EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • Pathways
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSMMUG00000013558 (Gene tree)
Gene ID
699008
Gene Symbol
PUF60
Alias
FIR|RoBPI|SIAHBP1
Full Name
poly(U) binding splicing factor 60
Gene Type
protein_coding
Species
Macaca_mulatta
Status
putative
Strand
Minus strand
Length
13693 bases
Position
chr8:143081688-143095380
Accession
699008
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSMMUP00000017834RRM_1PF00076.223e-4312
ENSMMUP00000017834RRM_1PF00076.223e-4322
ENSMMUP00000031872RRM_1PF00076.223.2e-4312
ENSMMUP00000031872RRM_1PF00076.223.2e-4322
ENSMMUP00000017833RRM_1PF00076.223.2e-4312
ENSMMUP00000017833RRM_1PF00076.223.2e-4322
ENSMMUP00000051903RRM_1PF00076.223.4e-4312
ENSMMUP00000051903RRM_1PF00076.223.4e-4322
ENSMMUP00000046818RRM_1PF00076.224.2e-4312
ENSMMUP00000046818RRM_1PF00076.224.2e-4322
ENSMMUP00000043503RRM_1PF00076.221e-1911
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSMMUT00000056142PUF60-2041668-ENSMMUP00000046818555 (aa)-A0A1D5QFJ8
ENSMMUT00000038793PUF60-2051593-ENSMMUP00000031872530 (aa)-F7AB04
ENSMMUT00000019039PUF60-2031812XM_015146159ENSMMUP00000017833530 (aa)XP_015001645F7FN25
ENSMMUT00000073703PUF60-206735-ENSMMUP00000043503245 (aa)-A0A1D5Q637
ENSMMUT00000077082PUF60-2012770XM_001087975ENSMMUP00000051903560 (aa)XP_001087975A0A1D5QV23
ENSMMUT00000019040PUF60-2021853XM_001087851ENSMMUP00000017834543 (aa)XP_001087851F7FN20
Gene Model
Click here to download ENSMMUG00000013558's gene model file
Pathways
Pathway IDPathway NameSource
mcc03040SpliceosomeKEGG
Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000013558's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSMMUG00000013558PUF605135.294ENSMMUG00000004810U2AF26037.255
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSMMUG00000013558PUF60100100.000ENSG00000179950PUF60100100.000Homo_sapiens
ENSMMUG00000013558PUF609885.389ENSAPOG00000001713puf60b9985.417Acanthochromis_polyacanthus
ENSMMUG00000013558PUF609996.780ENSAMEG00000006406PUF609996.780Ailuropoda_melanoleuca
ENSMMUG00000013558PUF609777.159ENSACIG00000003263-9977.586Amphilophus_citrinellus
ENSMMUG00000013558PUF609785.413ENSACIG00000021705puf60b10085.413Amphilophus_citrinellus
ENSMMUG00000013558PUF609885.389ENSAOCG00000005395puf60b10086.180Amphiprion_ocellaris
ENSMMUG00000013558PUF6010080.712ENSAOCG00000015558-10081.273Amphiprion_ocellaris
ENSMMUG00000013558PUF609772.553ENSAPEG00000001836-9976.471Amphiprion_percula
ENSMMUG00000013558PUF609879.886ENSAPEG00000011923puf60b9982.583Amphiprion_percula
ENSMMUG00000013558PUF609885.199ENSATEG00000001730puf60b9985.227Anabas_testudineus
ENSMMUG00000013558PUF609980.566ENSATEG00000006303-9981.333Anabas_testudineus
ENSMMUG00000013558PUF609898.084ENSAPLG00000010150PUF6010098.084Anas_platyrhynchos
