EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000012036 (Gene tree)
Gene ID: 700732
Gene Symbol: RBM47
Alias: FLJ20273|NET18
Full Name: RNA binding motif protein 47
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 209436 bases
Position: chr5:40183094-40392529
Accession: 700732
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000035317	RRM_1	PF00076.22	1.4e-38	1	3
ENSMMUP00000035317	RRM_1	PF00076.22	1.4e-38	2	3
ENSMMUP00000035317	RRM_1	PF00076.22	1.4e-38	3	3
ENSMMUP00000015789	RRM_1	PF00076.22	7.1e-38	1	3
ENSMMUP00000015789	RRM_1	PF00076.22	7.1e-38	2	3
ENSMMUP00000015789	RRM_1	PF00076.22	7.1e-38	3	3
ENSMMUP00000015788	RRM_1	PF00076.22	7.9e-16	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000016859	RBM47-202	1782	XM_001094904	ENSMMUP00000015789	593 (aa)	XP_001094904	F7GWI0
ENSMMUT00000016858	RBM47-201	5144	-	ENSMMUP00000015788	193 (aa)	-	F7GWI1
ENSMMUT00000042317	RBM47-203	1182	-	ENSMMUP00000035317	393 (aa)	-	F7F3H5

Gene Model

Click here to download ENSMMUG00000012036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012036's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000012036	RBM47	90	59.322	ENSMMUG00000010970	HNRNPR	85	45.475
ENSMMUG00000012036	RBM47	90	57.627	ENSMMUG00000012575	SYNCRIP	95	46.292
ENSMMUG00000012036	RBM47	87	77.246	ENSMMUG00000021147	RBM46	62	74.333
ENSMMUG00000012036	RBM47	82	57.764	ENSMMUG00000029540	-	79	43.891
ENSMMUG00000012036	RBM47	81	45.513	ENSMMUG00000004480	DND1	58	43.415
ENSMMUG00000012036	RBM47	91	69.886	ENSMMUG00000007077	A1CF	74	59.910

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012036	RBM47	100	100.000	ENSG00000163694	RBM47	100	100.000	Homo_sapiens
ENSMMUG00000012036	RBM47	100	82.902	ENSAPOG00000011062	rbm47	93	84.746	Acanthochromis_polyacanthus
ENSMMUG00000012036	RBM47	100	97.927	ENSAMEG00000009672	RBM47	100	96.477	Ailuropoda_melanoleuca
ENSMMUG00000012036	RBM47	100	83.420	ENSACIG00000011531	rbm47	100	75.418	Amphilophus_citrinellus
ENSMMUG00000012036	RBM47	100	82.902	ENSAOCG00000022245	rbm47	93	84.746	Amphiprion_ocellaris
ENSMMUG00000012036	RBM47	100	82.902	ENSAPEG00000018304	rbm47	93	84.746	Amphiprion_percula
ENSMMUG00000012036	RBM47	100	78.744	ENSATEG00000018400	rbm47	94	77.163	Anabas_testudineus
ENSMMUG00000012036	RBM47	100	92.228	ENSAPLG00000013974	RBM47	100	87.584	Anas_platyrhynchos
ENSMMUG00000012036	RBM47	100	86.167	ENSACAG00000011833	RBM47	100	85.667	Anolis_carolinensis
ENSMMUG00000012036	RBM47	100	98.964	ENSANAG00000029440	RBM47	100	98.651	Aotus_nancymaae
ENSMMUG00000012036	RBM47	100	80.000	ENSACLG00000016902	rbm47	94	85.311	Astatotilapia_calliptera
ENSMMUG00000012036	RBM47	100	79.024	ENSAMXG00000021794	rbm47	95	77.108	Astyanax_mexicanus
ENSMMUG00000012036	RBM47	100	98.446	ENSBTAG00000002356	RBM47	100	96.975	Bos_taurus
ENSMMUG00000012036	RBM47	100	98.485	ENSCJAG00000019385	RBM47	100	98.485	Callithrix_jacchus
ENSMMUG00000012036	RBM47	96	93.182	ENSCAFG00000015898	RBM47	100	93.456	Canis_familiaris
ENSMMUG00000012036	RBM47	89	96.491	ENSCAFG00020010558	RBM47	94	94.695	Canis_lupus_dingo
