EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000012281 (Gene tree)
Gene ID: 718256
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 38622 bases
Position: chr15:41980456-42019077
Accession: 718256
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000054350	MIF4G_like	PF09088.11	3.1e-36	1	1
ENSMMUP00000016111	MIF4G_like	PF09088.11	9.3e-36	1	1
ENSMMUP00000054350	MIF4G_like_2	PF09090.11	2.7e-85	1	1
ENSMMUP00000016111	MIF4G_like_2	PF09090.11	4.5e-85	1	1
ENSMMUP00000054350	MIF4G	PF02854.19	1.5e-30	1	1
ENSMMUP00000016111	MIF4G	PF02854.19	4e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000046483	NCBP1-203	249	-	ENSMMUP00000039520	82 (aa)	-	F7H2J4
ENSMMUT00000063629	NCBP1-201	4855	XM_015117232	ENSMMUP00000054350	788 (aa)	XP_014972718	A0A1D5R216
ENSMMUT00000017202	NCBP1-202	2115	XM_015117233	ENSMMUP00000016111	704 (aa)	XP_014972719	F7DRW1

Gene Model

Click here to download ENSMMUG00000012281's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03013	RNA transport	KEGG
mcc03015	mRNA surveillance pathway	KEGG
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012281's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012281	NCBP1	99	100.000	ENSG00000136937	NCBP1	99	100.000	Homo_sapiens
ENSMMUG00000012281	NCBP1	99	83.428	ENSAPOG00000008002	NCBP1	98	83.014	Acanthochromis_polyacanthus
ENSMMUG00000012281	NCBP1	99	99.430	ENSAMEG00000004763	NCBP1	99	99.360	Ailuropoda_melanoleuca
ENSMMUG00000012281	NCBP1	99	83.830	ENSACIG00000000274	NCBP1	98	83.120	Amphilophus_citrinellus
ENSMMUG00000012281	NCBP1	99	83.569	ENSAOCG00000021148	NCBP1	98	83.142	Amphiprion_ocellaris
ENSMMUG00000012281	NCBP1	99	83.569	ENSAPEG00000001701	NCBP1	98	83.142	Amphiprion_percula
ENSMMUG00000012281	NCBP1	99	83.003	ENSATEG00000006929	NCBP1	98	82.503	Anabas_testudineus
ENSMMUG00000012281	NCBP1	99	90.691	ENSAPLG00000016318	NCBP1	100	90.753	Anas_platyrhynchos
ENSMMUG00000012281	NCBP1	99	87.798	ENSACAG00000004409	NCBP1	86	87.199	Anolis_carolinensis
ENSMMUG00000012281	NCBP1	99	99.858	ENSANAG00000025744	NCBP1	99	99.860	Aotus_nancymaae
ENSMMUG00000012281	NCBP1	99	83.024	ENSACLG00000014812	NCBP1	99	82.961	Astatotilapia_calliptera
ENSMMUG00000012281	NCBP1	99	81.529	ENSAMXG00000016364	NCBP1	98	81.019	Astyanax_mexicanus
ENSMMUG00000012281	NCBP1	99	99.101	ENSBTAG00000009732	NCBP1	99	99.101	Bos_taurus
ENSMMUG00000012281	NCBP1	99	34.302	WBGene00018156	ncbp-1	98	33.960	Caenorhabditis_elegans
ENSMMUG00000012281	NCBP1	99	99.743	ENSCJAG00000010840	NCBP1	99	99.743	Callithrix_jacchus
ENSMMUG00000012281	NCBP1	99	99.615	ENSCAFG00000002445	NCBP1	99	99.615	Canis_familiaris
ENSMMUG00000012281	NCBP1	99	99.573	ENSCAFG00020017997	NCBP1	100	99.561	Canis_lupus_dingo
ENSMMUG00000012281	NCBP1	99	98.845	ENSCHIG00000020139	NCBP1	99	98.845	Capra_hircus
ENSMMUG00000012281	NCBP1	51	99.502	ENSTSYG00000011914	NCBP1	98	100.000	Carlito_syrichta
