EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000013008 (Gene tree)
Gene ID: 701235
Gene Symbol: CSTF2
Alias: CstF-64
Full Name: cleavage stimulation factor subunit 2
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Plus strand
Length: 22069 bases
Position: chrX:95006368-95028436
Accession: 701235
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000051849	RRM_1	PF00076.22	2e-25	1	1
ENSMMUP00000053263	RRM_1	PF00076.22	2.2e-25	1	1
ENSMMUP00000017078	RRM_1	PF00076.22	2.6e-25	1	1
ENSMMUP00000055362	RRM_1	PF00076.22	5.8e-24	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000018243	CSTF2-203	1779	-	ENSMMUP00000017078	592 (aa)	-	F7HR34
ENSMMUT00000054002	CSTF2-204	1659	-	ENSMMUP00000051849	552 (aa)	-	A0A1D5QUW9
ENSMMUT00000073042	CSTF2-202	1782	XM_001089558	ENSMMUP00000053263	593 (aa)	XP_001089558	A0A1D5QYY1
ENSMMUT00000073319	CSTF2-201	2535	XM_015127801	ENSMMUP00000055362	569 (aa)	XP_014983287	A0A1D5R4X5

Gene Model

Click here to download ENSMMUG00000013008's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03015	mRNA surveillance pathway	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000013008's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000013008	CSTF2	58	61.408	ENSMMUG00000042906	-	99	61.972

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000013008	CSTF2	100	98.827	ENSG00000101811	CSTF2	100	98.827	Homo_sapiens
ENSMMUG00000013008	CSTF2	99	61.239	ENSAPOG00000005630	cstf2	97	61.484	Acanthochromis_polyacanthus
ENSMMUG00000013008	CSTF2	100	95.033	ENSAMEG00000002082	CSTF2	100	95.033	Ailuropoda_melanoleuca
ENSMMUG00000013008	CSTF2	86	80.258	ENSACIG00000012852	cstf2	96	59.785	Amphilophus_citrinellus
ENSMMUG00000013008	CSTF2	99	60.568	ENSAOCG00000020905	cstf2	97	61.661	Amphiprion_ocellaris
ENSMMUG00000013008	CSTF2	99	60.568	ENSAPEG00000006526	cstf2	97	61.661	Amphiprion_percula
ENSMMUG00000013008	CSTF2	84	80.247	ENSATEG00000018186	cstf2	97	59.649	Anabas_testudineus
ENSMMUG00000013008	CSTF2	97	78.974	ENSAPLG00000007255	CSTF2	98	78.511	Anas_platyrhynchos
ENSMMUG00000013008	CSTF2	100	98.732	ENSANAG00000022342	CSTF2	100	98.732	Aotus_nancymaae
ENSMMUG00000013008	CSTF2	99	60.963	ENSACLG00000000779	cstf2	93	62.186	Astatotilapia_calliptera
ENSMMUG00000013008	CSTF2	72	98.413	ENSAMXG00000021477	cstf2	96	98.413	Astyanax_mexicanus
ENSMMUG00000013008	CSTF2	100	95.777	ENSBTAG00000003547	CSTF2	100	95.777	Bos_taurus
ENSMMUG00000013008	CSTF2	100	98.649	ENSCJAG00000004422	CSTF2	100	99.422	Callithrix_jacchus
ENSMMUG00000013008	CSTF2	99	95.730	ENSCAFG00000017551	CSTF2	97	95.730	Canis_familiaris