ENSMMUG00000012036	RBM47	100	98.964	ENSCHIG00000026214	RBM47	100	97.311	Capra_hircus
ENSMMUG00000012036	RBM47	86	80.550	ENSTSYG00000033612	RBM47	93	89.823	Carlito_syrichta
ENSMMUG00000012036	RBM47	100	87.731	ENSCAPG00000008426	RBM47	100	87.731	Cavia_aperea
ENSMMUG00000012036	RBM47	100	97.409	ENSCPOG00000014100	RBM47	100	94.286	Cavia_porcellus
ENSMMUG00000012036	RBM47	100	98.485	ENSCCAG00000030129	-	100	98.485	Cebus_capucinus
ENSMMUG00000012036	RBM47	99	68.289	ENSCCAG00000024397	-	99	66.779	Cebus_capucinus
ENSMMUG00000012036	RBM47	100	100.000	ENSCATG00000042064	RBM47	100	100.000	Cercocebus_atys
ENSMMUG00000012036	RBM47	100	96.373	ENSCLAG00000001684	RBM47	100	95.570	Chinchilla_lanigera
ENSMMUG00000012036	RBM47	100	100.000	ENSCSAG00000017060	RBM47	100	100.000	Chlorocebus_sabaeus
ENSMMUG00000012036	RBM47	100	97.938	ENSCHOG00000011731	RBM47	88	93.671	Choloepus_hoffmanni
ENSMMUG00000012036	RBM47	100	92.228	ENSCPBG00000013831	RBM47	100	89.500	Chrysemys_picta_bellii
ENSMMUG00000012036	RBM47	100	100.000	ENSCANG00000019997	RBM47	100	99.831	Colobus_angolensis_palliatus
ENSMMUG00000012036	RBM47	100	94.819	ENSCGRG00001000623	-	100	92.953	Cricetulus_griseus_chok1gshd
ENSMMUG00000012036	RBM47	100	88.083	ENSCGRG00001020102	-	100	71.644	Cricetulus_griseus_chok1gshd
ENSMMUG00000012036	RBM47	100	94.819	ENSCGRG00000007762	-	100	94.937	Cricetulus_griseus_crigri
ENSMMUG00000012036	RBM47	100	87.047	ENSCGRG00000014760	-	100	71.309	Cricetulus_griseus_crigri
ENSMMUG00000012036	RBM47	100	81.865	ENSCSEG00000004545	rbm47	100	73.000	Cynoglossus_semilaevis
ENSMMUG00000012036	RBM47	100	84.456	ENSCVAG00000020144	rbm47	93	84.986	Cyprinodon_variegatus
ENSMMUG00000012036	RBM47	100	79.024	ENSDARG00000061985	rbm47	95	77.855	Danio_rerio
ENSMMUG00000012036	RBM47	100	98.446	ENSDNOG00000046854	RBM47	100	94.958	Dasypus_novemcinctus
ENSMMUG00000012036	RBM47	100	96.373	ENSDORG00000010144	Rbm47	100	93.980	Dipodomys_ordii
ENSMMUG00000012036	RBM47	100	96.373	ENSETEG00000009194	RBM47	100	93.645	Echinops_telfairi
ENSMMUG00000012036	RBM47	100	68.394	ENSEBUG00000011912	rbm47	95	59.445	Eptatretus_burgeri
ENSMMUG00000012036	RBM47	100	98.446	ENSEASG00005008443	RBM47	100	97.143	Equus_asinus_asinus
ENSMMUG00000012036	RBM47	100	98.446	ENSECAG00000004400	RBM47	100	97.143	Equus_caballus
ENSMMUG00000012036	RBM47	100	96.392	ENSEEUG00000001194	RBM47	75	96.537	Erinaceus_europaeus
ENSMMUG00000012036	RBM47	99	82.292	ENSELUG00000006148	rbm47	93	85.237	Esox_lucius
ENSMMUG00000012036	RBM47	100	98.964	ENSFCAG00000012399	RBM47	100	96.801	Felis_catus
ENSMMUG00000012036	RBM47	100	91.710	ENSFALG00000002861	RBM47	100	90.620	Ficedula_albicollis
ENSMMUG00000012036	RBM47	100	93.277	ENSFDAG00000016326	RBM47	100	92.941	Fukomys_damarensis
ENSMMUG00000012036	RBM47	100	83.420	ENSFHEG00000007938	rbm47	100	74.080	Fundulus_heteroclitus
ENSMMUG00000012036	RBM47	100	79.717	ENSGMOG00000014802	rbm47	94	76.256	Gadus_morhua
ENSMMUG00000012036	RBM47	100	91.710	ENSGALG00000014267	RBM47	100	92.042	Gallus_gallus
