EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000012884 (Gene tree)
Gene ID: 714852
Gene Symbol: ALYREF
Alias: THOC4
Full Name: Aly/REF export factor
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 3808 bases
Position: chr16:75718520-75722327
Accession: 714852
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000016923	RRM_1	PF00076.22	2e-13	1	1
ENSMMUP00000042995	RRM_1	PF00076.22	2.2e-13	1	1
ENSMMUP00000052142	RRM_1	PF00076.22	1.7e-12	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000070344	-	834	-	ENSMMUP00000042995	277 (aa)	-	A0A1D5Q4N1
ENSMMUT00000018076	-	960	-	ENSMMUP00000016923	264 (aa)	-	F6S9B3
ENSMMUT00000074560	-	570	-	ENSMMUP00000052142	189 (aa)	-	A0A1D5QVR2

Gene Model

Click here to download ENSMMUG00000012884's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03013	RNA transport	KEGG
mcc03015	mRNA surveillance pathway	KEGG
mcc03040	Spliceosome	KEGG
mcc05168	Herpes simplex virus 1 infection	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000012884's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000012884	ALYREF	100	99.242	ENSG00000183684	ALYREF	100	99.242	Homo_sapiens
ENSMMUG00000012884	ALYREF	97	68.345	ENSAPOG00000018455	ALYREF	100	72.302	Acanthochromis_polyacanthus
ENSMMUG00000012884	ALYREF	78	86.190	ENSAMEG00000017463	ALYREF	74	91.848	Ailuropoda_melanoleuca
ENSMMUG00000012884	ALYREF	97	75.954	ENSACAG00000010526	ALYREF	100	74.427	Anolis_carolinensis
ENSMMUG00000012884	ALYREF	100	81.818	ENSANAG00000028229	-	80	84.848	Aotus_nancymaae
ENSMMUG00000012884	ALYREF	67	97.740	ENSANAG00000022638	-	75	97.740	Aotus_nancymaae
ENSMMUG00000012884	ALYREF	97	98.054	ENSBTAG00000008498	ALYREF	100	98.054	Bos_taurus
ENSMMUG00000012884	ALYREF	100	98.485	ENSCJAG00000039942	ALYREF	100	98.485	Callithrix_jacchus
ENSMMUG00000012884	ALYREF	97	98.054	ENSCAFG00000005877	ALYREF	100	98.054	Canis_familiaris
ENSMMUG00000012884	ALYREF	97	98.054	ENSCAFG00020009815	ALYREF	100	98.054	Canis_lupus_dingo
ENSMMUG00000012884	ALYREF	97	97.287	ENSCHIG00000017396	ALYREF	97	97.287	Capra_hircus
ENSMMUG00000012884	ALYREF	85	82.684	ENSTSYG00000002272	ALYREF	69	98.857	Carlito_syrichta
ENSMMUG00000012884	ALYREF	51	96.269	ENSCAPG00000014727	-	100	96.269	Cavia_aperea
ENSMMUG00000012884	ALYREF	97	96.887	ENSCPOG00000013710	ALYREF	100	96.887	Cavia_porcellus
ENSMMUG00000012884	ALYREF	100	98.864	ENSCCAG00000020578	-	100	98.864	Cebus_capucinus
ENSMMUG00000012884	ALYREF	93	85.143	ENSCCAG00000030237	-	100	73.152	Cebus_capucinus
ENSMMUG00000012884	ALYREF	100	100.000	ENSCATG00000033169	ALYREF	100	100.000	Cercocebus_atys
ENSMMUG00000012884	ALYREF	97	88.327	ENSCLAG00000015026	ALYREF	100	88.327	Chinchilla_lanigera
ENSMMUG00000012884	ALYREF	100	100.000	ENSCSAG00000002216	ALYREF	100	100.000	Chlorocebus_sabaeus
ENSMMUG00000012884	ALYREF	69	96.685	ENSCANG00000034056	ALYREF	89	90.395	Colobus_angolensis_palliatus
ENSMMUG00000012884	ALYREF	97	94.163	ENSCGRG00001018191	-	100	92.218	Cricetulus_griseus_chok1gshd
