EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000013520 (Gene tree)
Gene ID: 704848
Gene Symbol: PUM1
Alias: KIAA0099|PUMH1
Full Name: pumilio RNA binding family member 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 138925 bases
Position: chr1:29990739-30129663
Accession: 704848
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	1	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	2	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	3	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	4	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	5	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	6	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	7	8
ENSMMUP00000040466	PUF	PF00806.19	3.6e-71	8	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	1	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	2	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	3	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	4	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	5	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	6	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	7	8
ENSMMUP00000040465	PUF	PF00806.19	1.5e-70	8	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	1	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	2	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	3	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	4	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	5	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	6	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	7	8
ENSMMUP00000054698	PUF	PF00806.19	3.1e-70	8	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	1	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	2	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	3	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	4	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	5	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	6	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	7	8
ENSMMUP00000017782	PUF	PF00806.19	6.9e-70	8	8

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000047431	PUM1-203	3327	XM_015133670	ENSMMUP00000040465	1108 (aa)	XP_014989156	F7GNR6
ENSMMUT00000018986	PUM1-201	5472	XM_001096958	ENSMMUP00000017782	1193 (aa)	XP_001096958	F6Z785
ENSMMUT00000054156	PUM1-202	5169	XM_015133676	ENSMMUP00000054698	1092 (aa)	XP_014989162	A0A1D5R313
ENSMMUT00000047432	PUM1-204	2835	-	ENSMMUP00000040466	944 (aa)	-	F7GNR4

Gene Model

Click here to download ENSMMUG00000013520's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000013520's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000013520	PUM1	86	87.354	ENSMMUG00000023181	PUM2	100	88.889

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000013520	PUM1	100	100.000	ENSG00000134644	PUM1	100	100.000	Homo_sapiens
ENSMMUG00000013520	PUM1	90	91.566	ENSAPOG00000021632	pum1	100	91.084	Acanthochromis_polyacanthus