ENSMMUG00000012036	RBM47	100	83.420	ENSGAFG00000020571	rbm47	99	79.630	Gambusia_affinis
ENSMMUG00000012036	RBM47	100	77.033	ENSGACG00000016223	rbm47	93	83.898	Gasterosteus_aculeatus
ENSMMUG00000012036	RBM47	100	92.228	ENSGAGG00000020051	RBM47	100	89.667	Gopherus_agassizii
ENSMMUG00000012036	RBM47	100	100.000	ENSGGOG00000001367	RBM47	100	100.000	Gorilla_gorilla
ENSMMUG00000012036	RBM47	100	80.000	ENSHBUG00000003520	rbm47	94	85.311	Haplochromis_burtoni
ENSMMUG00000012036	RBM47	100	96.891	ENSHGLG00000016914	RBM47	100	96.203	Heterocephalus_glaber_female
ENSMMUG00000012036	RBM47	100	93.782	ENSHGLG00100014028	-	100	96.203	Heterocephalus_glaber_male
ENSMMUG00000012036	RBM47	100	86.528	ENSHGLG00100003071	-	100	83.670	Heterocephalus_glaber_male
ENSMMUG00000012036	RBM47	100	83.077	ENSHCOG00000002074	rbm47	93	85.876	Hippocampus_comes
ENSMMUG00000012036	RBM47	100	82.383	ENSIPUG00000004743	rbm47	97	78.534	Ictalurus_punctatus
ENSMMUG00000012036	RBM47	100	96.891	ENSSTOG00000004727	RBM47	100	96.807	Ictidomys_tridecemlineatus
ENSMMUG00000012036	RBM47	100	94.872	ENSJJAG00000013823	Rbm47	100	94.799	Jaculus_jaculus
ENSMMUG00000012036	RBM47	100	83.590	ENSKMAG00000000084	rbm47	93	84.831	Kryptolebias_marmoratus
ENSMMUG00000012036	RBM47	100	82.051	ENSLBEG00000008436	rbm47	93	83.898	Labrus_bergylta
ENSMMUG00000012036	RBM47	100	89.637	ENSLACG00000007196	RBM47	100	84.422	Latimeria_chalumnae
ENSMMUG00000012036	RBM47	100	89.119	ENSLOCG00000012966	rbm47	95	80.402	Lepisosteus_oculatus
ENSMMUG00000012036	RBM47	100	96.891	ENSLAFG00000011998	RBM47	100	94.622	Loxodonta_africana
ENSMMUG00000012036	RBM47	100	100.000	ENSMFAG00000037967	RBM47	100	100.000	Macaca_fascicularis
ENSMMUG00000012036	RBM47	100	100.000	ENSMNEG00000040774	RBM47	100	99.831	Macaca_nemestrina
ENSMMUG00000012036	RBM47	100	100.000	ENSMLEG00000041432	RBM47	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000012036	RBM47	100	81.068	ENSMAMG00000019143	rbm47	94	81.551	Mastacembelus_armatus
ENSMMUG00000012036	RBM47	100	80.000	ENSMZEG00005023659	rbm47	95	77.682	Maylandia_zebra
ENSMMUG00000012036	RBM47	100	92.228	ENSMGAG00000012226	RBM47	100	90.333	Meleagris_gallopavo
ENSMMUG00000012036	RBM47	100	94.819	ENSMAUG00000006493	Rbm47	100	94.937	Mesocricetus_auratus
ENSMMUG00000012036	RBM47	100	89.713	ENSMICG00000026417	RBM47	100	91.231	Microcebus_murinus
ENSMMUG00000012036	RBM47	100	95.337	ENSMOCG00000021170	Rbm47	100	95.570	Microtus_ochrogaster
ENSMMUG00000012036	RBM47	100	79.126	ENSMMOG00000007260	rbm47	95	77.720	Mola_mola
ENSMMUG00000012036	RBM47	100	92.228	ENSMODG00000007003	RBM47	100	91.246	Monodelphis_domestica
ENSMMUG00000012036	RBM47	100	86.528	ENSMODG00000020561	-	100	80.607	Monodelphis_domestica
ENSMMUG00000012036	RBM47	90	83.708	ENSMODG00000015426	-	97	80.064	Monodelphis_domestica
ENSMMUG00000012036	RBM47	100	82.902	ENSMALG00000005167	rbm47	94	84.746	Monopterus_albus
ENSMMUG00000012036	RBM47	100	93.782	MGP_CAROLIEiJ_G0027258	Rbm47	100	93.671	Mus_caroli