ENSMMUG00000013558PUF609996.198ENSACAG00000001645PUF609896.023Anolis_carolinensis
ENSMMUG00000013558PUF6010099.623ENSANAG00000018626PUF6010099.623Aotus_nancymaae
ENSMMUG00000013558PUF609785.413ENSACLG00000004462puf60b10085.413Astatotilapia_calliptera
ENSMMUG00000013558PUF609884.299ENSAMXG00000036570puf60a9784.932Astyanax_mexicanus
ENSMMUG00000013558PUF609776.449ENSAMXG00000041030puf60b10076.735Astyanax_mexicanus
ENSMMUG00000013558PUF6010099.245ENSBTAG00000037493PUF6010099.245Bos_taurus
ENSMMUG00000013558PUF608050.162WBGene00004389rnp-68353.497Caenorhabditis_elegans
ENSMMUG00000013558PUF6010099.811ENSCJAG00000021485PUF6010099.811Callithrix_jacchus
ENSMMUG00000013558PUF6010099.632ENSCAFG00000001400PUF6010099.632Canis_familiaris
ENSMMUG00000013558PUF6010099.643ENSCAFG00020018754PUF6010099.643Canis_lupus_dingo
ENSMMUG00000013558PUF609998.913ENSCHIG00000001618PUF609298.913Capra_hircus
ENSMMUG00000013558PUF6010099.434ENSTSYG00000011912PUF6010099.612Carlito_syrichta
ENSMMUG00000013558PUF609993.381ENSCPOG00000014613PUF609993.381Cavia_porcellus
ENSMMUG00000013558PUF6010099.623ENSCCAG00000007744PUF6010099.623Cebus_capucinus
ENSMMUG00000013558PUF60100100.000ENSCATG00000035405PUF60100100.000Cercocebus_atys
ENSMMUG00000013558PUF6010098.759ENSCLAG00000009154PUF6010098.759Chinchilla_lanigera
ENSMMUG00000013558PUF6097100.000ENSCSAG00000008878PUF60100100.000Chlorocebus_sabaeus
ENSMMUG00000013558PUF609997.727ENSCPBG00000005595PUF609997.727Chrysemys_picta_bellii
ENSMMUG00000013558PUF6010048.175ENSCING00000008436-9948.603Ciona_intestinalis
ENSMMUG00000013558PUF607068.421ENSCING00000002156-8763.043Ciona_intestinalis
ENSMMUG00000013558PUF609555.364ENSCSAVG00000001385-9955.000Ciona_savignyi
ENSMMUG00000013558PUF609549.109ENSCSAVG00000004765-9750.412Ciona_savignyi
ENSMMUG00000013558PUF608999.543ENSCANG00000041843PUF60100100.000Colobus_angolensis_palliatus
ENSMMUG00000013558PUF6010098.050ENSCGRG00001017442Puf6010098.050Cricetulus_griseus_chok1gshd
ENSMMUG00000013558PUF609898.659ENSCGRG00000003717Puf609997.302Cricetulus_griseus_crigri
ENSMMUG00000013558PUF609884.630ENSCSEG00000019887puf60b9384.440Cynoglossus_semilaevis
ENSMMUG00000013558PUF609971.751ENSCSEG00000014845-8977.273Cynoglossus_semilaevis
ENSMMUG00000013558PUF609784.645ENSCVAG00000009386puf60b10085.797Cyprinodon_variegatus
ENSMMUG00000013558PUF608979.789ENSCVAG00000001560-9879.536Cyprinodon_variegatus
ENSMMUG00000013558PUF609778.759ENSDARG00000001241puf60b9996.032Danio_rerio
ENSMMUG00000013558PUF609787.146ENSDARG00000032175puf60a9994.043Danio_rerio
ENSMMUG00000013558PUF6010080.995ENSDNOG00000043278PUF609881.475Dasypus_novemcinctus
ENSMMUG00000013558PUF609999.094ENSDORG00000004585Puf6010099.094Dipodomys_ordii
ENSMMUG00000013558PUF609548.797FBgn0028577hfp9949.644Drosophila_melanogaster
ENSMMUG00000013558PUF609860.672ENSEBUG00000014291puf60b8565.739Eptatretus_burgeri