ENSMMUG00000013520	PUM1	100	100.000	ENSAMEG00000017656	PUM1	97	99.079	Ailuropoda_melanoleuca
ENSMMUG00000013520	PUM1	100	81.312	ENSACIG00000021013	pum1	93	90.602	Amphilophus_citrinellus
ENSMMUG00000013520	PUM1	90	91.566	ENSAOCG00000003944	pum1	100	91.084	Amphiprion_ocellaris
ENSMMUG00000013520	PUM1	90	91.566	ENSAPEG00000014550	pum1	100	91.084	Amphiprion_percula
ENSMMUG00000013520	PUM1	100	91.566	ENSATEG00000016004	pum1	100	91.084	Anabas_testudineus
ENSMMUG00000013520	PUM1	100	98.309	ENSAPLG00000009351	PUM1	100	97.402	Anas_platyrhynchos
ENSMMUG00000013520	PUM1	100	98.309	ENSACAG00000000682	PUM1	98	95.390	Anolis_carolinensis
ENSMMUG00000013520	PUM1	100	100.000	ENSANAG00000027865	PUM1	100	100.000	Aotus_nancymaae
ENSMMUG00000013520	PUM1	90	76.384	ENSACLG00000019354	pum1	100	78.637	Astatotilapia_calliptera
ENSMMUG00000013520	PUM1	100	92.754	ENSAMXG00000020607	pum1	92	92.754	Astyanax_mexicanus
ENSMMUG00000013520	PUM1	100	100.000	ENSBTAG00000018979	PUM1	100	100.000	Bos_taurus
ENSMMUG00000013520	PUM1	100	100.000	ENSCJAG00000006035	PUM1	100	100.000	Callithrix_jacchus
ENSMMUG00000013520	PUM1	100	100.000	ENSCAFG00000011205	PUM1	100	96.899	Canis_familiaris
ENSMMUG00000013520	PUM1	92	97.634	ENSCAFG00020024616	PUM1	99	99.051	Canis_lupus_dingo
ENSMMUG00000013520	PUM1	100	100.000	ENSCHIG00000012952	PUM1	100	99.458	Capra_hircus
ENSMMUG00000013520	PUM1	100	99.682	ENSTSYG00000008868	PUM1	100	99.682	Carlito_syrichta
ENSMMUG00000013520	PUM1	100	99.306	ENSCPOG00000031613	PUM1	100	99.306	Cavia_porcellus
ENSMMUG00000013520	PUM1	100	100.000	ENSCATG00000017991	PUM1	100	100.000	Cercocebus_atys
ENSMMUG00000013520	PUM1	100	99.458	ENSCLAG00000007662	PUM1	100	99.458	Chinchilla_lanigera
ENSMMUG00000013520	PUM1	100	100.000	ENSCSAG00000001028	PUM1	100	98.754	Chlorocebus_sabaeus
ENSMMUG00000013520	PUM1	99	96.408	ENSCHOG00000010245	PUM1	93	96.408	Choloepus_hoffmanni
ENSMMUG00000013520	PUM1	100	98.068	ENSCPBG00000009288	PUM1	100	98.068	Chrysemys_picta_bellii
ENSMMUG00000013520	PUM1	100	100.000	ENSCANG00000042606	PUM1	100	100.000	Colobus_angolensis_palliatus
ENSMMUG00000013520	PUM1	100	99.306	ENSCGRG00001024949	Pum1	100	99.306	Cricetulus_griseus_chok1gshd
ENSMMUG00000013520	PUM1	100	99.306	ENSCGRG00000014197	Pum1	100	99.306	Cricetulus_griseus_crigri
ENSMMUG00000013520	PUM1	85	81.041	ENSCSEG00000015981	pum1	100	77.512	Cynoglossus_semilaevis
ENSMMUG00000013520	PUM1	100	80.817	ENSCVAG00000007043	pum1	100	75.473	Cyprinodon_variegatus
ENSMMUG00000013520	PUM1	100	92.995	ENSDARG00000099256	pum1	95	93.750	Danio_rerio
ENSMMUG00000013520	PUM1	100	100.000	ENSDNOG00000010939	PUM1	100	98.910	Dasypus_novemcinctus
ENSMMUG00000013520	PUM1	89	98.583	ENSDORG00000001875	Pum1	100	99.034	Dipodomys_ordii
ENSMMUG00000013520	PUM1	85	100.000	ENSETEG00000004355	PUM1	87	93.489	Echinops_telfairi
ENSMMUG00000013520	PUM1	100	100.000	ENSEASG00005010813	PUM1	100	98.826	Equus_asinus_asinus
ENSMMUG00000013520	PUM1	100	99.306	ENSECAG00000021369	PUM1	100	98.826	Equus_caballus