ENSMMUG00000013008	CSTF2	100	95.645	ENSCAFG00020007619	CSTF2	100	95.645	Canis_lupus_dingo
ENSMMUG00000013008	CSTF2	100	96.115	ENSCHIG00000016994	CSTF2	100	96.115	Capra_hircus
ENSMMUG00000013008	CSTF2	100	98.311	ENSTSYG00000006529	CSTF2	100	98.311	Carlito_syrichta
ENSMMUG00000013008	CSTF2	100	95.310	ENSCPOG00000015255	CSTF2	100	95.310	Cavia_porcellus
ENSMMUG00000013008	CSTF2	100	99.094	ENSCCAG00000032975	CSTF2	100	99.094	Cebus_capucinus
ENSMMUG00000013008	CSTF2	100	99.819	ENSCATG00000022835	CSTF2	100	99.819	Cercocebus_atys
ENSMMUG00000013008	CSTF2	100	95.142	ENSCLAG00000001904	CSTF2	100	95.142	Chinchilla_lanigera
ENSMMUG00000013008	CSTF2	100	99.162	ENSCSAG00000010360	CSTF2	100	99.162	Chlorocebus_sabaeus
ENSMMUG00000013008	CSTF2	70	100.000	ENSCHOG00000012803	CSTF2	75	100.000	Choloepus_hoffmanni
ENSMMUG00000013008	CSTF2	100	75.739	ENSCPBG00000014293	CSTF2	100	75.655	Chrysemys_picta_bellii
ENSMMUG00000013008	CSTF2	100	100.000	ENSCANG00000030612	CSTF2	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000013008	CSTF2	99	91.327	ENSCGRG00001023023	Cstf2	100	89.119	Cricetulus_griseus_chok1gshd
ENSMMUG00000013008	CSTF2	99	89.027	ENSCGRG00000003897	Cstf2	100	87.304	Cricetulus_griseus_crigri
ENSMMUG00000013008	CSTF2	86	81.034	ENSCVAG00000005731	cstf2	97	61.905	Cyprinodon_variegatus
ENSMMUG00000013008	CSTF2	72	98.182	ENSDARG00000090788	cstf2	93	92.188	Danio_rerio
ENSMMUG00000013008	CSTF2	99	92.199	ENSDORG00000007195	Cstf2	100	90.435	Dipodomys_ordii
ENSMMUG00000013008	CSTF2	74	93.243	ENSETEG00000004931	CSTF2	68	93.243	Echinops_telfairi
ENSMMUG00000013008	CSTF2	100	95.812	ENSEASG00005001216	CSTF2	100	95.812	Equus_asinus_asinus
ENSMMUG00000013008	CSTF2	100	95.812	ENSECAG00000009325	CSTF2	100	95.812	Equus_caballus
ENSMMUG00000013008	CSTF2	100	96.147	ENSFCAG00000007000	CSTF2	100	96.147	Felis_catus
ENSMMUG00000013008	CSTF2	92	77.345	ENSFALG00000003859	CSTF2	100	77.522	Ficedula_albicollis
ENSMMUG00000013008	CSTF2	99	95.730	ENSFDAG00000002416	CSTF2	97	95.730	Fukomys_damarensis
ENSMMUG00000013008	CSTF2	86	79.149	ENSFHEG00000017065	cstf2	93	62.679	Fundulus_heteroclitus
ENSMMUG00000013008	CSTF2	99	54.839	ENSGMOG00000005145	cstf2	99	59.002	Gadus_morhua
ENSMMUG00000013008	CSTF2	99	77.933	ENSGALG00000006760	CSTF2	100	76.744	Gallus_gallus
ENSMMUG00000013008	CSTF2	99	59.928	ENSGAFG00000020027	cstf2	96	61.456	Gambusia_affinis
ENSMMUG00000013008	CSTF2	99	55.119	ENSGACG00000017326	cstf2	94	81.633	Gasterosteus_aculeatus
ENSMMUG00000013008	CSTF2	100	77.671	ENSGAGG00000006037	CSTF2	100	78.628	Gopherus_agassizii
ENSMMUG00000013008	CSTF2	100	99.638	ENSGGOG00000022267	CSTF2	100	99.638	Gorilla_gorilla