ENSMMUG00000013558PUF609569.841ENSEBUG00000005470-8872.016Eptatretus_burgeri
ENSMMUG00000013558PUF6010099.643ENSEASG00005009695PUF6010099.643Equus_asinus_asinus
ENSMMUG00000013558PUF6010098.679ENSECAG00000024681PUF609999.458Equus_caballus
ENSMMUG00000013558PUF6010084.387ENSELUG00000018443-9985.602Esox_lucius
ENSMMUG00000013558PUF609982.830ENSELUG00000006507puf60b10079.286Esox_lucius
ENSMMUG00000013558PUF6010099.245ENSFCAG00000001045PUF6010099.245Felis_catus
ENSMMUG00000013558PUF609985.496ENSFALG00000001136PUF609986.667Ficedula_albicollis
ENSMMUG00000013558PUF6010098.404ENSFDAG00000017177PUF6010098.404Fukomys_damarensis
ENSMMUG00000013558PUF609379.116ENSFHEG00000021687PUF6010079.959Fundulus_heteroclitus
ENSMMUG00000013558PUF6010083.364ENSFHEG00000020046puf60b10085.988Fundulus_heteroclitus
ENSMMUG00000013558PUF609871.429ENSGMOG00000006392puf60b10070.677Gadus_morhua
ENSMMUG00000013558PUF607591.500ENSGALG00000039901PUF609497.965Gallus_gallus
ENSMMUG00000013558PUF6010082.617ENSGAFG00000021040puf60b10085.413Gambusia_affinis
ENSMMUG00000013558PUF609779.344ENSGAFG00000004334-9978.842Gambusia_affinis
ENSMMUG00000013558PUF6010073.184ENSGACG00000004717puf60b10072.523Gasterosteus_aculeatus
ENSMMUG00000013558PUF609969.639ENSGACG00000001484-10069.231Gasterosteus_aculeatus
ENSMMUG00000013558PUF609997.727ENSGAGG00000013289PUF609397.727Gopherus_agassizii
ENSMMUG00000013558PUF60100100.000ENSGGOG00000004646PUF60100100.000Gorilla_gorilla
ENSMMUG00000013558PUF609884.630ENSHBUG00000015118puf60b10085.413Haplochromis_burtoni
ENSMMUG00000013558PUF609981.203ENSHBUG00000009634-10082.540Haplochromis_burtoni
ENSMMUG00000013558PUF6010098.404ENSHGLG00000006111PUF6010098.404Heterocephalus_glaber_female
ENSMMUG00000013558PUF6010098.404ENSHGLG00100012362PUF6010098.404Heterocephalus_glaber_male
ENSMMUG00000013558PUF609881.952ENSHCOG00000015541puf60b10081.550Hippocampus_comes
ENSMMUG00000013558PUF609666.601ENSHCOG00000000378-9964.850Hippocampus_comes
ENSMMUG00000013558PUF609782.420ENSIPUG00000002453puf60a9982.798Ictalurus_punctatus
ENSMMUG00000013558PUF609778.571ENSIPUG00000004660puf60b9978.343Ictalurus_punctatus
ENSMMUG00000013558PUF6010099.107ENSSTOG00000025037PUF6010099.107Ictidomys_tridecemlineatus
ENSMMUG00000013558PUF6010098.754ENSJJAG00000001076Puf6010098.754Jaculus_jaculus
ENSMMUG00000013558PUF609778.261ENSKMAG00000010106-10075.746Kryptolebias_marmoratus
ENSMMUG00000013558PUF609784.837ENSKMAG00000016745puf60b10085.988Kryptolebias_marmoratus
ENSMMUG00000013558PUF609983.117ENSLBEG00000012505puf60b10083.117Labrus_bergylta
ENSMMUG00000013558PUF606891.185ENSLACG00000005456PUF6010090.710Latimeria_chalumnae
ENSMMUG00000013558PUF6010089.681ENSLOCG00000010106puf60b10088.555Lepisosteus_oculatus
ENSMMUG00000013558PUF609897.893ENSLAFG00000022929PUF6010095.886Loxodonta_africana
ENSMMUG00000013558PUF60100100.000ENSMFAG00000043373PUF60100100.000Macaca_fascicularis
