EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSMMUG00000015279 (Gene tree)
Gene ID: 696973
Gene Symbol: SMARCA2
Alias: BAF190|BRM|SNF2|SNF2L2|SNF2LA|SWI2|Sth1p|hBRM|hSNF2a
Full Name: SWI/SNF related%2C matrix associated%2C actin dependent regulator of chromatin%2C subfamily a%2C member 2
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 223500 bases
Position: chr15:82339129-82562628
Accession: 696973
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000059161	ResIII	PF04851.15	1.2e-08	1	1
ENSMMUP00000039161	ResIII	PF04851.15	2.4e-08	1	1
ENSMMUP00000057032	ResIII	PF04851.15	2.6e-08	1	1
ENSMMUP00000042350	ResIII	PF04851.15	3.3e-08	1	1
ENSMMUP00000020038	ResIII	PF04851.15	3.4e-08	1	1
ENSMMUP00000020039	ResIII	PF04851.15	3.4e-08	1	1
ENSMMUP00000059161	BRK	PF07533.16	3.1e-17	1	1
ENSMMUP00000042350	BRK	PF07533.16	3.1e-17	1	1
ENSMMUP00000057032	BRK	PF07533.16	3.7e-17	1	1
ENSMMUP00000039161	BRK	PF07533.16	3.7e-17	1	1
ENSMMUP00000020039	BRK	PF07533.16	3.9e-17	1	1
ENSMMUP00000020038	BRK	PF07533.16	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000058559	SMARCA2-208	4614	-	ENSMMUP00000059161	1537 (aa)	-	A0A1D5RFR7
ENSMMUT00000071563	SMARCA2-207	4677	-	ENSMMUP00000042350	1558 (aa)	-	A0A1D5Q2T8
ENSMMUT00000064020	SMARCA2-209	4518	-	ENSMMUP00000057032	1505 (aa)	-	A0A1D5R9P1
ENSMMUT00000064795	SMARCA2-201	5909	-	ENSMMUP00000059171	193 (aa)	-	A0A1D5RFS7
ENSMMUT00000021426	SMARCA2-206	783	-	ENSMMUP00000020040	260 (aa)	-	F7DU61
ENSMMUT00000021427	SMARCA2-203	1864	XM_015117819	ENSMMUP00000020041	276 (aa)	XP_014973305	F7DU54
ENSMMUT00000021424	SMARCA2-202	5739	XM_015117815	ENSMMUP00000020038	1568 (aa)	XP_014973301	F7DUF5
ENSMMUT00000021425	SMARCA2-204	4761	XM_015117810	ENSMMUP00000020039	1586 (aa)	XP_014973296	F7DUE0
ENSMMUT00000046118	SMARCA2-205	837	-	ENSMMUP00000039162	278 (aa)	-	F7BEV7
ENSMMUT00000046117	SMARCA2-210	4464	-	ENSMMUP00000039161	1487 (aa)	-	F7BEW4

Gene Model

Click here to download ENSMMUG00000015279's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc04714	Thermogenesis	KEGG
mcc05225	Hepatocellular carcinoma	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000015279's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSMMUG00000015279	SMARCA2	96	75.856	ENSMMUG00000012042	SMARCA4	99	84.696

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000015279	SMARCA2	100	99.308	ENSG00000080503	SMARCA2	100	100.000	Homo_sapiens
ENSMMUG00000015279	SMARCA2	100	80.465	ENSAPOG00000002641	SMARCA2	97	80.348	Acanthochromis_polyacanthus
ENSMMUG00000015279	SMARCA2	94	90.000	ENSAMEG00000012325	SMARCA2	100	99.452	Ailuropoda_melanoleuca
ENSMMUG00000015279	SMARCA2	100	80.013	ENSACIG00000015607	SMARCA2	97	80.077	Amphilophus_citrinellus
ENSMMUG00000015279	SMARCA2	100	80.678	ENSAOCG00000009647	-	97	80.309	Amphiprion_ocellaris
ENSMMUG00000015279	SMARCA2	100	80.528	ENSAPEG00000007646	SMARCA2	97	80.348	Amphiprion_percula
