EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000012438 (Gene tree)
Gene ID: 721624
Gene Symbol: PABPN1L
Alias: ePABP2
Full Name: poly(A) binding protein nuclear 1 like%2C cytoplasmic
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 2818 bases
Position: chr20:73704268-73707085
Accession: 721624
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000016327	RRM_1	PF00076.22	4.5e-15	1	1
ENSMMUP00000032970	RRM_1	PF00076.22	3.9e-06	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000017434	PABPN1L-202	825	XM_015126782	ENSMMUP00000016327	274 (aa)	XP_014982268	F7DIS7
ENSMMUT00000039910	PABPN1L-201	747	-	ENSMMUP00000032970	249 (aa)	-	H9H4P7

Gene Model

Click here to download ENSMMUG00000012438's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03015	mRNA surveillance pathway	KEGG
mcc05164	Influenza A	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012438's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000012438	PABPN1L	71	49.500	ENSMMUG00000048382	-	64	50.246
ENSMMUG00000012438	PABPN1L	76	48.624	ENSMMUG00000014747	BCL2L2-PABPN1	98	60.959

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012438	PABPN1L	100	90.647	ENSG00000205022	PABPN1L	100	92.086	Homo_sapiens
ENSMMUG00000012438	PABPN1L	68	54.167	ENSAPOG00000000685	PABPN1L	57	55.208	Acanthochromis_polyacanthus
ENSMMUG00000012438	PABPN1L	56	58.065	ENSACIG00000021400	PABPN1L	85	56.790	Amphilophus_citrinellus
ENSMMUG00000012438	PABPN1L	59	53.614	ENSAOCG00000019844	PABPN1L	71	53.398	Amphiprion_ocellaris
ENSMMUG00000012438	PABPN1L	59	53.614	ENSAPEG00000019534	PABPN1L	71	53.398	Amphiprion_percula
ENSMMUG00000012438	PABPN1L	68	53.646	ENSATEG00000011646	PABPN1L	70	54.404	Anabas_testudineus
ENSMMUG00000012438	PABPN1L	70	59.585	ENSACAG00000013250	PABPN1L	99	59.585	Anolis_carolinensis
ENSMMUG00000012438	PABPN1L	100	81.159	ENSANAG00000038178	PABPN1L	100	81.884	Aotus_nancymaae
ENSMMUG00000012438	PABPN1L	73	51.500	ENSACLG00000025147	PABPN1L	71	52.000	Astatotilapia_calliptera
ENSMMUG00000012438	PABPN1L	58	56.604	ENSAMXG00000010873	PABPN1L	71	53.723	Astyanax_mexicanus
ENSMMUG00000012438	PABPN1L	100	66.906	ENSBTAG00000023752	-	100	66.906	Bos_taurus
ENSMMUG00000012438	PABPN1L	51	79.433	ENSBTAG00000006727	-	86	79.433	Bos_taurus
ENSMMUG00000012438	PABPN1L	100	81.884	ENSCJAG00000045284	PABPN1L	100	82.246	Callithrix_jacchus
ENSMMUG00000012438	PABPN1L	99	62.500	ENSCHIG00000013987	PABPN1L	100	58.562	Capra_hircus
ENSMMUG00000012438	PABPN1L	95	65.428	ENSCAPG00000007240	PABPN1L	100	64.684	Cavia_aperea
ENSMMUG00000012438	PABPN1L	100	67.273	ENSCPOG00000025951	PABPN1L	100	66.545	Cavia_porcellus
ENSMMUG00000012438	PABPN1L	100	84.420	ENSCCAG00000027631	PABPN1L	100	82.971	Cebus_capucinus