ENSMMUG00000013558PUF60100100.000ENSMNEG00000031099PUF60100100.000Macaca_nemestrina
ENSMMUG00000013558PUF6097100.000ENSMLEG00000040009PUF60100100.000Mandrillus_leucophaeus
ENSMMUG00000013558PUF609981.955ENSMAMG00000019476-9981.973Mastacembelus_armatus
ENSMMUG00000013558PUF609885.009ENSMAMG00000010394puf60b10083.551Mastacembelus_armatus
ENSMMUG00000013558PUF609785.413ENSMZEG00005018515puf60b10085.413Maylandia_zebra
ENSMMUG00000013558PUF609981.391ENSMZEG00005019425-9981.784Maylandia_zebra
ENSMMUG00000013558PUF609997.905ENSMGAG00000013070PUF609997.905Meleagris_gallopavo
ENSMMUG00000013558PUF6010076.822ENSMAUG00000018549-10076.822Mesocricetus_auratus
ENSMMUG00000013558PUF609096.444ENSMAUG00000014267-10097.794Mesocricetus_auratus
ENSMMUG00000013558PUF6010099.623ENSMICG00000012226PUF6010099.623Microcebus_murinus
ENSMMUG00000013558PUF6010098.227ENSMOCG00000018780Puf6010098.227Microtus_ochrogaster
ENSMMUG00000013558PUF609785.605ENSMMOG00000004217puf60b10085.605Mola_mola
ENSMMUG00000013558PUF609872.658ENSMMOG00000018059-9976.484Mola_mola
ENSMMUG00000013558PUF6010097.422ENSMODG00000009161PUF6010097.422Monodelphis_domestica
ENSMMUG00000013558PUF609877.609ENSMALG00000006797puf60b9977.652Monopterus_albus
ENSMMUG00000013558PUF609979.887ENSMALG00000000200-9979.057Monopterus_albus
ENSMMUG00000013558PUF6010098.050MGP_CAROLIEiJ_G0019910Puf6010098.050Mus_caroli
ENSMMUG00000013558PUF6010098.050ENSMUSG00000002524Puf6010098.050Mus_musculus
ENSMMUG00000013558PUF6010098.050MGP_PahariEiJ_G0019920Puf6010098.050Mus_pahari
ENSMMUG00000013558PUF6010098.050MGP_SPRETEiJ_G0020812Puf6010098.050Mus_spretus
ENSMMUG00000013558PUF609998.732ENSMPUG00000008137PUF609798.732Mustela_putorius_furo
ENSMMUG00000013558PUF609998.188ENSMLUG00000000238-9898.188Myotis_lucifugus
ENSMMUG00000013558PUF6010091.509ENSMLUG00000013032-9895.050Myotis_lucifugus
ENSMMUG00000013558PUF6010098.404ENSNGAG00000000712Puf6010099.031Nannospalax_galili
ENSMMUG00000013558PUF608281.457ENSNBRG00000013047puf60b9784.235Neolamprologus_brichardi
ENSMMUG00000013558PUF609981.579ENSNBRG00000017223-9981.939Neolamprologus_brichardi
ENSMMUG00000013558PUF60100100.000ENSNLEG00000002156PUF60100100.000Nomascus_leucogenys
ENSMMUG00000013558PUF607399.659ENSOPRG00000002147PUF607599.659Ochotona_princeps
ENSMMUG00000013558PUF609573.964ENSODEG00000015513-9971.186Octodon_degus
ENSMMUG00000013558PUF609097.778ENSODEG00000014024-100100.000Octodon_degus
ENSMMUG00000013558PUF609884.630ENSONIG00000006247puf60b9984.659Oreochromis_niloticus
ENSMMUG00000013558PUF609981.579ENSONIG00000014030-9982.008Oreochromis_niloticus
ENSMMUG00000013558PUF609678.210ENSOANG00000006962PUF609978.405Ornithorhynchus_anatinus
ENSMMUG00000013558PUF609884.630ENSORLG00000012279puf60b10084.837Oryzias_latipes
ENSMMUG00000013558PUF609778.598ENSORLG00000028655-9978.707Oryzias_latipes