ENSMMUG00000013008	CSTF2	99	60.893	ENSHBUG00000016183	cstf2	93	62.118	Haplochromis_burtoni
ENSMMUG00000013008	CSTF2	99	96.085	ENSHGLG00000000659	-	97	96.085	Heterocephalus_glaber_female
ENSMMUG00000013008	CSTF2	98	81.900	ENSHGLG00000013455	-	100	79.764	Heterocephalus_glaber_female
ENSMMUG00000013008	CSTF2	98	82.079	ENSHGLG00100015391	-	100	79.933	Heterocephalus_glaber_male
ENSMMUG00000013008	CSTF2	99	96.085	ENSHGLG00100001130	-	97	96.085	Heterocephalus_glaber_male
ENSMMUG00000013008	CSTF2	99	62.433	ENSHCOG00000005157	cstf2	98	62.589	Hippocampus_comes
ENSMMUG00000013008	CSTF2	100	60.531	ENSIPUG00000017839	cstf2	99	61.551	Ictalurus_punctatus
ENSMMUG00000013008	CSTF2	99	95.552	ENSSTOG00000023445	CSTF2	97	95.552	Ictidomys_tridecemlineatus
ENSMMUG00000013008	CSTF2	99	93.950	ENSJJAG00000020507	Cstf2	97	93.950	Jaculus_jaculus
ENSMMUG00000013008	CSTF2	99	59.347	ENSKMAG00000001068	cstf2	96	62.138	Kryptolebias_marmoratus
ENSMMUG00000013008	CSTF2	56	94.915	ENSLBEG00000028720	cstf2	87	89.062	Labrus_bergylta
ENSMMUG00000013008	CSTF2	99	69.028	ENSLACG00000015927	CSTF2	99	67.974	Latimeria_chalumnae
ENSMMUG00000013008	CSTF2	98	77.778	ENSLOCG00000015300	cstf2	93	64.049	Lepisosteus_oculatus
ENSMMUG00000013008	CSTF2	100	92.630	ENSLAFG00000000474	CSTF2	100	92.630	Loxodonta_africana
ENSMMUG00000013008	CSTF2	100	100.000	ENSMFAG00000043888	CSTF2	100	100.000	Macaca_fascicularis
ENSMMUG00000013008	CSTF2	100	100.000	ENSMNEG00000041824	CSTF2	100	100.000	Macaca_nemestrina
ENSMMUG00000013008	CSTF2	100	100.000	ENSMLEG00000036870	CSTF2	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000013008	CSTF2	82	79.399	ENSMAMG00000020364	cstf2	96	59.963	Mastacembelus_armatus
ENSMMUG00000013008	CSTF2	99	60.963	ENSMZEG00005007200	cstf2	96	62.186	Maylandia_zebra
ENSMMUG00000013008	CSTF2	94	69.218	ENSMGAG00000004139	CSTF2	99	69.218	Meleagris_gallopavo
ENSMMUG00000013008	CSTF2	99	91.681	ENSMAUG00000000965	Cstf2	99	91.115	Mesocricetus_auratus
ENSMMUG00000013008	CSTF2	100	96.965	ENSMICG00000014121	CSTF2	100	96.965	Microcebus_murinus
ENSMMUG00000013008	CSTF2	99	90.973	ENSMOCG00000008081	Cstf2	100	89.076	Microtus_ochrogaster
ENSMMUG00000013008	CSTF2	84	92.308	ENSMMOG00000000538	cstf2	97	55.417	Mola_mola
ENSMMUG00000013008	CSTF2	100	81.260	ENSMODG00000011785	CSTF2	100	82.724	Monodelphis_domestica
ENSMMUG00000013008	CSTF2	99	92.389	MGP_CAROLIEiJ_G0033383	Cstf2	100	90.161	Mus_caroli
ENSMMUG00000013008	CSTF2	99	92.389	ENSMUSG00000031256	Cstf2	100	90.161	Mus_musculus
ENSMMUG00000013008	CSTF2	99	92.376	MGP_PahariEiJ_G0031923	Cstf2	100	90.323	Mus_pahari