ENSMMUG00000015279	SMARCA2	99	81.644	ENSATEG00000006916	SMARCA2	96	80.488	Anabas_testudineus
ENSMMUG00000015279	SMARCA2	99	87.393	ENSAPLG00000013873	SMARCA2	98	88.472	Anas_platyrhynchos
ENSMMUG00000015279	SMARCA2	100	90.758	ENSACAG00000002423	SMARCA2	100	90.121	Anolis_carolinensis
ENSMMUG00000015279	SMARCA2	100	99.118	ENSANAG00000026498	SMARCA2	100	99.118	Aotus_nancymaae
ENSMMUG00000015279	SMARCA2	100	81.127	ENSACLG00000004248	SMARCA2	97	81.287	Astatotilapia_calliptera
ENSMMUG00000015279	SMARCA2	100	81.818	ENSAMXG00000012404	smarca2	97	82.759	Astyanax_mexicanus
ENSMMUG00000015279	SMARCA2	100	97.513	ENSBTAG00000007494	SMARCA2	100	97.513	Bos_taurus
ENSMMUG00000015279	SMARCA2	100	98.534	ENSCJAG00000010710	SMARCA2	99	98.930	Callithrix_jacchus
ENSMMUG00000015279	SMARCA2	100	98.214	ENSCAFG00000002013	SMARCA2	100	98.214	Canis_familiaris
ENSMMUG00000015279	SMARCA2	78	94.823	ENSCAFG00020026802	SMARCA2	98	94.823	Canis_lupus_dingo
ENSMMUG00000015279	SMARCA2	100	97.541	ENSCHIG00000025863	SMARCA2	100	97.541	Capra_hircus
ENSMMUG00000015279	SMARCA2	100	97.803	ENSTSYG00000003858	SMARCA2	100	97.803	Carlito_syrichta
ENSMMUG00000015279	SMARCA2	99	93.211	ENSCAPG00000002890	SMARCA2	99	93.528	Cavia_aperea
ENSMMUG00000015279	SMARCA2	100	97.265	ENSCPOG00000005475	SMARCA2	100	97.265	Cavia_porcellus
ENSMMUG00000015279	SMARCA2	100	99.173	ENSCCAG00000030636	SMARCA2	100	99.173	Cebus_capucinus
ENSMMUG00000015279	SMARCA2	100	99.490	ENSCATG00000031470	SMARCA2	100	99.490	Cercocebus_atys
ENSMMUG00000015279	SMARCA2	100	97.460	ENSCLAG00000014484	SMARCA2	100	97.460	Chinchilla_lanigera
ENSMMUG00000015279	SMARCA2	94	99.356	ENSCSAG00000008650	SMARCA2	99	99.454	Chlorocebus_sabaeus
ENSMMUG00000015279	SMARCA2	87	94.330	ENSCHOG00000004316	SMARCA2	87	94.330	Choloepus_hoffmanni
ENSMMUG00000015279	SMARCA2	100	92.239	ENSCPBG00000025463	SMARCA2	100	92.176	Chrysemys_picta_bellii
ENSMMUG00000015279	SMARCA2	100	99.811	ENSCANG00000039597	SMARCA2	100	99.811	Colobus_angolensis_palliatus
ENSMMUG00000015279	SMARCA2	100	89.434	ENSCGRG00001002323	Smarca2	100	89.404	Cricetulus_griseus_chok1gshd
ENSMMUG00000015279	SMARCA2	99	77.628	ENSCSEG00000019311	SMARCA2	97	77.228	Cynoglossus_semilaevis
ENSMMUG00000015279	SMARCA2	89	80.568	ENSCVAG00000016571	SMARCA2	95	80.431	Cyprinodon_variegatus
ENSMMUG00000015279	SMARCA2	100	82.305	ENSDARG00000008904	smarca2	97	82.242	Danio_rerio
ENSMMUG00000015279	SMARCA2	100	96.658	ENSDNOG00000006402	SMARCA2	100	96.658	Dasypus_novemcinctus
ENSMMUG00000015279	SMARCA2	100	97.736	ENSDORG00000014832	Smarca2	100	97.736	Dipodomys_ordii
ENSMMUG00000015279	SMARCA2	81	60.170	FBgn0000212	brm	90	51.161	Drosophila_melanogaster
ENSMMUG00000015279	SMARCA2	87	62.366	ENSEBUG00000002449	-	95	61.278	Eptatretus_burgeri
ENSMMUG00000015279	SMARCA2	95	70.290	ENSEBUG00000011442	-	96	70.502	Eptatretus_burgeri
ENSMMUG00000015279	SMARCA2	100	97.895	ENSEASG00005010312	SMARCA2	100	97.895	Equus_asinus_asinus