ENSMMUG00000013558PUF609884.630ENSORLG00020007333puf6010084.837Oryzias_latipes_hni
ENSMMUG00000013558PUF609978.131ENSORLG00020018144-9978.236Oryzias_latipes_hni
ENSMMUG00000013558PUF609978.067ENSORLG00015016833-9978.172Oryzias_latipes_hsok
ENSMMUG00000013558PUF609883.743ENSORLG00015007718puf60b10084.704Oryzias_latipes_hsok
ENSMMUG00000013558PUF609979.135ENSOMEG00000022185-9979.135Oryzias_melastigma
ENSMMUG00000013558PUF609882.342ENSOMEG00000001643puf60b9983.030Oryzias_melastigma
ENSMMUG00000013558PUF609899.425ENSOGAG00000006259PUF609998.211Otolemur_garnettii
ENSMMUG00000013558PUF609896.743ENSOARG00000016235PUF609996.750Ovis_aries
ENSMMUG00000013558PUF60100100.000ENSPPAG00000029933PUF60100100.000Pan_paniscus
ENSMMUG00000013558PUF6010099.245ENSPPRG00000003257PUF6010099.245Panthera_pardus
ENSMMUG00000013558PUF609998.507ENSPTIG00000009795PUF609996.935Panthera_tigris_altaica
ENSMMUG00000013558PUF6010099.811ENSPTRG00000020670PUF6010099.811Pan_troglodytes
ENSMMUG00000013558PUF6010099.811ENSPTRG00000043963-10099.811Pan_troglodytes
ENSMMUG00000013558PUF60100100.000ENSPANG00000021936PUF60100100.000Papio_anubis
ENSMMUG00000013558PUF6010085.102ENSPKIG00000004295puf60a9992.059Paramormyrops_kingsleyae
ENSMMUG00000013558PUF6010086.517ENSPKIG00000012204puf60b10087.885Paramormyrops_kingsleyae
ENSMMUG00000013558PUF609897.893ENSPSIG00000004679PUF609997.897Pelodiscus_sinensis
ENSMMUG00000013558PUF609784.351ENSPMGG00000013444puf60b9984.351Periophthalmus_magnuspinnatus
ENSMMUG00000013558PUF6010098.227ENSPEMG00000008820Puf6010098.227Peromyscus_maniculatus_bairdii
ENSMMUG00000013558PUF605289.844ENSPMAG00000009884puf60b10087.117Petromyzon_marinus
ENSMMUG00000013558PUF609999.044ENSPCIG00000020270PUF609999.232Phascolarctos_cinereus
ENSMMUG00000013558PUF6010083.364ENSPFOG00000019217puf60b10084.630Poecilia_formosa
ENSMMUG00000013558PUF609979.623ENSPFOG00000011118-9979.962Poecilia_formosa
ENSMMUG00000013558PUF609784.837ENSPLAG00000010754puf60b10085.988Poecilia_latipinna
ENSMMUG00000013558PUF6010079.143ENSPLAG00000017025-9379.104Poecilia_latipinna
ENSMMUG00000013558PUF6010083.364ENSPMEG00000000838puf60b10085.988Poecilia_mexicana
ENSMMUG00000013558PUF6010079.143ENSPMEG00000009767-9379.478Poecilia_mexicana
ENSMMUG00000013558PUF6010080.692ENSPREG00000005440puf60b10083.730Poecilia_reticulata
ENSMMUG00000013558PUF607998.321ENSPPYG00000018951-9598.321Pongo_abelii
ENSMMUG00000013558PUF607999.281ENSPCAG00000014837PUF6010099.281Procavia_capensis
ENSMMUG00000013558PUF6010099.434ENSPCOG00000027981PUF6010099.434Propithecus_coquereli
ENSMMUG00000013558PUF6097100.000ENSPVAG00000016167PUF6081100.000Pteropus_vampyrus
ENSMMUG00000013558PUF609981.391ENSPNYG00000004273-9981.784Pundamilia_nyererei
ENSMMUG00000013558PUF609785.413ENSPNYG00000002556puf60b10085.413Pundamilia_nyererei