ENSMMUG00000013520	PUM1	80	100.000	ENSEEUG00000003871	PUM1	74	100.000	Erinaceus_europaeus
ENSMMUG00000013520	PUM1	100	83.354	ENSELUG00000002409	pum1	95	93.237	Esox_lucius
ENSMMUG00000013520	PUM1	100	100.000	ENSFCAG00000010374	PUM1	100	100.000	Felis_catus
ENSMMUG00000013520	PUM1	100	98.309	ENSFALG00000001214	PUM1	97	94.825	Ficedula_albicollis
ENSMMUG00000013520	PUM1	100	99.306	ENSFDAG00000011319	PUM1	100	99.306	Fukomys_damarensis
ENSMMUG00000013520	PUM1	91	91.084	ENSGMOG00000010491	pum1	94	90.602	Gadus_morhua
ENSMMUG00000013520	PUM1	100	98.309	ENSGALG00000042598	PUM1	100	97.896	Gallus_gallus
ENSMMUG00000013520	PUM1	100	80.941	ENSGAFG00000015617	pum1	100	90.361	Gambusia_affinis
ENSMMUG00000013520	PUM1	100	81.034	ENSGACG00000005717	pum1	94	90.843	Gasterosteus_aculeatus
ENSMMUG00000013520	PUM1	100	98.068	ENSGAGG00000001290	PUM1	99	98.583	Gopherus_agassizii
ENSMMUG00000013520	PUM1	100	100.000	ENSGGOG00000011983	PUM1	100	100.000	Gorilla_gorilla
ENSMMUG00000013520	PUM1	100	81.064	ENSHBUG00000018718	pum1	100	76.049	Haplochromis_burtoni
ENSMMUG00000013520	PUM1	100	99.084	ENSHGLG00000013819	Pum1	100	99.084	Heterocephalus_glaber_female
ENSMMUG00000013520	PUM1	100	99.084	ENSHGLG00100008621	Pum1	100	99.084	Heterocephalus_glaber_male
ENSMMUG00000013520	PUM1	100	92.029	ENSIPUG00000020421	pum1	93	92.029	Ictalurus_punctatus
ENSMMUG00000013520	PUM1	100	100.000	ENSSTOG00000010757	PUM1	100	100.000	Ictidomys_tridecemlineatus
ENSMMUG00000013520	PUM1	100	100.000	ENSJJAG00000000530	Pum1	100	100.000	Jaculus_jaculus
ENSMMUG00000013520	PUM1	100	90.843	ENSKMAG00000003481	pum1	94	90.361	Kryptolebias_marmoratus
ENSMMUG00000013520	PUM1	100	91.566	ENSLBEG00000002527	pum1	94	91.084	Labrus_bergylta
ENSMMUG00000013520	PUM1	100	88.724	ENSLACG00000017188	PUM1	99	86.473	Latimeria_chalumnae
ENSMMUG00000013520	PUM1	100	96.377	ENSLOCG00000005210	pum1	95	96.377	Lepisosteus_oculatus
ENSMMUG00000013520	PUM1	100	98.659	ENSLAFG00000003178	PUM1	100	98.659	Loxodonta_africana
ENSMMUG00000013520	PUM1	100	100.000	ENSMFAG00000010291	PUM1	100	100.000	Macaca_fascicularis
ENSMMUG00000013520	PUM1	100	100.000	ENSMNEG00000034639	PUM1	100	100.000	Macaca_nemestrina
ENSMMUG00000013520	PUM1	100	100.000	ENSMLEG00000038743	PUM1	100	100.000	Mandrillus_leucophaeus
ENSMMUG00000013520	PUM1	100	91.325	ENSMAMG00000011606	pum1	94	90.843	Mastacembelus_armatus
ENSMMUG00000013520	PUM1	100	81.064	ENSMZEG00005005834	pum1	100	76.049	Maylandia_zebra
ENSMMUG00000013520	PUM1	100	98.309	ENSMGAG00000000724	PUM1	100	97.621	Meleagris_gallopavo
ENSMMUG00000013520	PUM1	100	99.306	ENSMAUG00000022090	Pum1	100	99.306	Mesocricetus_auratus
ENSMMUG00000013520	PUM1	100	99.665	ENSMICG00000007713	-	100	99.665	Microcebus_murinus
ENSMMUG00000013520	PUM1	100	97.022	ENSMICG00000012213	-	100	97.022	Microcebus_murinus
ENSMMUG00000013520	PUM1	100	98.901	ENSMOCG00000015463	Pum1	100	98.901	Microtus_ochrogaster