ENSMMUG00000012438	PABPN1L	100	96.727	ENSCATG00000031060	PABPN1L	100	96.727	Cercocebus_atys
ENSMMUG00000012438	PABPN1L	100	71.377	ENSCLAG00000000704	PABPN1L	100	70.182	Chinchilla_lanigera
ENSMMUG00000012438	PABPN1L	100	90.722	ENSCSAG00000002881	PABPN1L	100	90.722	Chlorocebus_sabaeus
ENSMMUG00000012438	PABPN1L	70	57.949	ENSCPBG00000023441	PABPN1L	61	60.204	Chrysemys_picta_bellii
ENSMMUG00000012438	PABPN1L	100	92.029	ENSCANG00000039336	PABPN1L	100	90.580	Colobus_angolensis_palliatus
ENSMMUG00000012438	PABPN1L	100	73.551	ENSCGRG00001013211	Pabpn1l	100	71.636	Cricetulus_griseus_chok1gshd
ENSMMUG00000012438	PABPN1L	100	73.551	ENSCGRG00000015868	Pabpn1l	100	71.636	Cricetulus_griseus_crigri
ENSMMUG00000012438	PABPN1L	100	60.071	ENSDNOG00000034677	PABPN1L	100	59.574	Dasypus_novemcinctus
ENSMMUG00000012438	PABPN1L	100	70.863	ENSEASG00005000777	PABPN1L	100	68.592	Equus_asinus_asinus
ENSMMUG00000012438	PABPN1L	100	71.583	ENSECAG00000000378	PABPN1L	100	69.314	Equus_caballus
ENSMMUG00000012438	PABPN1L	100	59.489	ENSEEUG00000004747	PABPN1L	100	58.029	Erinaceus_europaeus
ENSMMUG00000012438	PABPN1L	54	59.732	ENSELUG00000018385	PABPN1L	58	61.290	Esox_lucius
ENSMMUG00000012438	PABPN1L	100	71.326	ENSFCAG00000010465	PABPN1L	100	69.424	Felis_catus
ENSMMUG00000012438	PABPN1L	73	57.000	ENSFALG00000003319	PABPN1L	80	57.000	Ficedula_albicollis
ENSMMUG00000012438	PABPN1L	100	69.203	ENSFDAG00000021067	PABPN1L	100	68.000	Fukomys_damarensis
ENSMMUG00000012438	PABPN1L	59	53.704	ENSFHEG00000018295	PABPN1L	71	51.741	Fundulus_heteroclitus
ENSMMUG00000012438	PABPN1L	54	56.329	ENSGMOG00000001475	PABPN1L	68	54.497	Gadus_morhua
ENSMMUG00000012438	PABPN1L	61	63.690	ENSGALG00000006242	PABPN1L	94	63.690	Gallus_gallus
ENSMMUG00000012438	PABPN1L	59	53.614	ENSGAFG00000012565	PABPN1L	71	53.140	Gambusia_affinis
ENSMMUG00000012438	PABPN1L	59	51.807	ENSGACG00000015428	PABPN1L	72	51.471	Gasterosteus_aculeatus
ENSMMUG00000012438	PABPN1L	65	60.335	ENSGAGG00000010613	PABPN1L	59	60.335	Gopherus_agassizii
ENSMMUG00000012438	PABPN1L	100	93.455	ENSGGOG00000012670	PABPN1L	100	93.455	Gorilla_gorilla
ENSMMUG00000012438	PABPN1L	73	52.000	ENSHBUG00000002388	PABPN1L	71	52.000	Haplochromis_burtoni
ENSMMUG00000012438	PABPN1L	96	69.318	ENSHGLG00000014207	PABPN1L	100	68.821	Heterocephalus_glaber_female
ENSMMUG00000012438	PABPN1L	96	69.318	ENSHGLG00100005230	PABPN1L	100	68.821	Heterocephalus_glaber_male
ENSMMUG00000012438	PABPN1L	62	52.542	ENSHCOG00000004151	PABPN1L	74	51.852	Hippocampus_comes
ENSMMUG00000012438	PABPN1L	59	55.280	ENSIPUG00000023583	PABPN1L	90	55.026	Ictalurus_punctatus
ENSMMUG00000012438	PABPN1L	100	68.929	ENSSTOG00000020814	PABPN1L	100	67.742	Ictidomys_tridecemlineatus
ENSMMUG00000012438	PABPN1L	100	69.928	ENSJJAG00000006433	Pabpn1l	100	68.000	Jaculus_jaculus
