EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000012723 (Gene tree)
Gene ID: 720557
Gene Symbol: MBD4
Alias: MED1
Full Name: methyl-CpG binding domain 4%2C DNA glycosylase
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 8990 bases
Position: chr2:50679242-50688231
Accession: 720557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000053289	MBD	PF01429.19	6.5e-21	1	1
ENSMMUP00000016705	MBD	PF01429.19	6.8e-21	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000017841	MBD4-203	783	-	ENSMMUP00000016707	260 (aa)	-	H9H3K7
ENSMMUT00000017839	MBD4-201	1743	XM_015130159	ENSMMUP00000016705	580 (aa)	XP_014985645	H9H3K6
ENSMMUT00000077997	MBD4-202	1509	-	ENSMMUP00000053289	502 (aa)	-	A0A1D5QZ07

Gene Model

Click here to download ENSMMUG00000012723's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03410	Base excision repair	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012723's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012723	MBD4	100	92.453	ENSG00000129071	MBD4	100	92.453	Homo_sapiens
ENSMMUG00000012723	MBD4	99	74.957	ENSAMEG00000004562	MBD4	99	74.957	Ailuropoda_melanoleuca
ENSMMUG00000012723	MBD4	54	58.367	ENSAOCG00000001157	mbd4	62	58.367	Amphiprion_ocellaris
ENSMMUG00000012723	MBD4	99	70.209	ENSBTAG00000021645	MBD4	99	70.209	Bos_taurus
ENSMMUG00000012723	MBD4	100	86.059	ENSCJAG00000017293	MBD4	100	86.059	Callithrix_jacchus
ENSMMUG00000012723	MBD4	99	75.260	ENSCAFG00000004867	MBD4	99	75.260	Canis_familiaris
ENSMMUG00000012723	MBD4	99	75.260	ENSCAFG00020007082	MBD4	99	75.260	Canis_lupus_dingo
ENSMMUG00000012723	MBD4	99	68.990	ENSCHIG00000009760	MBD4	99	68.990	Capra_hircus
ENSMMUG00000012723	MBD4	100	86.919	ENSCCAG00000029796	MBD4	100	86.919	Cebus_capucinus
ENSMMUG00000012723	MBD4	100	96.813	ENSCATG00000035211	MBD4	100	96.813	Cercocebus_atys
ENSMMUG00000012723	MBD4	98	68.421	ENSCLAG00000008974	MBD4	99	68.070	Chinchilla_lanigera
ENSMMUG00000012723	MBD4	100	95.517	ENSCSAG00000009037	MBD4	100	95.517	Chlorocebus_sabaeus
ENSMMUG00000012723	MBD4	65	87.023	ENSCPBG00000014704	MBD4	60	87.023	Chrysemys_picta_bellii
ENSMMUG00000012723	MBD4	100	94.828	ENSCANG00000007120	MBD4	100	94.828	Colobus_angolensis_palliatus
ENSMMUG00000012723	MBD4	99	66.899	ENSCGRG00001003507	Mbd4	99	66.899	Cricetulus_griseus_chok1gshd
ENSMMUG00000012723	MBD4	99	66.899	ENSCGRG00000010974	Mbd4	99	66.899	Cricetulus_griseus_crigri
ENSMMUG00000012723	MBD4	99	76.000	ENSDNOG00000049619	MBD4	99	76.000	Dasypus_novemcinctus
ENSMMUG00000012723	MBD4	81	63.113	ENSDORG00000000902	-	95	63.113	Dipodomys_ordii