ENSMMUG00000012884	ALYREF	72	91.623	ENSCGRG00000015871	-	90	87.097	Cricetulus_griseus_crigri
ENSMMUG00000012884	ALYREF	100	51.777	ENSCSEG00000015438	-	98	54.187	Cynoglossus_semilaevis
ENSMMUG00000012884	ALYREF	67	96.067	ENSDNOG00000002563	ALYREF	75	96.067	Dasypus_novemcinctus
ENSMMUG00000012884	ALYREF	85	83.111	ENSDORG00000025849	-	73	96.667	Dipodomys_ordii
ENSMMUG00000012884	ALYREF	67	93.820	ENSETEG00000016596	ALYREF	100	93.258	Echinops_telfairi
ENSMMUG00000012884	ALYREF	100	96.970	ENSEASG00005005824	ALYREF	98	96.970	Equus_asinus_asinus
ENSMMUG00000012884	ALYREF	100	96.970	ENSECAG00000018754	ALYREF	98	96.970	Equus_caballus
ENSMMUG00000012884	ALYREF	91	97.093	ENSEEUG00000010164	ALYREF	100	97.093	Erinaceus_europaeus
ENSMMUG00000012884	ALYREF	99	97.710	ENSFCAG00000022549	ALYREF	99	97.710	Felis_catus
ENSMMUG00000012884	ALYREF	81	86.047	ENSFDAG00000001213	ALYREF	93	86.893	Fukomys_damarensis
ENSMMUG00000012884	ALYREF	97	84.170	ENSGALG00000007237	ALYREF	100	83.784	Gallus_gallus
ENSMMUG00000012884	ALYREF	97	70.566	ENSGACG00000013328	ALYREF	100	72.556	Gasterosteus_aculeatus
ENSMMUG00000012884	ALYREF	97	83.206	ENSGAGG00000008536	ALYREF	100	82.443	Gopherus_agassizii
ENSMMUG00000012884	ALYREF	100	99.621	ENSGGOG00000013935	ALYREF	100	99.621	Gorilla_gorilla
ENSMMUG00000012884	ALYREF	100	97.354	ENSHGLG00000008293	ALYREF	100	97.354	Heterocephalus_glaber_female
ENSMMUG00000012884	ALYREF	78	81.057	ENSHGLG00100006949	ALYREF	77	93.923	Heterocephalus_glaber_male
ENSMMUG00000012884	ALYREF	97	68.165	ENSHCOG00000015046	ALYREF	100	69.485	Hippocampus_comes
ENSMMUG00000012884	ALYREF	97	93.774	ENSJJAG00000004134	-	100	93.774	Jaculus_jaculus
ENSMMUG00000012884	ALYREF	97	70.833	ENSLACG00000005694	ALYREF	100	71.970	Latimeria_chalumnae
ENSMMUG00000012884	ALYREF	71	94.681	ENSLAFG00000003083	ALYREF	98	93.478	Loxodonta_africana
ENSMMUG00000012884	ALYREF	100	97.348	ENSMFAG00000001394	ALYREF	100	97.348	Macaca_fascicularis
ENSMMUG00000012884	ALYREF	100	100.000	ENSMNEG00000043666	ALYREF	100	100.000	Macaca_nemestrina
ENSMMUG00000012884	ALYREF	70	88.421	ENSMLEG00000043353	ALYREF	88	85.417	Mandrillus_leucophaeus
ENSMMUG00000012884	ALYREF	97	78.988	ENSMAUG00000020552	-	100	76.744	Mesocricetus_auratus
ENSMMUG00000012884	ALYREF	100	98.413	ENSMICG00000017403	ALYREF	100	98.413	Microcebus_murinus
ENSMMUG00000012884	ALYREF	97	82.955	ENSMOCG00000016792	-	100	81.818	Microtus_ochrogaster
ENSMMUG00000012884	ALYREF	97	96.109	ENSMODG00000003030	ALYREF	84	96.109	Monodelphis_domestica
ENSMMUG00000012884	ALYREF	97	69.455	ENSMALG00000019408	ALYREF	100	72.364	Monopterus_albus
ENSMMUG00000012884	ALYREF	97	96.109	MGP_CAROLIEiJ_G0017529	Alyref	100	96.109	Mus_caroli
ENSMMUG00000012884	ALYREF	97	73.541	MGP_CAROLIEiJ_G0014874	Alyref2	100	70.428	Mus_caroli
ENSMMUG00000012884	ALYREF	91	65.698	ENSMUSG00000112856	Gm4305	63	64.706	Mus_musculus
ENSMMUG00000012884	ALYREF	98	61.538	ENSMUSG00000095022	Gm20765	100	53.521	Mus_musculus
ENSMMUG00000012884	ALYREF	97	61.754	ENSMUSG00000097550	Gm21304	100	53.521	Mus_musculus
