Monodelphis_domestica
ENSMMUG00000012019	POLR2J	100	85.385	ENSMALG00000020749	polr2j	100	85.385	Monopterus_albus
ENSMMUG00000012019	POLR2J	100	98.851	MGP_CAROLIEiJ_G0027851	Polr2j	100	98.851	Mus_caroli
ENSMMUG00000012019	POLR2J	100	100.000	ENSMUSG00000039771	Polr2j	100	100.000	Mus_musculus
ENSMMUG00000012019	POLR2J	100	98.851	MGP_PahariEiJ_G0024434	Polr2j	100	98.851	Mus_pahari
ENSMMUG00000012019	POLR2J	100	100.000	MGP_SPRETEiJ_G0028853	Polr2j	100	100.000	Mus_spretus
ENSMMUG00000012019	POLR2J	100	90.000	ENSMLUG00000010467	POLR2J	100	90.000	Myotis_lucifugus
ENSMMUG00000012019	POLR2J	100	98.851	ENSNGAG00000023412	Polr2j	100	98.851	Nannospalax_galili
ENSMMUG00000012019	POLR2J	59	90.909	ENSNBRG00000006580	polr2j	59	90.909	Neolamprologus_brichardi
ENSMMUG00000012019	POLR2J	100	90.000	ENSODEG00000015648	-	95	100.000	Octodon_degus
ENSMMUG00000012019	POLR2J	100	70.000	ENSODEG00000008559	-	100	70.000	Octodon_degus
ENSMMUG00000012019	POLR2J	100	85.385	ENSONIG00000000259	polr2j	100	85.385	Oreochromis_niloticus
ENSMMUG00000012019	POLR2J	100	87.692	ENSOANG00000020912	POLR2J	100	87.692	Ornithorhynchus_anatinus
ENSMMUG00000012019	POLR2J	100	90.909	ENSOCUG00000023609	POLR2J	100	90.909	Oryctolagus_cuniculus
ENSMMUG00000012019	POLR2J	100	85.385	ENSORLG00000029046	polr2j	83	85.385	Oryzias_latipes
ENSMMUG00000012019	POLR2J	100	85.385	ENSORLG00020007625	polr2j	83	85.385	Oryzias_latipes_hni
ENSMMUG00000012019	POLR2J	100	85.385	ENSORLG00015003457	polr2j	83	85.385	Oryzias_latipes_hsok
ENSMMUG00000012019	POLR2J	100	84.615	ENSOMEG00000002097	polr2j	100	84.615	Oryzias_melastigma
ENSMMUG00000012019	POLR2J	100	71.756	ENSOGAG00000008250	-	100	71.756	Otolemur_garnettii
ENSMMUG00000012019	POLR2J	100	90.000	ENSOARG00000014204	-	98	90.000	Ovis_aries
ENSMMUG00000012019	POLR2J	100	90.000	ENSPPRG00000012439	-	100	90.000	Panthera_pardus
ENSMMUG00000012019	POLR2J	82	98.592	ENSPTIG00000018714	-	100	86.207	Panthera_tigris_altaica
ENSMMUG00000012019	POLR2J	82	98.592	ENSPSIG00000010173	-	100	87.611	Pelodiscus_sinensis
ENSMMUG00000012019	POLR2J	100	85.385	ENSPMGG00000021256	polr2j	100	85.385	Periophthalmus_magnuspinnatus
ENSMMUG00000012019	POLR2J	100	98.851	ENSPEMG00000015733	Polr2j	100	98.851	Peromyscus_maniculatus_bairdii
ENSMMUG00000012019	POLR2J	100	90.000	ENSPCIG00000009026	-	100	90.000	Phascolarctos_cinereus
ENSMMUG00000012019	POLR2J	100	85.385	ENSPFOG00000012001	polr2j	99	85.385	Poecilia_formosa
ENSMMUG00000012019	POLR2J	100	85.385	ENSPLAG00000014075	polr2j	100	85.385	Poecilia_latipinna
ENSMMUG00000012019	POLR2J	100	85.385	ENSPMEG00000020585	polr2j	100	85.385	Poecilia_mexicana
ENSMMUG00000012019	POLR2J	100	85.385	ENSPREG00000015255	polr2j	100	85.385	Poecilia_reticulata
ENSMMUG00000012019	POLR2J	100	100.000	ENSPCOG00000024573	-	100	100.000	Propithecus_coquereli
ENSMMUG00000012019	POLR2J	82	100.000	ENSPVAG00000017770	-	61	100.000	Pteropus_vampyrus
ENSMMUG00000012019	POLR2J	100	85.385	ENSPNYG00000014832	polr2j	100	85.385	Pundamilia_nyererei
ENSMMUG00000012019	POLR2J	100	84.615	ENSPNAG00000016595	polr2j	100	84.615	Pygocentrus_nattereri
ENSMMUG00000012019	POLR2J	100	90.000	ENSRNOG00000001430	Polr2j	100	90.000	Rattus_norvegicus
ENSMMUG00000012019	POLR2J	100	100.000	ENSSBOG00000025579	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSMMUG00000012019	POLR2J	80	98.571	ENSSHAG00000010443	-	82	98.571	Sarcophilus_harrisii
ENSMMUG00000012019	POLR2J	88	91.304	ENSSFOG00015003371	polr2j	87	91.304	Scleropages_formosus
ENSMMUG00000012019	POLR2J	100	85.385	ENSSMAG00000006729	polr2j	100	85.385	Scophthalmus_maximus
ENSMMUG00000012019	POLR2J	100	85.385	ENSSDUG00000018490	polr2j	100	85.385	Seriola_dumerili
ENSMMUG00000012019	POLR2J	100	85.385	ENSSLDG00000022354	polr2j	100	85.385	Seriola_lalandi_dorsalis
ENSMMUG00000012019	POLR2J	100	90.000	ENSSPUG00000010802	-	100	90.000	Sphenodon_punctatus
ENSMMUG00000012019	POLR2J	100	85.385	ENSSPAG00000021953	polr2j	100	85.385	Stegastes_partitus
ENSMMUG00000012019	POLR2J	100	74.615	ENSSSCG00000003703	-	83	74.615	Sus_scrofa
ENSMMUG00000012019	POLR2J	100	90.000	ENSSSCG00000007688	-	100	90.000	Sus_scrofa
ENSMMUG00000012019	POLR2J	79	100.000	ENSTGUG00000004510	-	100	100.000	Taeniopygia_guttata
ENSMMUG00000012019	POLR2J	82	98.592	ENSTGUG00000004501	-	100	87.611	Taeniopygia_guttata
ENSMMUG00000012019	POLR2J	100	86.154	ENSTRUG00000020842	polr2j	100	86.154	Takifugu_rubripes
ENSMMUG00000012019	POLR2J	100	85.385	ENSTNIG00000002994	polr2j	100	85.385	Tetraodon_nigroviridis
ENSMMUG00000012019	POLR2J	82	82.075	ENSTBEG00000005797	-	70	82.075	Tupaia_belangeri
ENSMMUG00000012019	POLR2J	100	90.000	ENSUAMG00000011310	-	100	90.000	Ursus_americanus
ENSMMUG00000012019	POLR2J	100	90.000	ENSUMAG00000012594	-	100	90.000	Ursus_maritimus
ENSMMUG00000012019	POLR2J	100	88.462	ENSXETG00000001108	polr2j	100	88.462	Xenopus_tropicalis
ENSMMUG00000012019	POLR2J	100	85.385	ENSXMAG00000012422	polr2j	100	85.385	Xiphophorus_maculatus