ENSMMUG00000015279	SMARCA2	67	98.611	ENSEEUG00000015540	-	69	98.611	Erinaceus_europaeus
ENSMMUG00000015279	SMARCA2	92	81.373	ENSELUG00000010318	smarca2	96	79.306	Esox_lucius
ENSMMUG00000015279	SMARCA2	100	97.640	ENSFCAG00000001568	SMARCA2	100	97.640	Felis_catus
ENSMMUG00000015279	SMARCA2	100	92.132	ENSFALG00000010416	SMARCA2	100	92.603	Ficedula_albicollis
ENSMMUG00000015279	SMARCA2	99	96.076	ENSFDAG00000010502	SMARCA2	99	95.886	Fukomys_damarensis
ENSMMUG00000015279	SMARCA2	100	80.538	ENSFHEG00000021250	SMARCA2	97	80.000	Fundulus_heteroclitus
ENSMMUG00000015279	SMARCA2	98	78.030	ENSGMOG00000014229	SMARCA2	97	77.857	Gadus_morhua
ENSMMUG00000015279	SMARCA2	100	92.812	ENSGALG00000010164	SMARCA2	100	91.921	Gallus_gallus
ENSMMUG00000015279	SMARCA2	95	77.230	ENSGAFG00000001164	SMARCA2	93	76.683	Gambusia_affinis
ENSMMUG00000015279	SMARCA2	99	79.442	ENSGACG00000014488	SMARCA2	97	78.821	Gasterosteus_aculeatus
ENSMMUG00000015279	SMARCA2	100	92.239	ENSGAGG00000024412	SMARCA2	100	92.176	Gopherus_agassizii
ENSMMUG00000015279	SMARCA2	100	94.451	ENSGGOG00000000513	SMARCA2	100	94.767	Gorilla_gorilla
ENSMMUG00000015279	SMARCA2	100	80.564	ENSHBUG00000006691	SMARCA2	97	80.514	Haplochromis_burtoni
ENSMMUG00000015279	SMARCA2	99	96.512	ENSHGLG00000005215	SMARCA2	99	96.512	Heterocephalus_glaber_female
ENSMMUG00000015279	SMARCA2	100	96.112	ENSHGLG00100010496	SMARCA2	100	96.112	Heterocephalus_glaber_male
ENSMMUG00000015279	SMARCA2	94	75.267	ENSHCOG00000015348	-	88	86.733	Hippocampus_comes
ENSMMUG00000015279	SMARCA2	100	80.997	ENSIPUG00000011060	smarca2	97	80.703	Ictalurus_punctatus
ENSMMUG00000015279	SMARCA2	100	98.053	ENSSTOG00000006812	SMARCA2	100	98.053	Ictidomys_tridecemlineatus
ENSMMUG00000015279	SMARCA2	100	97.522	ENSJJAG00000010867	Smarca2	100	97.522	Jaculus_jaculus
ENSMMUG00000015279	SMARCA2	100	80.112	ENSKMAG00000015844	-	98	79.924	Kryptolebias_marmoratus
ENSMMUG00000015279	SMARCA2	51	72.932	ENSLACG00000000270	SMARCA2	83	82.870	Latimeria_chalumnae
ENSMMUG00000015279	SMARCA2	98	84.261	ENSLOCG00000011499	smarca2	99	83.847	Lepisosteus_oculatus
ENSMMUG00000015279	SMARCA2	100	95.521	ENSLAFG00000014061	SMARCA2	99	84.697	Loxodonta_africana
ENSMMUG00000015279	SMARCA2	100	98.298	ENSMFAG00000003814	SMARCA2	100	98.298	Macaca_fascicularis
ENSMMUG00000015279	SMARCA2	100	99.370	ENSMNEG00000041069	SMARCA2	100	99.370	Macaca_nemestrina
ENSMMUG00000015279	SMARCA2	100	97.037	ENSMLEG00000027418	SMARCA2	100	97.037	Mandrillus_leucophaeus
ENSMMUG00000015279	SMARCA2	100	80.970	ENSMAMG00000003056	SMARCA2	97	82.430	Mastacembelus_armatus
ENSMMUG00000015279	SMARCA2	100	80.779	ENSMZEG00005020709	SMARCA2	97	80.735	Maylandia_zebra
ENSMMUG00000015279	SMARCA2	81	77.955	ENSMGAG00000005160	-	100	76.964	Meleagris_gallopavo
ENSMMUG00000015279	SMARCA2	100	98.613	ENSMICG00000005162	SMARCA2	100	98.613	Microcebus_murinus
ENSMMUG00000015279	SMARCA2	100	97.139	ENSMOCG00000001611	Smarca2	100	97.139	Microtus_ochrogaster
