EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000014090 (Gene tree)
Gene ID: 702070
Gene Symbol: CHD1
Alias: -
Full Name: chromodomain helicase DNA binding protein 1
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 72154 bases
Position: chr6:95797802-95869955
Accession: 702070
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000046174	ResIII	PF04851.15	2.6e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000073038	CHD1-203	1419	-	ENSMMUP00000057308	472 (aa)	-	A0A1D5RAG7
ENSMMUT00000019790	CHD1-201	5567	XM_001097125	ENSMMUP00000018527	1804 (aa)	XP_001097125	F7C8A6
ENSMMUT00000057112	CHD1-202	4281	XM_015140488	ENSMMUP00000046174	1426 (aa)	XP_014995974	A0A1D5QDQ5

Gene Model

Click here to download ENSMMUG00000014090's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000014090's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000014090	CHD1	94	61.750	ENSMMUG00000011782	-	72	65.578
ENSMMUG00000014090	CHD1	59	36.742	ENSMMUG00000020458	CHD6	85	40.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000014090	CHD1	99	99.085	ENSG00000153922	CHD1	83	99.085	Homo_sapiens
ENSMMUG00000014090	CHD1	80	82.714	ENSAPOG00000005764	chd1	97	82.986	Acanthochromis_polyacanthus
ENSMMUG00000014090	CHD1	85	80.801	ENSAOCG00000023105	chd1	77	80.801	Amphiprion_ocellaris
ENSMMUG00000014090	CHD1	85	82.286	ENSAPEG00000013544	chd1	77	82.286	Amphiprion_percula
ENSMMUG00000014090	CHD1	85	82.339	ENSAMXG00000010843	chd1	91	83.347	Astyanax_mexicanus
ENSMMUG00000014090	CHD1	99	99.648	ENSCATG00000032035	CHD1	83	99.648	Cercocebus_atys
ENSMMUG00000014090	CHD1	99	99.648	ENSCSAG00000015339	CHD1	83	99.648	Chlorocebus_sabaeus
ENSMMUG00000014090	CHD1	99	97.183	ENSCANG00000036916	CHD1	83	97.183	Colobus_angolensis_palliatus
ENSMMUG00000014090	CHD1	99	96.062	ENSCGRG00001023943	Chd1	83	96.062	Cricetulus_griseus_chok1gshd
ENSMMUG00000014090	CHD1	99	96.062	ENSCGRG00000008652	Chd1	83	96.062	Cricetulus_griseus_crigri
ENSMMUG00000014090	CHD1	85	80.344	ENSCSEG00000009553	chd1	77	80.344	Cynoglossus_semilaevis
ENSMMUG00000014090	CHD1	98	97.856	ENSEASG00005016110	CHD1	99	97.856	Equus_asinus_asinus
ENSMMUG00000014090	CHD1	86	81.442	ENSELUG00000017677	chd1	75	81.722	Esox_lucius
ENSMMUG00000014090	CHD1	86	81.337	ENSFHEG00000021164	chd1	87	82.843	Fundulus_heteroclitus
ENSMMUG00000014090	CHD1	95	77.018	ENSGMOG00000001537	chd1	77	77.130	Gadus_morhua
ENSMMUG00000014090	CHD1	89	89.717	ENSGALG00000031327	-	78	89.796	Gallus_gallus
ENSMMUG00000014090	CHD1	90	81.694	ENSGAFG00000019880	chd1	81	81.694	Gambusia_affinis
ENSMMUG00000014090	CHD1	98	94.737	ENSGGOG00000011463	CHD1	82	94.737	Gorilla_gorilla
ENSMMUG00000014090	CHD1	84	82.836	ENSHCOG00000014222	chd1	74	83.586	Hippocampus_comes
ENSMMUG00000014090	CHD1	83	84.945	ENSIPUG00000001369	chd1	77	82.686	Ictalurus_punctatus
ENSMMUG00000014090	CHD1	75	94.884	ENSLAFG00000023183	CHD1	99	94.884	Loxodonta_africana
ENSMMUG00000014090	CHD1	99	99.648	ENSMFAG00000031226	CHD1	83	99.648	Macaca_fascicularis