ENSMMUG00000012281	NCBP1	89	89.314	ENSCAPG00000014252	NCBP1	90	89.375	Cavia_aperea
ENSMMUG00000012281	NCBP1	99	99.430	ENSCPOG00000012573	NCBP1	99	97.653	Cavia_porcellus
ENSMMUG00000012281	NCBP1	99	99.872	ENSCCAG00000032297	NCBP1	99	99.872	Cebus_capucinus
ENSMMUG00000012281	NCBP1	100	100.000	ENSCATG00000010052	NCBP1	100	100.000	Cercocebus_atys
ENSMMUG00000012281	NCBP1	99	99.715	ENSCLAG00000014339	NCBP1	99	99.615	Chinchilla_lanigera
ENSMMUG00000012281	NCBP1	99	100.000	ENSCSAG00000010929	NCBP1	99	100.000	Chlorocebus_sabaeus
ENSMMUG00000012281	NCBP1	90	96.610	ENSCHOG00000010332	NCBP1	90	96.610	Choloepus_hoffmanni
ENSMMUG00000012281	NCBP1	99	90.523	ENSCPBG00000024344	NCBP1	99	90.694	Chrysemys_picta_bellii
ENSMMUG00000012281	NCBP1	99	54.373	ENSCING00000008990	-	98	54.442	Ciona_intestinalis
ENSMMUG00000012281	NCBP1	99	53.778	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSMMUG00000012281	NCBP1	99	100.000	ENSCANG00000036913	NCBP1	99	100.000	Colobus_angolensis_palliatus
ENSMMUG00000012281	NCBP1	99	98.460	ENSCGRG00001015771	Ncbp1	99	98.460	Cricetulus_griseus_chok1gshd
ENSMMUG00000012281	NCBP1	99	98.460	ENSCGRG00000010311	Ncbp1	99	98.460	Cricetulus_griseus_crigri
ENSMMUG00000012281	NCBP1	99	83.024	ENSCSEG00000012377	NCBP1	99	83.077	Cynoglossus_semilaevis
ENSMMUG00000012281	NCBP1	99	80.612	ENSCVAG00000008795	NCBP1	98	81.250	Cyprinodon_variegatus
ENSMMUG00000012281	NCBP1	99	98.331	ENSDNOG00000006885	NCBP1	100	98.097	Dasypus_novemcinctus
ENSMMUG00000012281	NCBP1	99	98.148	ENSDORG00000013652	Ncbp1	99	93.997	Dipodomys_ordii
ENSMMUG00000012281	NCBP1	99	57.423	FBgn0022942	Cbp80	98	58.056	Drosophila_melanogaster
ENSMMUG00000012281	NCBP1	81	35.413	FBgn0038887	CG7907	85	33.886	Drosophila_melanogaster
ENSMMUG00000012281	NCBP1	88	93.668	ENSETEG00000009705	NCBP1	88	93.668	Echinops_telfairi
ENSMMUG00000012281	NCBP1	99	73.913	ENSEBUG00000008386	NCBP1	98	73.657	Eptatretus_burgeri
ENSMMUG00000012281	NCBP1	99	99.101	ENSEASG00005022795	NCBP1	99	99.101	Equus_asinus_asinus
ENSMMUG00000012281	NCBP1	99	99.230	ENSECAG00000013847	NCBP1	99	99.230	Equus_caballus
ENSMMUG00000012281	NCBP1	94	93.801	ENSEEUG00000015973	NCBP1	98	93.396	Erinaceus_europaeus
ENSMMUG00000012281	NCBP1	99	80.867	ENSELUG00000022519	NCBP1	99	81.321	Esox_lucius
ENSMMUG00000012281	NCBP1	99	99.487	ENSFCAG00000001206	NCBP1	99	99.487	Felis_catus
ENSMMUG00000012281	NCBP1	99	90.000	ENSFALG00000001193	NCBP1	100	89.567	Ficedula_albicollis
ENSMMUG00000012281	NCBP1	99	99.430	ENSFDAG00000010864	NCBP1	99	99.358	Fukomys_damarensis
ENSMMUG00000012281	NCBP1	99	82.178	ENSFHEG00000000655	NCBP1	98	81.633	Fundulus_heteroclitus
ENSMMUG00000012281	NCBP1	99	79.491	ENSGMOG00000008653	NCBP1	98	79.464	Gadus_morhua
ENSMMUG00000012281	NCBP1	99	91.323	ENSGALG00000002087	NCBP1	98	90.757	Gallus_gallus