ENSMMUG00000012036	RBM47	100	93.782	ENSMUSG00000070780	Rbm47	100	93.782	Mus_musculus
ENSMMUG00000012036	RBM47	100	94.301	MGP_PahariEiJ_G0017040	Rbm47	100	94.304	Mus_pahari
ENSMMUG00000012036	RBM47	100	93.782	MGP_SPRETEiJ_G0028253	Rbm47	100	93.671	Mus_spretus
ENSMMUG00000012036	RBM47	100	98.964	ENSMPUG00000006177	RBM47	94	97.475	Mustela_putorius_furo
ENSMMUG00000012036	RBM47	100	93.782	ENSMLUG00000000889	RBM47	100	92.282	Myotis_lucifugus
ENSMMUG00000012036	RBM47	100	97.409	ENSNGAG00000003325	Rbm47	100	94.286	Nannospalax_galili
ENSMMUG00000012036	RBM47	100	80.488	ENSNBRG00000015092	rbm47	95	78.028	Neolamprologus_brichardi
ENSMMUG00000012036	RBM47	100	100.000	ENSNLEG00000017151	RBM47	100	99.663	Nomascus_leucogenys
ENSMMUG00000012036	RBM47	91	94.886	ENSMEUG00000009516	-	99	87.264	Notamacropus_eugenii
ENSMMUG00000012036	RBM47	76	97.083	ENSOPRG00000016507	-	75	97.083	Ochotona_princeps
ENSMMUG00000012036	RBM47	100	95.855	ENSODEG00000004873	RBM47	100	94.790	Octodon_degus
ENSMMUG00000012036	RBM47	100	79.327	ENSONIG00000009061	rbm47	94	76.471	Oreochromis_niloticus
ENSMMUG00000012036	RBM47	100	87.374	ENSOANG00000008978	RBM47	100	87.188	Ornithorhynchus_anatinus
ENSMMUG00000012036	RBM47	100	96.392	ENSOCUG00000012034	RBM47	100	95.126	Oryctolagus_cuniculus
ENSMMUG00000012036	RBM47	100	84.456	ENSORLG00000005847	rbm47	94	84.225	Oryzias_latipes
ENSMMUG00000012036	RBM47	100	84.456	ENSORLG00020005154	rbm47	94	84.225	Oryzias_latipes_hni
ENSMMUG00000012036	RBM47	100	84.974	ENSORLG00015000066	rbm47	94	84.507	Oryzias_latipes_hsok
ENSMMUG00000012036	RBM47	100	84.974	ENSOMEG00000010730	rbm47	100	75.418	Oryzias_melastigma
ENSMMUG00000012036	RBM47	100	91.192	ENSOGAG00000025193	-	100	87.205	Otolemur_garnettii
ENSMMUG00000012036	RBM47	100	98.446	ENSOGAG00000029367	-	100	97.475	Otolemur_garnettii
ENSMMUG00000012036	RBM47	100	89.112	ENSOARG00000012711	RBM47	100	89.112	Ovis_aries
ENSMMUG00000012036	RBM47	100	100.000	ENSPPAG00000029763	RBM47	100	99.831	Pan_paniscus
ENSMMUG00000012036	RBM47	100	98.964	ENSPPRG00000012873	RBM47	100	93.603	Panthera_pardus
ENSMMUG00000012036	RBM47	85	91.089	ENSPTIG00000017046	RBM47	100	89.505	Panthera_tigris_altaica
ENSMMUG00000012036	RBM47	100	100.000	ENSPTRG00000016006	RBM47	100	100.000	Pan_troglodytes
ENSMMUG00000012036	RBM47	100	100.000	ENSPANG00000005980	RBM47	100	100.000	Papio_anubis
ENSMMUG00000012036	RBM47	89	88.372	ENSPKIG00000005037	rbm47	95	76.522	Paramormyrops_kingsleyae
ENSMMUG00000012036	RBM47	100	81.347	ENSPKIG00000013431	RBM47	92	86.119	Paramormyrops_kingsleyae
ENSMMUG00000012036	RBM47	100	92.228	ENSPSIG00000017516	RBM47	97	90.226	Pelodiscus_sinensis
ENSMMUG00000012036	RBM47	100	82.902	ENSPMGG00000018540	rbm47	100	74.415	Periophthalmus_magnuspinnatus
ENSMMUG00000012036	RBM47	100	95.337	ENSPEMG00000011088	Rbm47	100	94.454	Peromyscus_maniculatus_bairdii
ENSMMUG00000012036	RBM47	89	90.116	ENSPFOG00000007997	rbm47	94	77.470	Poecilia_formosa
ENSMMUG00000012036	RBM47	100	82.902	ENSPLAG00000002072	rbm47	100	80.481	Poecilia_latipinna