ENSMMUG00000012723	MBD4	99	78.049	ENSEASG00005014800	MBD4	99	78.049	Equus_asinus_asinus
ENSMMUG00000012723	MBD4	99	78.049	ENSECAG00000022106	MBD4	99	78.049	Equus_caballus
ENSMMUG00000012723	MBD4	95	60.254	ENSEEUG00000011459	MBD4	99	60.254	Erinaceus_europaeus
ENSMMUG00000012723	MBD4	99	76.552	ENSFCAG00000000083	MBD4	99	76.552	Felis_catus
ENSMMUG00000012723	MBD4	82	44.040	ENSFALG00000013663	MBD4	99	44.118	Ficedula_albicollis
ENSMMUG00000012723	MBD4	70	87.786	ENSGAGG00000018644	MBD4	65	87.786	Gopherus_agassizii
ENSMMUG00000012723	MBD4	100	91.938	ENSGGOG00000010698	MBD4	100	91.938	Gorilla_gorilla
ENSMMUG00000012723	MBD4	98	71.579	ENSHGLG00000009034	MBD4	99	71.579	Heterocephalus_glaber_female
ENSMMUG00000012723	MBD4	98	71.579	ENSHGLG00100000135	MBD4	99	71.579	Heterocephalus_glaber_male
ENSMMUG00000012723	MBD4	99	71.304	ENSSTOG00000020663	MBD4	99	71.304	Ictidomys_tridecemlineatus
ENSMMUG00000012723	MBD4	99	74.177	ENSLAFG00000010609	MBD4	99	74.177	Loxodonta_africana
ENSMMUG00000012723	MBD4	100	99.801	ENSMFAG00000002266	MBD4	100	99.801	Macaca_fascicularis
ENSMMUG00000012723	MBD4	96	99.101	ENSMNEG00000029752	MBD4	99	99.163	Macaca_nemestrina
ENSMMUG00000012723	MBD4	100	96.614	ENSMLEG00000024859	MBD4	100	96.614	Mandrillus_leucophaeus
ENSMMUG00000012723	MBD4	100	79.518	ENSMICG00000008022	MBD4	100	79.518	Microcebus_murinus
ENSMMUG00000012723	MBD4	75	50.394	ENSMOCG00000002466	-	99	49.869	Microtus_ochrogaster
ENSMMUG00000012723	MBD4	86	58.893	ENSMODG00000006399	-	99	58.929	Monodelphis_domestica
ENSMMUG00000012723	MBD4	99	66.202	MGP_CAROLIEiJ_G0028760	Mbd4	99	66.202	Mus_caroli
ENSMMUG00000012723	MBD4	99	66.376	ENSMUSG00000030322	Mbd4	99	66.376	Mus_musculus
ENSMMUG00000012723	MBD4	99	67.304	MGP_PahariEiJ_G0022511	-	99	67.304	Mus_pahari
ENSMMUG00000012723	MBD4	99	65.679	MGP_SPRETEiJ_G0029788	Mbd4	99	65.679	Mus_spretus
ENSMMUG00000012723	MBD4	99	73.830	ENSMPUG00000017195	MBD4	99	73.830	Mustela_putorius_furo
ENSMMUG00000012723	MBD4	93	78.439	ENSMLUG00000014766	MBD4	97	78.679	Myotis_lucifugus
ENSMMUG00000012723	MBD4	100	91.910	ENSNLEG00000005337	MBD4	100	91.910	Nomascus_leucogenys
ENSMMUG00000012723	MBD4	99	63.855	ENSOPRG00000000473	MBD4	99	63.855	Ochotona_princeps
ENSMMUG00000012723	MBD4	85	39.205	ENSONIG00000017212	mbd4	100	39.394	Oreochromis_niloticus
ENSMMUG00000012723	MBD4	72	45.476	ENSOANG00000004589	-	89	47.739	Ornithorhynchus_anatinus
ENSMMUG00000012723	MBD4	99	66.267	ENSOCUG00000013006	MBD4	100	66.267	Oryctolagus_cuniculus