ENSMMUG00000013008	CSTF2	99	92.389	MGP_SPRETEiJ_G0034548	Cstf2	100	90.161	Mus_spretus
ENSMMUG00000013008	CSTF2	100	90.476	ENSMPUG00000002339	CSTF2	100	90.476	Mustela_putorius_furo
ENSMMUG00000013008	CSTF2	100	88.871	ENSMLUG00000004598	CSTF2	98	88.871	Myotis_lucifugus
ENSMMUG00000013008	CSTF2	99	94.326	ENSNGAG00000021985	Cstf2	97	94.504	Nannospalax_galili
ENSMMUG00000013008	CSTF2	93	63.054	ENSNBRG00000021694	cstf2	100	58.101	Neolamprologus_brichardi
ENSMMUG00000013008	CSTF2	100	99.638	ENSNLEG00000007510	CSTF2	100	99.638	Nomascus_leucogenys
ENSMMUG00000013008	CSTF2	92	79.848	ENSMEUG00000014025	-	100	81.369	Notamacropus_eugenii
ENSMMUG00000013008	CSTF2	99	76.868	ENSMEUG00000007875	-	100	77.027	Notamacropus_eugenii
ENSMMUG00000013008	CSTF2	99	81.317	ENSMEUG00000011186	-	100	81.850	Notamacropus_eugenii
ENSMMUG00000013008	CSTF2	80	96.571	ENSOPRG00000003106	CSTF2	79	96.571	Ochotona_princeps
ENSMMUG00000013008	CSTF2	99	94.840	ENSODEG00000002059	CSTF2	97	94.840	Octodon_degus
ENSMMUG00000013008	CSTF2	93	79.600	ENSONIG00000002631	cstf2	87	75.812	Oreochromis_niloticus
ENSMMUG00000013008	CSTF2	88	98.214	ENSOANG00000004208	CSTF2	87	90.000	Ornithorhynchus_anatinus
ENSMMUG00000013008	CSTF2	99	94.306	ENSOCUG00000010468	CSTF2	97	94.306	Oryctolagus_cuniculus
ENSMMUG00000013008	CSTF2	86	78.879	ENSORLG00000001380	cstf2	97	59.051	Oryzias_latipes
ENSMMUG00000013008	CSTF2	86	79.310	ENSORLG00020021917	cstf2	97	59.402	Oryzias_latipes_hni
ENSMMUG00000013008	CSTF2	86	78.879	ENSORLG00015011996	cstf2	97	59.051	Oryzias_latipes_hsok
ENSMMUG00000013008	CSTF2	99	59.609	ENSOMEG00000015507	cstf2	97	60.498	Oryzias_melastigma
ENSMMUG00000013008	CSTF2	100	90.620	ENSOGAG00000011192	CSTF2	100	90.461	Otolemur_garnettii
ENSMMUG00000013008	CSTF2	100	95.791	ENSOARG00000001022	CSTF2	100	95.791	Ovis_aries
ENSMMUG00000013008	CSTF2	100	99.638	ENSPPAG00000031804	CSTF2	100	99.638	Pan_paniscus
ENSMMUG00000013008	CSTF2	100	96.147	ENSPPRG00000022492	CSTF2	100	96.147	Panthera_pardus
ENSMMUG00000013008	CSTF2	100	95.812	ENSPTIG00000009922	CSTF2	100	95.812	Panthera_tigris_altaica
ENSMMUG00000013008	CSTF2	100	99.638	ENSPTRG00000022090	CSTF2	100	99.638	Pan_troglodytes
ENSMMUG00000013008	CSTF2	100	100.000	ENSPANG00000002303	CSTF2	100	100.000	Papio_anubis
ENSMMUG00000013008	CSTF2	99	63.300	ENSPKIG00000005033	cstf2	93	64.657	Paramormyrops_kingsleyae
ENSMMUG00000013008	CSTF2	99	58.392	ENSPMGG00000006534	cstf2	97	59.441	Periophthalmus_magnuspinnatus
ENSMMUG00000013008	CSTF2	99	91.327	ENSPEMG00000019415	Cstf2	100	88.448	Peromyscus_maniculatus_bairdii
ENSMMUG00000013008	CSTF2	100	82.645	ENSPCIG00000002989	CSTF2	100	83.140	Phascolarctos_cinereus