ENSMMUG00000012281	NCBP1	99	82.739	ENSGAFG00000017787	NCBP1	98	82.519	Gambusia_affinis
ENSMMUG00000012281	NCBP1	99	82.203	ENSGACG00000016772	NCBP1	97	81.783	Gasterosteus_aculeatus
ENSMMUG00000012281	NCBP1	99	90.240	ENSGAGG00000019483	NCBP1	99	90.417	Gopherus_agassizii
ENSMMUG00000012281	NCBP1	99	100.000	ENSGGOG00000001376	NCBP1	99	100.000	Gorilla_gorilla
ENSMMUG00000012281	NCBP1	99	82.886	ENSHBUG00000020843	NCBP1	98	82.503	Haplochromis_burtoni
ENSMMUG00000012281	NCBP1	99	86.684	ENSHGLG00000018112	-	99	86.684	Heterocephalus_glaber_female
ENSMMUG00000012281	NCBP1	99	99.573	ENSHGLG00000001882	NCBP1	99	99.487	Heterocephalus_glaber_female
ENSMMUG00000012281	NCBP1	99	99.573	ENSHGLG00100013014	NCBP1	99	99.487	Heterocephalus_glaber_male
ENSMMUG00000012281	NCBP1	99	86.428	ENSHGLG00100017373	-	99	86.428	Heterocephalus_glaber_male
ENSMMUG00000012281	NCBP1	88	72.222	ENSHCOG00000000204	NCBP1	92	72.222	Hippocampus_comes
ENSMMUG00000012281	NCBP1	99	82.037	ENSIPUG00000007275	ncbp1	98	81.633	Ictalurus_punctatus
ENSMMUG00000012281	NCBP1	99	99.358	ENSSTOG00000002695	NCBP1	99	99.358	Ictidomys_tridecemlineatus
ENSMMUG00000012281	NCBP1	99	82.011	ENSKMAG00000003594	NCBP1	97	85.714	Kryptolebias_marmoratus
ENSMMUG00000012281	NCBP1	99	80.982	ENSLBEG00000011661	NCBP1	99	80.479	Labrus_bergylta
ENSMMUG00000012281	NCBP1	99	80.952	ENSLACG00000013955	NCBP1	99	80.454	Latimeria_chalumnae
ENSMMUG00000012281	NCBP1	99	71.934	ENSLOCG00000009579	NCBP1	99	71.934	Lepisosteus_oculatus
ENSMMUG00000012281	NCBP1	99	98.845	ENSLAFG00000005999	NCBP1	99	98.845	Loxodonta_africana
ENSMMUG00000012281	NCBP1	100	100.000	ENSMFAG00000030994	NCBP1	100	100.000	Macaca_fascicularis
ENSMMUG00000012281	NCBP1	99	100.000	ENSMNEG00000042790	NCBP1	99	100.000	Macaca_nemestrina
ENSMMUG00000012281	NCBP1	99	100.000	ENSMLEG00000030374	NCBP1	99	100.000	Mandrillus_leucophaeus
ENSMMUG00000012281	NCBP1	99	83.286	ENSMAMG00000014806	NCBP1	99	82.631	Mastacembelus_armatus
ENSMMUG00000012281	NCBP1	99	82.739	ENSMZEG00005009290	-	99	82.682	Maylandia_zebra
ENSMMUG00000012281	NCBP1	99	82.886	ENSMZEG00005003469	NCBP1	98	82.503	Maylandia_zebra
ENSMMUG00000012281	NCBP1	99	98.148	ENSMAUG00000020583	Ncbp1	99	97.951	Mesocricetus_auratus
ENSMMUG00000012281	NCBP1	99	99.358	ENSMICG00000012682	NCBP1	99	99.358	Microcebus_murinus
ENSMMUG00000012281	NCBP1	99	98.074	ENSMOCG00000015818	Ncbp1	99	98.074	Microtus_ochrogaster
ENSMMUG00000012281	NCBP1	99	82.311	ENSMMOG00000002610	NCBP1	99	82.238	Mola_mola
ENSMMUG00000012281	NCBP1	99	95.442	ENSMODG00000003202	NCBP1	98	93.342	Monodelphis_domestica
ENSMMUG00000012281	NCBP1	99	82.295	ENSMALG00000003547	NCBP1	98	81.865	Monopterus_albus
ENSMMUG00000012281	NCBP1	99	98.074	MGP_CAROLIEiJ_G0025982	Ncbp1	99	98.074	Mus_caroli
ENSMMUG00000012281	NCBP1	99	98.074	ENSMUSG00000028330	Ncbp1	99	98.074	Mus_musculus