ENSMMUG00000012884	ALYREF	91	63.953	ENSMUSG00000094314	Gm4301	63	63.235	Mus_musculus
ENSMMUG00000012884	ALYREF	91	65.698	ENSMUSG00000091101	Gm4302	62	64.706	Mus_musculus
ENSMMUG00000012884	ALYREF	97	61.278	ENSMUSG00000086727	4931428L18Rik	100	57.955	Mus_musculus
ENSMMUG00000012884	ALYREF	91	63.953	ENSMUSG00000096640	Gm4312	63	63.235	Mus_musculus
ENSMMUG00000012884	ALYREF	97	73.643	ENSMUSG00000060244	Alyref2	100	72.093	Mus_musculus
ENSMMUG00000012884	ALYREF	98	61.538	ENSMUSG00000094144	Gm21312	100	53.521	Mus_musculus
ENSMMUG00000012884	ALYREF	91	65.698	ENSMUSG00000096744	Gm4307	63	64.706	Mus_musculus
ENSMMUG00000012884	ALYREF	98	61.538	ENSMUSG00000097878	Gm8764	99	59.880	Mus_musculus
ENSMMUG00000012884	ALYREF	91	65.698	ENSMUSG00000112931	Gm4303	63	64.706	Mus_musculus
ENSMMUG00000012884	ALYREF	97	96.109	ENSMUSG00000025134	Alyref	100	96.109	Mus_musculus
ENSMMUG00000012884	ALYREF	98	60.690	ENSMUSG00000090854	Gm4340	100	52.431	Mus_musculus
ENSMMUG00000012884	ALYREF	97	60.902	ENSMUSG00000117091	AC153137.1	100	57.197	Mus_musculus
ENSMMUG00000012884	ALYREF	98	61.538	ENSMUSG00000097427	Gm6763	99	59.880	Mus_musculus
ENSMMUG00000012884	ALYREF	97	61.754	ENSMUSG00000091779	Gm21293	100	53.521	Mus_musculus
ENSMMUG00000012884	ALYREF	97	96.109	MGP_PahariEiJ_G0018655	-	100	96.109	Mus_pahari
ENSMMUG00000012884	ALYREF	91	63.953	MGP_PahariEiJ_G0027255	-	82	65.700	Mus_pahari
ENSMMUG00000012884	ALYREF	91	63.953	MGP_PahariEiJ_G0027254	-	84	65.700	Mus_pahari
ENSMMUG00000012884	ALYREF	95	92.737	MGP_PahariEiJ_G0018656	-	99	97.354	Mus_pahari
ENSMMUG00000012884	ALYREF	97	73.256	MGP_SPRETEiJ_G0015679	Alyref2	100	71.705	Mus_spretus
ENSMMUG00000012884	ALYREF	55	72.115	MGP_SPRETEiJ_G0016590	-	55	77.419	Mus_spretus
ENSMMUG00000012884	ALYREF	97	96.109	MGP_SPRETEiJ_G0018373	Alyref	100	96.109	Mus_spretus
ENSMMUG00000012884	ALYREF	95	70.238	ENSMLUG00000027516	-	81	65.517	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	95	61.111	ENSMLUG00000024447	-	76	61.111	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	59.239	ENSMLUG00000022869	-	71	62.802	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	61.749	ENSMLUG00000030407	-	77	60.392	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	63.388	ENSMLUG00000025677	-	77	61.569	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	55.978	ENSMLUG00000015043	-	98	52.896	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	57.065	ENSMLUG00000024471	-	82	53.257	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	90	62.791	ENSMLUG00000023213	-	72	53.476	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	61.749	ENSMLUG00000026271	-	79	62.151	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	65.946	ENSMLUG00000002626	-	98	65.891	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	95	62.698	ENSMLUG00000027352	-	77	62.302	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	82	58.904	ENSMLUG00000028343	-	85	64.607	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	80	82.710	ENSMLUG00000009555	-	66	92.697	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	97	60.656	ENSMLUG00000024976	-	79	59.684	Myotis_lucifugus