ENSMMUG00000012438	PABPN1L	59	53.614	ENSLBEG00000011647	PABPN1L	69	53.140	Labrus_bergylta
ENSMMUG00000012438	PABPN1L	70	65.641	ENSLAFG00000025902	-	78	65.641	Loxodonta_africana
ENSMMUG00000012438	PABPN1L	100	98.909	ENSMFAG00000002924	PABPN1L	100	98.909	Macaca_fascicularis
ENSMMUG00000012438	PABPN1L	100	98.545	ENSMNEG00000044808	PABPN1L	100	98.545	Macaca_nemestrina
ENSMMUG00000012438	PABPN1L	100	97.189	ENSMLEG00000032667	PABPN1L	100	97.189	Mandrillus_leucophaeus
ENSMMUG00000012438	PABPN1L	73	51.500	ENSMZEG00005002186	PABPN1L	71	52.000	Maylandia_zebra
ENSMMUG00000012438	PABPN1L	100	68.727	ENSMAUG00000014032	Pabpn1l	100	68.441	Mesocricetus_auratus
ENSMMUG00000012438	PABPN1L	100	76.449	ENSMICG00000028179	PABPN1L	100	76.364	Microcebus_murinus
ENSMMUG00000012438	PABPN1L	100	67.391	ENSMOCG00000007955	Pabpn1l	100	64.727	Microtus_ochrogaster
ENSMMUG00000012438	PABPN1L	100	54.839	ENSMODG00000003873	-	100	51.971	Monodelphis_domestica
ENSMMUG00000012438	PABPN1L	61	55.814	ENSMALG00000016926	PABPN1L	71	52.913	Monopterus_albus
ENSMMUG00000012438	PABPN1L	100	65.942	MGP_CAROLIEiJ_G0031670	Pabpn1l	100	64.364	Mus_caroli
ENSMMUG00000012438	PABPN1L	100	65.580	ENSMUSG00000069867	Pabpn1l	100	64.000	Mus_musculus
ENSMMUG00000012438	PABPN1L	100	66.667	MGP_PahariEiJ_G0023268	Pabpn1l	100	64.727	Mus_pahari
ENSMMUG00000012438	PABPN1L	100	65.217	MGP_SPRETEiJ_G0032788	Pabpn1l	100	63.636	Mus_spretus
ENSMMUG00000012438	PABPN1L	96	52.174	ENSMLUG00000003228	PABPN1L	95	50.909	Myotis_lucifugus
ENSMMUG00000012438	PABPN1L	100	72.464	ENSNGAG00000023992	Pabpn1l	100	69.818	Nannospalax_galili
ENSMMUG00000012438	PABPN1L	54	59.333	ENSNBRG00000017078	PABPN1L	73	52.973	Neolamprologus_brichardi
ENSMMUG00000012438	PABPN1L	100	69.314	ENSOPRG00000005597	PABPN1L	100	68.478	Ochotona_princeps
ENSMMUG00000012438	PABPN1L	100	62.630	ENSODEG00000004649	PABPN1L	100	62.153	Octodon_degus
ENSMMUG00000012438	PABPN1L	100	53.091	ENSOANG00000013901	PABPN1L	100	53.957	Ornithorhynchus_anatinus
ENSMMUG00000012438	PABPN1L	73	52.500	ENSORLG00000026560	PABPN1L	71	51.741	Oryzias_latipes
ENSMMUG00000012438	PABPN1L	73	52.500	ENSORLG00020015068	PABPN1L	71	51.741	Oryzias_latipes_hni
ENSMMUG00000012438	PABPN1L	73	52.500	ENSORLG00015000397	PABPN1L	71	51.741	Oryzias_latipes_hsok
ENSMMUG00000012438	PABPN1L	77	50.472	ENSOMEG00000017896	PABPN1L	53	50.472	Oryzias_melastigma
ENSMMUG00000012438	PABPN1L	100	77.536	ENSOGAG00000000433	PABPN1L	100	76.277	Otolemur_garnettii
ENSMMUG00000012438	PABPN1L	100	64.803	ENSOARG00000013682	PABPN1L	100	64.821	Ovis_aries
ENSMMUG00000012438	PABPN1L	100	90.647	ENSPPAG00000028866	PABPN1L	100	91.727	Pan_paniscus
ENSMMUG00000012438	PABPN1L	100	70.863	ENSPPRG00000015106	PABPN1L	100	70.863	Panthera_pardus