ENSMMUG00000015279	SMARCA2	99	79.421	ENSMMOG00000014196	SMARCA2	97	79.423	Mola_mola
ENSMMUG00000015279	SMARCA2	100	94.466	ENSMODG00000003578	SMARCA2	100	93.459	Monodelphis_domestica
ENSMMUG00000015279	SMARCA2	99	81.467	ENSMALG00000009611	SMARCA2	97	81.180	Monopterus_albus
ENSMMUG00000015279	SMARCA2	100	96.567	MGP_CAROLIEiJ_G0022841	Smarca2	100	96.610	Mus_caroli
ENSMMUG00000015279	SMARCA2	100	96.399	ENSMUSG00000024921	Smarca2	99	99.441	Mus_musculus
ENSMMUG00000015279	SMARCA2	100	96.833	MGP_PahariEiJ_G0014334	Smarca2	100	96.833	Mus_pahari
ENSMMUG00000015279	SMARCA2	100	96.275	MGP_SPRETEiJ_G0023759	Smarca2	99	100.000	Mus_spretus
ENSMMUG00000015279	SMARCA2	81	99.297	ENSMPUG00000005171	SMARCA2	94	99.297	Mustela_putorius_furo
ENSMMUG00000015279	SMARCA2	99	91.239	ENSMLUG00000002342	SMARCA2	99	90.615	Myotis_lucifugus
ENSMMUG00000015279	SMARCA2	99	96.219	ENSNGAG00000000108	Smarca2	99	96.219	Nannospalax_galili
ENSMMUG00000015279	SMARCA2	95	67.895	ENSNBRG00000017998	SMARCA2	94	83.085	Neolamprologus_brichardi
ENSMMUG00000015279	SMARCA2	100	96.110	ENSNLEG00000008575	SMARCA2	100	96.110	Nomascus_leucogenys
ENSMMUG00000015279	SMARCA2	100	86.192	ENSMEUG00000009812	SMARCA2	100	85.876	Notamacropus_eugenii
ENSMMUG00000015279	SMARCA2	100	91.635	ENSOPRG00000013474	SMARCA2	100	91.508	Ochotona_princeps
ENSMMUG00000015279	SMARCA2	99	96.813	ENSODEG00000005452	SMARCA2	99	96.813	Octodon_degus
ENSMMUG00000015279	SMARCA2	99	80.895	ENSONIG00000014163	SMARCA2	97	80.989	Oreochromis_niloticus
ENSMMUG00000015279	SMARCA2	52	94.480	ENSOANG00000008299	-	95	98.248	Ornithorhynchus_anatinus
ENSMMUG00000015279	SMARCA2	100	97.467	ENSOCUG00000006320	SMARCA2	100	97.467	Oryctolagus_cuniculus
ENSMMUG00000015279	SMARCA2	100	79.837	ENSORLG00000020820	SMARCA2	100	78.722	Oryzias_latipes
ENSMMUG00000015279	SMARCA2	100	79.887	ENSORLG00015006289	SMARCA2	98	90.872	Oryzias_latipes_hsok
ENSMMUG00000015279	SMARCA2	99	80.806	ENSOMEG00000009736	-	99	79.670	Oryzias_melastigma
ENSMMUG00000015279	SMARCA2	100	93.746	ENSOGAG00000017053	SMARCA2	99	94.173	Otolemur_garnettii
ENSMMUG00000015279	SMARCA2	100	95.863	ENSOARG00000013265	SMARCA2	100	95.863	Ovis_aries
ENSMMUG00000015279	SMARCA2	100	96.231	ENSPPAG00000038717	SMARCA2	100	96.231	Pan_paniscus
ENSMMUG00000015279	SMARCA2	100	97.704	ENSPPRG00000001879	SMARCA2	100	97.704	Panthera_pardus
ENSMMUG00000015279	SMARCA2	100	97.550	ENSPTRG00000051168	SMARCA2	100	97.550	Pan_troglodytes
ENSMMUG00000015279	SMARCA2	100	92.143	ENSPANG00000025121	SMARCA2	100	92.206	Papio_anubis
ENSMMUG00000015279	SMARCA2	100	83.185	ENSPKIG00000018469	-	100	82.792	Paramormyrops_kingsleyae
ENSMMUG00000015279	SMARCA2	100	91.683	ENSPSIG00000006284	SMARCA2	100	91.429	Pelodiscus_sinensis
ENSMMUG00000015279	SMARCA2	99	74.343	ENSPMGG00000013696	-	97	74.935	Periophthalmus_magnuspinnatus
ENSMMUG00000015279	SMARCA2	100	96.547	ENSPEMG00000019821	Smarca2	100	96.547	Peromyscus_maniculatus_bairdii