ENSMMUG00000012884	ALYREF	100	99.621	ENSNLEG00000010313	ALYREF	100	99.621	Nomascus_leucogenys
ENSMMUG00000012884	ALYREF	80	74.762	ENSMEUG00000002210	ALYREF	92	74.762	Notamacropus_eugenii
ENSMMUG00000012884	ALYREF	51	91.791	ENSOPRG00000005551	-	52	90.299	Ochotona_princeps
ENSMMUG00000012884	ALYREF	97	96.154	ENSODEG00000008359	ALYREF	100	96.154	Octodon_degus
ENSMMUG00000012884	ALYREF	97	69.091	ENSORLG00000012331	ALYREF	100	71.636	Oryzias_latipes
ENSMMUG00000012884	ALYREF	75	89.899	ENSOGAG00000012409	ALYREF	76	94.444	Otolemur_garnettii
ENSMMUG00000012884	ALYREF	67	97.753	ENSOARG00000017932	ALYREF	67	97.753	Ovis_aries
ENSMMUG00000012884	ALYREF	99	97.710	ENSPPRG00000010829	ALYREF	99	97.710	Panthera_pardus
ENSMMUG00000012884	ALYREF	55	97.931	ENSPTIG00000006399	ALYREF	81	97.931	Panthera_tigris_altaica
ENSMMUG00000012884	ALYREF	100	99.621	ENSPTRG00000009774	ALYREF	100	99.621	Pan_troglodytes
ENSMMUG00000012884	ALYREF	100	100.000	ENSPANG00000019265	ALYREF	100	100.000	Papio_anubis
ENSMMUG00000012884	ALYREF	50	92.481	ENSPSIG00000017541	ALYREF	98	93.985	Pelodiscus_sinensis
ENSMMUG00000012884	ALYREF	100	99.242	ENSPPYG00000008749	ALYREF	100	99.242	Pongo_abelii
ENSMMUG00000012884	ALYREF	100	98.413	ENSPCOG00000020874	ALYREF	100	98.413	Propithecus_coquereli
ENSMMUG00000012884	ALYREF	97	79.377	ENSPVAG00000017866	ALYREF	100	79.377	Pteropus_vampyrus
ENSMMUG00000012884	ALYREF	100	97.354	ENSRNOG00000036687	Alyref	100	97.354	Rattus_norvegicus
ENSMMUG00000012884	ALYREF	69	96.685	ENSRBIG00000039651	ALYREF	74	96.685	Rhinopithecus_bieti
ENSMMUG00000012884	ALYREF	88	92.241	ENSRROG00000045364	ALYREF	83	98.104	Rhinopithecus_roxellana
ENSMMUG00000012884	ALYREF	73	93.264	ENSSHAG00000010459	ALYREF	95	95.109	Sarcophilus_harrisii
ENSMMUG00000012884	ALYREF	97	52.158	ENSSDUG00000003992	-	100	53.381	Seriola_dumerili
ENSMMUG00000012884	ALYREF	97	53.091	ENSSLDG00000005386	-	100	53.957	Seriola_lalandi_dorsalis
ENSMMUG00000012884	ALYREF	97	82.443	ENSSPUG00000004600	ALYREF	100	80.534	Sphenodon_punctatus
ENSMMUG00000012884	ALYREF	97	68.459	ENSSPAG00000011178	ALYREF	97	70.251	Stegastes_partitus
ENSMMUG00000012884	ALYREF	97	98.054	ENSSSCG00000032655	ALYREF	100	98.054	Sus_scrofa
ENSMMUG00000012884	ALYREF	50	93.939	ENSTGUG00000003513	ALYREF	98	94.697	Taeniopygia_guttata
ENSMMUG00000012884	ALYREF	97	69.485	ENSTRUG00000008828	ALYREF	100	68.266	Takifugu_rubripes
ENSMMUG00000012884	ALYREF	67	96.067	ENSTBEG00000005834	ALYREF	100	96.067	Tupaia_belangeri
ENSMMUG00000012884	ALYREF	97	96.109	ENSTTRG00000012275	ALYREF	100	96.109	Tursiops_truncatus
ENSMMUG00000012884	ALYREF	67	83.051	ENSUAMG00000016931	ALYREF	66	81.921	Ursus_americanus
ENSMMUG00000012884	ALYREF	67	83.051	ENSUMAG00000016384	ALYREF	65	81.921	Ursus_maritimus
ENSMMUG00000012884	ALYREF	97	75.581	ENSXETG00000005391	alyref	100	73.745	Xenopus_tropicalis