ENSMMUG00000012036	RBM47	100	83.420	ENSPMEG00000017492	rbm47	93	84.136	Poecilia_mexicana
ENSMMUG00000012036	RBM47	100	83.420	ENSPREG00000008456	rbm47	100	80.749	Poecilia_reticulata
ENSMMUG00000012036	RBM47	98	85.932	ENSPPYG00000014688	RBM47	98	84.682	Pongo_abelii
ENSMMUG00000012036	RBM47	100	97.927	ENSPCAG00000011879	RBM47	81	97.500	Procavia_capensis
ENSMMUG00000012036	RBM47	100	92.761	ENSPCOG00000023451	RBM47	100	93.266	Propithecus_coquereli
ENSMMUG00000012036	RBM47	100	97.409	ENSPVAG00000003812	RBM47	100	95.805	Pteropus_vampyrus
ENSMMUG00000012036	RBM47	100	80.000	ENSPNYG00000022868	rbm47	95	77.586	Pundamilia_nyererei
ENSMMUG00000012036	RBM47	100	79.024	ENSPNAG00000007940	rbm47	95	77.797	Pygocentrus_nattereri
ENSMMUG00000012036	RBM47	100	94.819	ENSRNOG00000002408	Rbm47	100	93.782	Rattus_norvegicus
ENSMMUG00000012036	RBM47	100	100.000	ENSRBIG00000039601	RBM47	100	99.831	Rhinopithecus_bieti
ENSMMUG00000012036	RBM47	100	100.000	ENSRROG00000044696	RBM47	100	99.831	Rhinopithecus_roxellana
ENSMMUG00000012036	RBM47	100	98.446	ENSSBOG00000028475	RBM47	100	98.551	Saimiri_boliviensis_boliviensis
ENSMMUG00000012036	RBM47	100	93.264	ENSSHAG00000017576	RBM47	100	91.582	Sarcophilus_harrisii
ENSMMUG00000012036	RBM47	100	83.420	ENSSFOG00015024101	RBM47	97	75.648	Scleropages_formosus
ENSMMUG00000012036	RBM47	100	77.451	ENSSFOG00015012445	rbm47	94	74.087	Scleropages_formosus
ENSMMUG00000012036	RBM47	100	77.295	ENSSMAG00000009744	rbm47	94	82.486	Scophthalmus_maximus
ENSMMUG00000012036	RBM47	100	83.938	ENSSDUG00000022684	rbm47	100	76.087	Seriola_dumerili
ENSMMUG00000012036	RBM47	100	84.456	ENSSLDG00000003109	rbm47	92	84.986	Seriola_lalandi_dorsalis
ENSMMUG00000012036	RBM47	100	98.446	ENSSARG00000001735	RBM47	75	95.759	Sorex_araneus
ENSMMUG00000012036	RBM47	100	89.119	ENSSPUG00000007515	RBM47	100	91.176	Sphenodon_punctatus
ENSMMUG00000012036	RBM47	100	84.974	ENSSPAG00000001257	rbm47	93	85.593	Stegastes_partitus
ENSMMUG00000012036	RBM47	100	98.446	ENSSSCG00000008796	RBM47	100	96.807	Sus_scrofa
ENSMMUG00000012036	RBM47	100	91.710	ENSTGUG00000008705	RBM47	100	89.950	Taeniopygia_guttata
ENSMMUG00000012036	RBM47	100	83.420	ENSTRUG00000014050	rbm47	100	74.415	Takifugu_rubripes
ENSMMUG00000012036	RBM47	100	79.126	ENSTNIG00000006127	rbm47	95	77.163	Tetraodon_nigroviridis
ENSMMUG00000012036	RBM47	100	95.337	ENSTBEG00000001607	RBM47	76	91.139	Tupaia_belangeri
ENSMMUG00000012036	RBM47	100	98.964	ENSTTRG00000002839	RBM47	100	96.134	Tursiops_truncatus
ENSMMUG00000012036	RBM47	100	98.446	ENSUAMG00000021346	RBM47	100	96.970	Ursus_americanus
ENSMMUG00000012036	RBM47	76	98.630	ENSVPAG00000000641	-	57	98.630	Vicugna_pacos
ENSMMUG00000012036	RBM47	96	94.580	ENSVVUG00000014774	RBM47	100	93.624	Vulpes_vulpes
ENSMMUG00000012036	RBM47	100	86.528	ENSXETG00000012802	rbm47	100	84.757	Xenopus_tropicalis
ENSMMUG00000012036	RBM47	100	83.420	ENSXCOG00000000780	rbm47	100	80.481	Xiphophorus_couchianus
ENSMMUG00000012036	RBM47	100	83.420	ENSXMAG00000009874	rbm47	93	83.853	Xiphophorus_maculatus