ENSMMUG00000013520	PUM1	90	88.276	ENSMMOG00000019817	pum1	100	90.843	Mola_mola
ENSMMUG00000013520	PUM1	100	97.799	ENSMODG00000017067	PUM1	100	97.490	Monodelphis_domestica
ENSMMUG00000013520	PUM1	90	88.506	ENSMALG00000016399	pum1	100	91.084	Monopterus_albus
ENSMMUG00000013520	PUM1	100	99.272	MGP_CAROLIEiJ_G0026549	Pum1	100	98.626	Mus_caroli
ENSMMUG00000013520	PUM1	100	99.515	ENSMUSG00000028580	Pum1	100	99.306	Mus_musculus
ENSMMUG00000013520	PUM1	100	99.515	MGP_PahariEiJ_G0028881	Pum1	100	99.306	Mus_pahari
ENSMMUG00000013520	PUM1	100	99.515	MGP_SPRETEiJ_G0027529	Pum1	100	99.306	Mus_spretus
ENSMMUG00000013520	PUM1	100	100.000	ENSMPUG00000015454	PUM1	100	98.910	Mustela_putorius_furo
ENSMMUG00000013520	PUM1	100	100.000	ENSMLUG00000006490	PUM1	100	98.910	Myotis_lucifugus
ENSMMUG00000013520	PUM1	100	99.364	ENSNGAG00000002378	Pum1	100	99.364	Nannospalax_galili
ENSMMUG00000013520	PUM1	100	78.452	ENSNBRG00000010689	pum1	100	83.457	Neolamprologus_brichardi
ENSMMUG00000013520	PUM1	100	99.306	ENSNLEG00000001151	PUM1	100	99.306	Nomascus_leucogenys
ENSMMUG00000013520	PUM1	84	96.959	ENSMEUG00000000976	-	82	96.959	Notamacropus_eugenii
ENSMMUG00000013520	PUM1	84	100.000	ENSOPRG00000001776	PUM1	73	100.000	Ochotona_princeps
ENSMMUG00000013520	PUM1	100	99.176	ENSODEG00000003465	PUM1	100	99.176	Octodon_degus
ENSMMUG00000013520	PUM1	100	91.325	ENSONIG00000002290	pum1	94	90.843	Oreochromis_niloticus
ENSMMUG00000013520	PUM1	80	83.269	ENSOANG00000004902	-	100	77.835	Ornithorhynchus_anatinus
ENSMMUG00000013520	PUM1	100	100.000	ENSOCUG00000008641	PUM1	99	98.575	Oryctolagus_cuniculus
ENSMMUG00000013520	PUM1	100	81.931	ENSORLG00000011482	pum1	94	90.602	Oryzias_latipes
ENSMMUG00000013520	PUM1	100	93.012	ENSORLG00020019461	pum1	94	90.602	Oryzias_latipes_hni
ENSMMUG00000013520	PUM1	100	82.054	ENSORLG00015011375	pum1	94	90.602	Oryzias_latipes_hsok
ENSMMUG00000013520	PUM1	90	92.771	ENSOMEG00000009312	pum1	100	76.846	Oryzias_melastigma
ENSMMUG00000013520	PUM1	100	99.306	ENSOGAG00000011063	PUM1	100	96.653	Otolemur_garnettii
ENSMMUG00000013520	PUM1	100	100.000	ENSOARG00000001899	PUM1	100	99.549	Ovis_aries
ENSMMUG00000013520	PUM1	100	100.000	ENSPPAG00000044003	PUM1	100	100.000	Pan_paniscus
ENSMMUG00000013520	PUM1	100	100.000	ENSPPRG00000001370	PUM1	100	100.000	Panthera_pardus
ENSMMUG00000013520	PUM1	100	100.000	ENSPTIG00000010798	PUM1	100	100.000	Panthera_tigris_altaica
ENSMMUG00000013520	PUM1	100	100.000	ENSPTRG00000000453	PUM1	100	100.000	Pan_troglodytes
ENSMMUG00000013520	PUM1	100	100.000	ENSPANG00000016338	PUM1	100	100.000	Papio_anubis
ENSMMUG00000013520	PUM1	94	93.932	ENSPKIG00000010578	pum1	100	78.092	Paramormyrops_kingsleyae
ENSMMUG00000013520	PUM1	100	98.130	ENSPSIG00000014118	PUM1	100	97.569	Pelodiscus_sinensis
ENSMMUG00000013520	PUM1	100	76.819	ENSPMGG00000005836	pum1	100	81.907	Periophthalmus_magnuspinnatus
ENSMMUG00000013520	PUM1	100	99.306	ENSPEMG00000010009	Pum1	100	99.306	Peromyscus_maniculatus_bairdii