ENSMMUG00000013008	CSTF2	99	57.168	ENSPLAG00000011176	cstf2	96	59.722	Poecilia_latipinna
ENSMMUG00000013008	CSTF2	99	57.168	ENSPMEG00000017743	cstf2	96	59.375	Poecilia_mexicana
ENSMMUG00000013008	CSTF2	60	67.606	ENSPREG00000011481	cstf2	97	61.336	Poecilia_reticulata
ENSMMUG00000013008	CSTF2	100	98.995	ENSPPYG00000020541	CSTF2	100	98.995	Pongo_abelii
ENSMMUG00000013008	CSTF2	100	98.007	ENSPCOG00000027744	CSTF2	100	98.007	Propithecus_coquereli
ENSMMUG00000013008	CSTF2	98	81.149	ENSPVAG00000008342	CSTF2	100	81.149	Pteropus_vampyrus
ENSMMUG00000013008	CSTF2	59	91.781	ENSPNYG00000010852	cstf2	94	91.781	Pundamilia_nyererei
ENSMMUG00000013008	CSTF2	99	61.706	ENSPNAG00000018887	cstf2	97	62.144	Pygocentrus_nattereri
ENSMMUG00000013008	CSTF2	99	91.858	ENSRNOG00000048025	Cstf2	99	92.500	Rattus_norvegicus
ENSMMUG00000013008	CSTF2	100	98.188	ENSRBIG00000030745	CSTF2	100	98.188	Rhinopithecus_bieti
ENSMMUG00000013008	CSTF2	100	100.000	ENSRROG00000045042	CSTF2	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000013008	CSTF2	100	98.913	ENSSBOG00000021649	CSTF2	100	98.913	Saimiri_boliviensis_boliviensis
ENSMMUG00000013008	CSTF2	98	100.000	ENSSHAG00000003681	CSTF2	92	84.055	Sarcophilus_harrisii
ENSMMUG00000013008	CSTF2	99	63.894	ENSSFOG00015006348	cstf2	98	64.000	Scleropages_formosus
ENSMMUG00000013008	CSTF2	99	58.633	ENSSMAG00000013463	cstf2	97	59.612	Scophthalmus_maximus
ENSMMUG00000013008	CSTF2	100	61.922	ENSSPUG00000005288	-	97	80.132	Sphenodon_punctatus
ENSMMUG00000013008	CSTF2	100	96.121	ENSSSCG00000012486	CSTF2	100	96.970	Sus_scrofa
ENSMMUG00000013008	CSTF2	99	78.185	ENSTGUG00000002253	CSTF2	100	76.645	Taeniopygia_guttata
ENSMMUG00000013008	CSTF2	99	59.304	ENSTNIG00000016860	cstf2	99	59.511	Tetraodon_nigroviridis
ENSMMUG00000013008	CSTF2	55	100.000	ENSTBEG00000010029	-	69	100.000	Tupaia_belangeri
ENSMMUG00000013008	CSTF2	99	96.263	ENSTTRG00000013556	CSTF2	97	96.263	Tursiops_truncatus
ENSMMUG00000013008	CSTF2	100	95.515	ENSUAMG00000026605	CSTF2	100	95.515	Ursus_americanus
ENSMMUG00000013008	CSTF2	100	90.219	ENSUMAG00000012417	CSTF2	100	98.270	Ursus_maritimus
ENSMMUG00000013008	CSTF2	72	94.277	ENSVPAG00000006466	CSTF2	70	94.277	Vicugna_pacos
ENSMMUG00000013008	CSTF2	99	95.907	ENSVVUG00000004717	CSTF2	97	95.907	Vulpes_vulpes
ENSMMUG00000013008	CSTF2	82	92.188	ENSXETG00000009642	cstf2	100	65.625	Xenopus_tropicalis
ENSMMUG00000013008	CSTF2	99	57.597	ENSXCOG00000016436	cstf2	84	96.970	Xiphophorus_couchianus
ENSMMUG00000013008	CSTF2	58	70.497	ENSXMAG00000013524	cstf2	97	57.426	Xiphophorus_maculatus