ENSMMUG00000014090	CHD1	99	99.578	ENSMNEG00000045073	CHD1	83	99.578	Macaca_nemestrina
ENSMMUG00000014090	CHD1	98	94.512	ENSMLEG00000041096	CHD1	82	94.512	Mandrillus_leucophaeus
ENSMMUG00000014090	CHD1	87	79.745	ENSMZEG00005010957	chd1	95	79.637	Maylandia_zebra
ENSMMUG00000014090	CHD1	55	68.414	ENSMGAG00000008369	-	100	67.176	Meleagris_gallopavo
ENSMMUG00000014090	CHD1	96	96.507	ENSMOCG00000019121	Chd1	82	96.507	Microtus_ochrogaster
ENSMMUG00000014090	CHD1	53	95.532	ENSMODG00000019266	-	100	95.532	Monodelphis_domestica
ENSMMUG00000014090	CHD1	95	78.462	ENSMALG00000013317	chd1	95	77.990	Monopterus_albus
ENSMMUG00000014090	CHD1	99	94.444	MGP_CAROLIEiJ_G0021099	Chd1	99	96.858	Mus_caroli
ENSMMUG00000014090	CHD1	99	96.132	ENSMUSG00000023852	Chd1	99	97.043	Mus_musculus
ENSMMUG00000014090	CHD1	99	95.921	MGP_PahariEiJ_G0023414	Chd1	99	97.045	Mus_pahari
ENSMMUG00000014090	CHD1	82	81.679	ENSNBRG00000006860	chd1	72	84.224	Neolamprologus_brichardi
ENSMMUG00000014090	CHD1	98	99.073	ENSNLEG00000014493	CHD1	82	99.073	Nomascus_leucogenys
ENSMMUG00000014090	CHD1	99	92.907	ENSOANG00000004891	CHD1	83	92.907	Ornithorhynchus_anatinus
ENSMMUG00000014090	CHD1	71	76.447	ENSORLG00015016725	chd1	93	77.069	Oryzias_latipes_hsok
ENSMMUG00000014090	CHD1	98	97.376	ENSPPAG00000043367	CHD1	82	97.376	Pan_paniscus
ENSMMUG00000014090	CHD1	99	99.085	ENSPTRG00000017103	CHD1	83	99.085	Pan_troglodytes
ENSMMUG00000014090	CHD1	99	99.648	ENSPANG00000006387	CHD1	83	99.648	Papio_anubis
ENSMMUG00000014090	CHD1	88	77.859	ENSPKIG00000024719	chd1	75	79.381	Paramormyrops_kingsleyae
ENSMMUG00000014090	CHD1	87	81.395	ENSPMGG00000005785	chd1	93	81.476	Periophthalmus_magnuspinnatus
ENSMMUG00000014090	CHD1	99	96.343	ENSPEMG00000015939	Chd1	83	96.343	Peromyscus_maniculatus_bairdii
ENSMMUG00000014090	CHD1	60	76.588	ENSPLAG00000006473	-	85	77.568	Poecilia_latipinna
ENSMMUG00000014090	CHD1	95	76.742	ENSPREG00000004209	chd1	81	77.360	Poecilia_reticulata
ENSMMUG00000014090	CHD1	99	95.728	ENSRNOG00000014434	Chd1	100	95.728	Rattus_norvegicus
ENSMMUG00000014090	CHD1	96	99.491	ENSRBIG00000044325	CHD1	82	99.491	Rhinopithecus_bieti
ENSMMUG00000014090	CHD1	99	99.296	ENSRROG00000001726	CHD1	83	99.296	Rhinopithecus_roxellana
ENSMMUG00000014090	CHD1	86	81.463	ENSSFOG00015007161	chd1	91	82.296	Scleropages_formosus
ENSMMUG00000014090	CHD1	95	78.388	ENSSDUG00000018314	chd1	95	78.242	Seriola_dumerili
ENSMMUG00000014090	CHD1	61	83.713	ENSSLDG00000017244	chd1	88	83.713	Seriola_lalandi_dorsalis
ENSMMUG00000014090	CHD1	95	79.412	ENSSPAG00000007024	chd1	95	78.661	Stegastes_partitus
ENSMMUG00000014090	CHD1	99	97.609	ENSSSCG00000014177	CHD1	96	97.609	Sus_scrofa
ENSMMUG00000014090	CHD1	87	78.892	ENSTRUG00000010282	chd1	79	75.867	Takifugu_rubripes
ENSMMUG00000014090	CHD1	86	76.341	ENSTNIG00000007101	chd1	95	78.240	Tetraodon_nigroviridis
ENSMMUG00000014090	CHD1	95	74.393	ENSXCOG00000017184	chd1	81	73.525	Xiphophorus_couchianus
ENSMMUG00000014090	CHD1	92	77.727	ENSXMAG00000014538	chd1	95	78.284	Xiphophorus_maculatus