ENSMMUG00000012281	NCBP1	99	98.331	MGP_PahariEiJ_G0028318	Ncbp1	99	98.331	Mus_pahari
ENSMMUG00000012281	NCBP1	99	98.074	MGP_SPRETEiJ_G0026945	Ncbp1	99	98.074	Mus_spretus
ENSMMUG00000012281	NCBP1	99	99.487	ENSMPUG00000006399	NCBP1	99	99.487	Mustela_putorius_furo
ENSMMUG00000012281	NCBP1	99	98.291	ENSMLUG00000015201	NCBP1	100	98.074	Myotis_lucifugus
ENSMMUG00000012281	NCBP1	99	98.331	ENSNGAG00000014101	Ncbp1	99	98.331	Nannospalax_galili
ENSMMUG00000012281	NCBP1	75	86.111	ENSNBRG00000014674	NCBP1	95	86.111	Neolamprologus_brichardi
ENSMMUG00000012281	NCBP1	100	100.000	ENSNLEG00000016909	NCBP1	100	100.000	Nomascus_leucogenys
ENSMMUG00000012281	NCBP1	89	94.595	ENSMEUG00000010672	NCBP1	90	92.342	Notamacropus_eugenii
ENSMMUG00000012281	NCBP1	79	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSMMUG00000012281	NCBP1	99	99.715	ENSODEG00000003232	NCBP1	99	99.615	Octodon_degus
ENSMMUG00000012281	NCBP1	99	82.886	ENSONIG00000001502	NCBP1	98	82.503	Oreochromis_niloticus
ENSMMUG00000012281	NCBP1	78	97.070	ENSOANG00000001918	NCBP1	100	95.666	Ornithorhynchus_anatinus
ENSMMUG00000012281	NCBP1	98	98.837	ENSOCUG00000013853	NCBP1	96	98.827	Oryctolagus_cuniculus
ENSMMUG00000012281	NCBP1	99	81.194	ENSORLG00000011008	NCBP1	98	81.346	Oryzias_latipes
ENSMMUG00000012281	NCBP1	99	81.194	ENSORLG00020017455	NCBP1	98	80.940	Oryzias_latipes_hni
ENSMMUG00000012281	NCBP1	99	81.321	ENSORLG00015012127	NCBP1	98	81.067	Oryzias_latipes_hsok
ENSMMUG00000012281	NCBP1	99	81.576	ENSOMEG00000020698	NCBP1	98	81.576	Oryzias_melastigma
ENSMMUG00000012281	NCBP1	99	99.744	ENSOGAG00000013888	NCBP1	99	99.744	Otolemur_garnettii
ENSMMUG00000012281	NCBP1	99	98.845	ENSOARG00000011233	NCBP1	99	98.845	Ovis_aries
ENSMMUG00000012281	NCBP1	99	100.000	ENSPPAG00000026462	NCBP1	99	100.000	Pan_paniscus
ENSMMUG00000012281	NCBP1	99	99.615	ENSPPRG00000022574	NCBP1	99	99.615	Panthera_pardus
ENSMMUG00000012281	NCBP1	99	99.615	ENSPTIG00000018507	NCBP1	99	99.615	Panthera_tigris_altaica
ENSMMUG00000012281	NCBP1	99	100.000	ENSPTRG00000021167	NCBP1	99	100.000	Pan_troglodytes
ENSMMUG00000012281	NCBP1	100	100.000	ENSPANG00000025591	NCBP1	100	100.000	Papio_anubis
ENSMMUG00000012281	NCBP1	99	80.995	ENSPKIG00000015861	NCBP1	99	81.060	Paramormyrops_kingsleyae
ENSMMUG00000012281	NCBP1	72	89.453	ENSPSIG00000009558	NCBP1	100	89.648	Pelodiscus_sinensis
ENSMMUG00000012281	NCBP1	99	79.566	ENSPMGG00000020476	NCBP1	98	79.055	Periophthalmus_magnuspinnatus
ENSMMUG00000012281	NCBP1	99	98.006	ENSPEMG00000020105	Ncbp1	99	97.946	Peromyscus_maniculatus_bairdii
ENSMMUG00000012281	NCBP1	99	67.975	ENSPMAG00000005533	NCBP1	98	67.975	Petromyzon_marinus
ENSMMUG00000012281	NCBP1	99	95.157	ENSPCIG00000015800	NCBP1	97	94.512	Phascolarctos_cinereus
ENSMMUG00000012281	NCBP1	99	81.831	ENSPFOG00000004158	NCBP1	98	81.449	Poecilia_formosa
ENSMMUG00000012281	NCBP1	99	82.320	ENSPLAG00000020002	NCBP1	98	81.888	Poecilia_latipinna