ENSMMUG00000013520	PUM1	100	98.008	ENSPCIG00000014151	PUM1	100	98.134	Phascolarctos_cinereus
ENSMMUG00000013520	PUM1	94	90.843	ENSPFOG00000007289	pum1	93	90.361	Poecilia_formosa
ENSMMUG00000013520	PUM1	100	90.843	ENSPLAG00000007256	pum1	94	90.361	Poecilia_latipinna
ENSMMUG00000013520	PUM1	89	90.843	ENSPMEG00000019543	pum1	92	90.361	Poecilia_mexicana
ENSMMUG00000013520	PUM1	100	80.941	ENSPREG00000005195	pum1	100	80.727	Poecilia_reticulata
ENSMMUG00000013520	PUM1	100	100.000	ENSPPYG00000001621	PUM1	100	97.617	Pongo_abelii
ENSMMUG00000013520	PUM1	84	99.383	ENSPCAG00000001979	PUM1	74	99.383	Procavia_capensis
ENSMMUG00000013520	PUM1	100	99.639	ENSPCOG00000004398	PUM1	100	99.639	Propithecus_coquereli
ENSMMUG00000013520	PUM1	100	100.000	ENSPVAG00000005207	PUM1	97	97.066	Pteropus_vampyrus
ENSMMUG00000013520	PUM1	100	81.064	ENSPNYG00000009518	pum1	100	81.446	Pundamilia_nyererei
ENSMMUG00000013520	PUM1	100	92.995	ENSPNAG00000026728	pum1	95	92.995	Pygocentrus_nattereri
ENSMMUG00000013520	PUM1	100	99.515	ENSRNOG00000011709	Pum1	100	98.407	Rattus_norvegicus
ENSMMUG00000013520	PUM1	100	100.000	ENSRBIG00000042521	PUM1	100	100.000	Rhinopithecus_bieti
ENSMMUG00000013520	PUM1	100	100.000	ENSRROG00000020156	PUM1	100	100.000	Rhinopithecus_roxellana
ENSMMUG00000013520	PUM1	100	100.000	ENSSBOG00000032037	PUM1	100	100.000	Saimiri_boliviensis_boliviensis
ENSMMUG00000013520	PUM1	100	97.799	ENSSHAG00000010918	PUM1	100	97.406	Sarcophilus_harrisii
ENSMMUG00000013520	PUM1	100	91.566	ENSSMAG00000010918	pum1	100	91.084	Scophthalmus_maximus
ENSMMUG00000013520	PUM1	100	91.566	ENSSDUG00000009021	pum1	94	91.084	Seriola_dumerili
ENSMMUG00000013520	PUM1	95	91.566	ENSSLDG00000009667	pum1	93	91.084	Seriola_lalandi_dorsalis
ENSMMUG00000013520	PUM1	99	100.000	ENSSARG00000003055	PUM1	91	100.000	Sorex_araneus
ENSMMUG00000013520	PUM1	100	98.309	ENSSPUG00000006267	PUM1	100	96.899	Sphenodon_punctatus
ENSMMUG00000013520	PUM1	90	91.566	ENSSPAG00000016636	pum1	94	91.084	Stegastes_partitus
ENSMMUG00000013520	PUM1	100	100.000	ENSSSCG00000003591	PUM1	100	100.000	Sus_scrofa
ENSMMUG00000013520	PUM1	100	91.566	ENSTRUG00000013121	pum1	94	91.084	Takifugu_rubripes
ENSMMUG00000013520	PUM1	100	91.346	ENSTNIG00000016983	pum1	93	90.865	Tetraodon_nigroviridis
ENSMMUG00000013520	PUM1	93	96.341	ENSTBEG00000013810	PUM1	89	96.341	Tupaia_belangeri
ENSMMUG00000013520	PUM1	92	99.001	ENSTTRG00000007436	PUM1	90	99.001	Tursiops_truncatus
ENSMMUG00000013520	PUM1	99	99.026	ENSUAMG00000018262	-	100	98.623	Ursus_americanus
ENSMMUG00000013520	PUM1	100	99.189	ENSUMAG00000009211	PUM1	100	99.758	Ursus_maritimus
ENSMMUG00000013520	PUM1	100	99.306	ENSVPAG00000005902	PUM1	92	99.661	Vicugna_pacos
ENSMMUG00000013520	PUM1	100	100.000	ENSVVUG00000014631	PUM1	100	99.758	Vulpes_vulpes
ENSMMUG00000013520	PUM1	100	88.944	ENSXETG00000012904	pum1	99	87.448	Xenopus_tropicalis
ENSMMUG00000013520	PUM1	100	90.843	ENSXMAG00000002945	pum1	94	90.361	Xiphophorus_maculatus