ENSMMUG00000013558PUF609982.075ENSPNAG00000019909puf60a9984.766Pygocentrus_nattereri
ENSMMUG00000013558PUF609877.481ENSPNAG00000019415puf60b9178.794Pygocentrus_nattereri
ENSMMUG00000013558PUF6010097.989ENSRNOG00000009960Puf6010097.989Rattus_norvegicus
ENSMMUG00000013558PUF60100100.000ENSRBIG00000035274PUF60100100.000Rhinopithecus_bieti
ENSMMUG00000013558PUF60100100.000ENSRROG00000029360PUF60100100.000Rhinopithecus_roxellana
ENSMMUG00000013558PUF6010097.547ENSSBOG00000027089PUF609997.921Saimiri_boliviensis_boliviensis
ENSMMUG00000013558PUF608998.723ENSSHAG00000006668PUF609696.654Sarcophilus_harrisii
ENSMMUG00000013558PUF6010080.536ENSSFOG00015019371puf60a9887.123Scleropages_formosus
ENSMMUG00000013558PUF609386.235ENSSFOG00015019619puf60b9986.235Scleropages_formosus
ENSMMUG00000013558PUF607391.638ENSSMAG00000016381puf60b7491.638Scophthalmus_maximus
ENSMMUG00000013558PUF609979.584ENSSDUG00000007048-9979.962Seriola_dumerili
ENSMMUG00000013558PUF609983.302ENSSDUG00000009935puf60b10083.302Seriola_dumerili
ENSMMUG00000013558PUF609985.038ENSSLDG00000024011puf60b10083.738Seriola_lalandi_dorsalis
ENSMMUG00000013558PUF609780.228ENSSLDG00000007366-9980.645Seriola_lalandi_dorsalis
ENSMMUG00000013558PUF607581.152ENSSPUG00000013518PUF609485.460Sphenodon_punctatus
ENSMMUG00000013558PUF609781.870ENSSPAG00000020285-10082.443Stegastes_partitus
ENSMMUG00000013558PUF609882.625ENSSPAG00000012144puf60b10083.925Stegastes_partitus
ENSMMUG00000013558PUF609998.029ENSSSCG00000038800PUF609898.812Sus_scrofa
ENSMMUG00000013558PUF6052100.000ENSTGUG00000016423-100100.000Taeniopygia_guttata
ENSMMUG00000013558PUF609894.828ENSTGUG00000012797-10094.828Taeniopygia_guttata
ENSMMUG00000013558PUF609884.061ENSTRUG00000005420puf60b10082.617Takifugu_rubripes
ENSMMUG00000013558PUF609777.519ENSTRUG00000008843-10080.160Takifugu_rubripes
ENSMMUG00000013558PUF609877.778ENSTNIG00000003069-10077.820Tetraodon_nigroviridis
ENSMMUG00000013558PUF609884.061ENSTNIG00000013675puf60b10083.902Tetraodon_nigroviridis
ENSMMUG00000013558PUF607981.214ENSTBEG00000001899-10081.503Tupaia_belangeri
ENSMMUG00000013558PUF606095.608ENSTBEG00000002751-9995.593Tupaia_belangeri
ENSMMUG00000013558PUF609798.643ENSTTRG00000017088PUF6010098.643Tursiops_truncatus
ENSMMUG00000013558PUF6010099.623ENSUAMG00000024917PUF6010099.623Ursus_americanus
ENSMMUG00000013558PUF609894.828ENSUMAG00000000272PUF609994.022Ursus_maritimus
ENSMMUG00000013558PUF609999.277ENSVVUG00000022527PUF6010099.612Vulpes_vulpes
ENSMMUG00000013558PUF609894.242ENSXETG00000012469puf609994.246Xenopus_tropicalis
ENSMMUG00000013558PUF609781.574ENSXCOG00000012355puf60b10085.516Xiphophorus_couchianus
ENSMMUG00000013558PUF6010083.364ENSXMAG00000001862puf60b10085.988Xiphophorus_maculatus
ENSMMUG00000013558PUF609877.672ENSXMAG00000010507-9979.528Xiphophorus_maculatus

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