ENSMMUG00000012438	PABPN1L	93	65.234	ENSPTIG00000015606	PABPN1L	100	65.234	Panthera_tigris_altaica
ENSMMUG00000012438	PABPN1L	100	90.647	ENSPTRG00000031120	PABPN1L	100	91.727	Pan_troglodytes
ENSMMUG00000012438	PABPN1L	100	97.091	ENSPANG00000026039	PABPN1L	100	97.177	Papio_anubis
ENSMMUG00000012438	PABPN1L	70	56.345	ENSPSIG00000003404	PABPN1L	100	58.376	Pelodiscus_sinensis
ENSMMUG00000012438	PABPN1L	100	70.652	ENSPEMG00000016624	Pabpn1l	100	68.364	Peromyscus_maniculatus_bairdii
ENSMMUG00000012438	PABPN1L	52	64.583	ENSPCIG00000007038	-	100	64.583	Phascolarctos_cinereus
ENSMMUG00000012438	PABPN1L	59	53.614	ENSPFOG00000007001	PABPN1L	89	45.455	Poecilia_formosa
ENSMMUG00000012438	PABPN1L	59	53.614	ENSPLAG00000018431	PABPN1L	71	53.140	Poecilia_latipinna
ENSMMUG00000012438	PABPN1L	59	53.614	ENSPMEG00000009108	PABPN1L	71	53.140	Poecilia_mexicana
ENSMMUG00000012438	PABPN1L	100	89.568	ENSPPYG00000007655	PABPN1L	100	90.288	Pongo_abelii
ENSMMUG00000012438	PABPN1L	100	73.818	ENSPCOG00000024077	PABPN1L	100	73.818	Propithecus_coquereli
ENSMMUG00000012438	PABPN1L	100	67.972	ENSPVAG00000002716	PABPN1L	100	66.548	Pteropus_vampyrus
ENSMMUG00000012438	PABPN1L	73	51.500	ENSPNYG00000004803	PABPN1L	71	52.000	Pundamilia_nyererei
ENSMMUG00000012438	PABPN1L	100	69.203	ENSRNOG00000029558	Pabpn1l	100	67.273	Rattus_norvegicus
ENSMMUG00000012438	PABPN1L	100	94.909	ENSRBIG00000030740	PABPN1L	100	94.909	Rhinopithecus_bieti
ENSMMUG00000012438	PABPN1L	100	94.545	ENSRROG00000032240	-	100	94.545	Rhinopithecus_roxellana
ENSMMUG00000012438	PABPN1L	99	95.255	ENSRROG00000035483	-	99	95.255	Rhinopithecus_roxellana
ENSMMUG00000012438	PABPN1L	100	82.246	ENSSBOG00000018410	PABPN1L	100	82.609	Saimiri_boliviensis_boliviensis
ENSMMUG00000012438	PABPN1L	100	52.203	ENSSHAG00000010001	-	100	51.525	Sarcophilus_harrisii
ENSMMUG00000012438	PABPN1L	59	53.704	ENSSMAG00000021348	PABPN1L	72	51.707	Scophthalmus_maximus
ENSMMUG00000012438	PABPN1L	59	53.614	ENSSDUG00000006986	PABPN1L	71	52.657	Seriola_dumerili
ENSMMUG00000012438	PABPN1L	59	54.217	ENSSLDG00000021845	PABPN1L	71	53.140	Seriola_lalandi_dorsalis
ENSMMUG00000012438	PABPN1L	89	52.869	ENSSARG00000005178	-	96	52.049	Sorex_araneus
ENSMMUG00000012438	PABPN1L	70	59.896	ENSSPUG00000007031	PABPN1L	84	60.104	Sphenodon_punctatus
ENSMMUG00000012438	PABPN1L	73	51.707	ENSSPAG00000017978	PABPN1L	71	53.398	Stegastes_partitus
ENSMMUG00000012438	PABPN1L	100	68.100	ENSSSCG00000036367	PABPN1L	100	67.025	Sus_scrofa
ENSMMUG00000012438	PABPN1L	59	54.819	ENSTRUG00000024725	PABPN1L	81	53.140	Takifugu_rubripes
ENSMMUG00000012438	PABPN1L	100	67.986	ENSTTRG00000004691	PABPN1L	100	67.986	Tursiops_truncatus
ENSMMUG00000012438	PABPN1L	59	52.542	ENSXETG00000011258	pabpn1l	96	51.818	Xenopus_tropicalis