ENSMMUG00000012281	NCBP1	99	82.320	ENSPMEG00000019821	NCBP1	98	81.888	Poecilia_mexicana
ENSMMUG00000012281	NCBP1	99	82.203	ENSPREG00000006035	NCBP1	98	81.783	Poecilia_reticulata
ENSMMUG00000012281	NCBP1	99	100.000	ENSPPYG00000019426	NCBP1	99	100.000	Pongo_abelii
ENSMMUG00000012281	NCBP1	88	99.177	ENSPCAG00000009943	NCBP1	85	99.310	Procavia_capensis
ENSMMUG00000012281	NCBP1	90	99.281	ENSPCOG00000020024	NCBP1	98	99.342	Propithecus_coquereli
ENSMMUG00000012281	NCBP1	99	98.973	ENSPVAG00000005924	NCBP1	99	98.973	Pteropus_vampyrus
ENSMMUG00000012281	NCBP1	99	83.024	ENSPNYG00000002140	NCBP1	99	82.961	Pundamilia_nyererei
ENSMMUG00000012281	NCBP1	99	82.553	ENSPNAG00000027753	NCBP1	98	81.894	Pygocentrus_nattereri
ENSMMUG00000012281	NCBP1	99	98.203	ENSRNOG00000023605	Ncbp1	99	98.203	Rattus_norvegicus
ENSMMUG00000012281	NCBP1	100	100.000	ENSRBIG00000043175	NCBP1	100	100.000	Rhinopithecus_bieti
ENSMMUG00000012281	NCBP1	100	99.015	ENSRROG00000029767	NCBP1	100	99.015	Rhinopithecus_roxellana
ENSMMUG00000012281	NCBP1	99	99.872	ENSSBOG00000019378	NCBP1	99	99.872	Saimiri_boliviensis_boliviensis
ENSMMUG00000012281	NCBP1	99	61.481	ENSSHAG00000015882	NCBP1	72	95.331	Sarcophilus_harrisii
ENSMMUG00000012281	NCBP1	99	81.386	ENSSFOG00015001872	NCBP1	99	81.057	Scleropages_formosus
ENSMMUG00000012281	NCBP1	99	81.870	ENSSMAG00000007463	NCBP1	98	81.609	Scophthalmus_maximus
ENSMMUG00000012281	NCBP1	99	83.167	ENSSDUG00000007019	NCBP1	98	83.162	Seriola_dumerili
ENSMMUG00000012281	NCBP1	99	82.886	ENSSLDG00000021924	NCBP1	98	82.503	Seriola_lalandi_dorsalis
ENSMMUG00000012281	NCBP1	79	97.000	ENSSARG00000007274	NCBP1	87	90.830	Sorex_araneus
ENSMMUG00000012281	NCBP1	99	81.818	ENSSPUG00000008609	NCBP1	99	81.818	Sphenodon_punctatus
ENSMMUG00000012281	NCBP1	99	83.428	ENSSPAG00000012550	NCBP1	98	82.886	Stegastes_partitus
ENSMMUG00000012281	NCBP1	99	99.487	ENSSSCG00000005366	NCBP1	99	99.487	Sus_scrofa
ENSMMUG00000012281	NCBP1	99	84.017	ENSTGUG00000001472	NCBP1	99	84.056	Taeniopygia_guttata
ENSMMUG00000012281	NCBP1	99	82.011	ENSTRUG00000005287	NCBP1	98	81.609	Takifugu_rubripes
ENSMMUG00000012281	NCBP1	99	95.892	ENSTBEG00000004035	NCBP1	99	95.892	Tupaia_belangeri
ENSMMUG00000012281	NCBP1	87	100.000	ENSTTRG00000000507	NCBP1	86	100.000	Tursiops_truncatus
ENSMMUG00000012281	NCBP1	99	99.487	ENSUAMG00000005471	NCBP1	99	99.487	Ursus_americanus
ENSMMUG00000012281	NCBP1	97	99.561	ENSUMAG00000011865	NCBP1	100	99.561	Ursus_maritimus
ENSMMUG00000012281	NCBP1	99	99.430	ENSVPAG00000010537	NCBP1	99	95.122	Vicugna_pacos
ENSMMUG00000012281	NCBP1	99	99.615	ENSVVUG00000019725	NCBP1	99	99.615	Vulpes_vulpes
ENSMMUG00000012281	NCBP1	99	81.223	ENSXETG00000010179	ncbp1	99	81.154	Xenopus_tropicalis
ENSMMUG00000012281	NCBP1	99	82.461	ENSXMAG00000018253	NCBP1	98	82.015	Xiphophorus_maculatus