ENSMMUG00000012723	MBD4	99	75.000	ENSOGAG00000010236	MBD4	99	74.653	Otolemur_garnettii
ENSMMUG00000012723	MBD4	99	69.164	ENSOARG00000014699	MBD4	99	69.164	Ovis_aries
ENSMMUG00000012723	MBD4	100	91.081	ENSPPAG00000036528	MBD4	100	91.081	Pan_paniscus
ENSMMUG00000012723	MBD4	99	75.517	ENSPPRG00000016480	MBD4	99	75.517	Panthera_pardus
ENSMMUG00000012723	MBD4	100	91.938	ENSPTRG00000015377	MBD4	100	91.938	Pan_troglodytes
ENSMMUG00000012723	MBD4	100	97.410	ENSPANG00000015047	MBD4	100	97.410	Papio_anubis
ENSMMUG00000012723	MBD4	65	83.824	ENSPSIG00000007892	MBD4	59	83.824	Pelodiscus_sinensis
ENSMMUG00000012723	MBD4	90	61.143	ENSPEMG00000006226	Mbd4	97	61.143	Peromyscus_maniculatus_bairdii
ENSMMUG00000012723	MBD4	89	57.786	ENSPCIG00000002276	-	98	57.786	Phascolarctos_cinereus
ENSMMUG00000012723	MBD4	100	90.361	ENSPPYG00000013417	MBD4	100	90.361	Pongo_abelii
ENSMMUG00000012723	MBD4	95	70.397	ENSPCAG00000012915	MBD4	99	70.397	Procavia_capensis
ENSMMUG00000012723	MBD4	99	77.414	ENSPVAG00000005238	MBD4	99	77.069	Pteropus_vampyrus
ENSMMUG00000012723	MBD4	99	66.205	ENSRNOG00000010919	Mbd4	99	66.205	Rattus_norvegicus
ENSMMUG00000012723	MBD4	100	97.012	ENSRBIG00000027722	MBD4	100	97.012	Rhinopithecus_bieti
ENSMMUG00000012723	MBD4	100	96.614	ENSRROG00000029136	MBD4	100	96.614	Rhinopithecus_roxellana
ENSMMUG00000012723	MBD4	99	87.370	ENSSBOG00000016810	MBD4	100	86.851	Saimiri_boliviensis_boliviensis
ENSMMUG00000012723	MBD4	93	56.000	ENSSHAG00000012953	MBD4	92	56.377	Sarcophilus_harrisii
ENSMMUG00000012723	MBD4	52	77.692	ENSSFOG00015016292	mbd4	95	42.885	Scleropages_formosus
ENSMMUG00000012723	MBD4	81	61.325	ENSSARG00000004496	-	80	61.325	Sorex_araneus
ENSMMUG00000012723	MBD4	69	86.154	ENSSPUG00000017344	MBD4	67	86.154	Sphenodon_punctatus
ENSMMUG00000012723	MBD4	99	74.435	ENSSSCG00000033303	MBD4	99	74.435	Sus_scrofa
ENSMMUG00000012723	MBD4	83	38.478	ENSTNIG00000017927	mbd4	55	67.416	Tetraodon_nigroviridis
ENSMMUG00000012723	MBD4	95	60.550	ENSTBEG00000003041	-	88	60.550	Tupaia_belangeri
ENSMMUG00000012723	MBD4	97	75.088	ENSTTRG00000011265	MBD4	100	75.088	Tursiops_truncatus
ENSMMUG00000012723	MBD4	86	78.044	ENSUAMG00000000814	MBD4	99	78.044	Ursus_americanus
ENSMMUG00000012723	MBD4	99	76.132	ENSUMAG00000017542	MBD4	99	76.132	Ursus_maritimus
ENSMMUG00000012723	MBD4	60	95.238	ENSVPAG00000004040	-	55	95.238	Vicugna_pacos
ENSMMUG00000012723	MBD4	99	74.740	ENSVVUG00000014222	MBD4	99	74.740	Vulpes_vulpes
ENSMMUG00000012723	MBD4	83	43.207	ENSXETG00000026622	mbd4	89	42.731	Xenopus_tropicalis