ENSMMUG00000015279	SMARCA2	94	73.183	ENSPMAG00000005337	-	94	72.482	Petromyzon_marinus
ENSMMUG00000015279	SMARCA2	100	94.515	ENSPCIG00000015658	SMARCA2	100	94.579	Phascolarctos_cinereus
ENSMMUG00000015279	SMARCA2	100	80.188	ENSPFOG00000001856	SMARCA2	97	79.031	Poecilia_formosa
ENSMMUG00000015279	SMARCA2	99	80.340	ENSPLAG00000017829	SMARCA2	96	77.943	Poecilia_latipinna
ENSMMUG00000015279	SMARCA2	99	80.391	ENSPMEG00000001815	-	97	76.184	Poecilia_mexicana
ENSMMUG00000015279	SMARCA2	100	80.000	ENSPREG00000013800	SMARCA2	96	77.664	Poecilia_reticulata
ENSMMUG00000015279	SMARCA2	100	99.107	ENSPPYG00000019258	SMARCA2	100	99.107	Pongo_abelii
ENSMMUG00000015279	SMARCA2	79	87.548	ENSPCAG00000016969	SMARCA2	78	87.163	Procavia_capensis
ENSMMUG00000015279	SMARCA2	100	96.597	ENSPCOG00000025709	SMARCA2	100	96.597	Propithecus_coquereli
ENSMMUG00000015279	SMARCA2	91	98.421	ENSPVAG00000000901	SMARCA2	95	98.421	Pteropus_vampyrus
ENSMMUG00000015279	SMARCA2	100	77.367	ENSPNYG00000004533	SMARCA2	97	77.182	Pundamilia_nyererei
ENSMMUG00000015279	SMARCA2	99	83.047	ENSPNAG00000014635	smarca2	96	83.084	Pygocentrus_nattereri
ENSMMUG00000015279	SMARCA2	100	96.370	ENSRNOG00000011931	Smarca2	100	96.370	Rattus_norvegicus
ENSMMUG00000015279	SMARCA2	100	97.321	ENSRBIG00000038618	SMARCA2	100	97.321	Rhinopithecus_bieti
ENSMMUG00000015279	SMARCA2	100	98.550	ENSRROG00000019271	SMARCA2	100	98.550	Rhinopithecus_roxellana
ENSMMUG00000015279	SMARCA2	100	95.196	ENSSBOG00000034827	SMARCA2	100	95.196	Saimiri_boliviensis_boliviensis
ENSMMUG00000015279	SMARCA2	100	93.830	ENSSHAG00000007884	SMARCA2	100	93.830	Sarcophilus_harrisii
ENSMMUG00000015279	SMARCA2	96	85.196	ENSSFOG00015014870	SMARCA2	99	85.126	Scleropages_formosus
ENSMMUG00000015279	SMARCA2	100	80.629	ENSSMAG00000013707	SMARCA2	97	80.645	Scophthalmus_maximus
ENSMMUG00000015279	SMARCA2	99	80.831	ENSSDUG00000008852	-	96	80.990	Seriola_dumerili
ENSMMUG00000015279	SMARCA2	99	81.122	ENSSLDG00000025449	SMARCA2	97	80.415	Seriola_lalandi_dorsalis
ENSMMUG00000015279	SMARCA2	95	97.531	ENSSARG00000007888	SMARCA2	95	96.842	Sorex_araneus
ENSMMUG00000015279	SMARCA2	95	87.359	ENSSPUG00000001629	SMARCA2	98	86.322	Sphenodon_punctatus
ENSMMUG00000015279	SMARCA2	100	80.639	ENSSPAG00000020091	-	97	80.206	Stegastes_partitus
ENSMMUG00000015279	SMARCA2	100	97.667	ENSSSCG00000005232	SMARCA2	100	97.667	Sus_scrofa
ENSMMUG00000015279	SMARCA2	100	90.799	ENSTGUG00000005460	SMARCA2	100	90.522	Taeniopygia_guttata
ENSMMUG00000015279	SMARCA2	99	80.559	ENSTRUG00000015619	SMARCA2	97	79.135	Takifugu_rubripes
ENSMMUG00000015279	SMARCA2	68	100.000	ENSTBEG00000008767	SMARCA2	74	100.000	Tupaia_belangeri
ENSMMUG00000015279	SMARCA2	100	94.136	ENSTTRG00000002033	SMARCA2	100	94.136	Tursiops_truncatus
ENSMMUG00000015279	SMARCA2	95	95.103	ENSUAMG00000024701	SMARCA2	99	95.637	Ursus_americanus
ENSMMUG00000015279	SMARCA2	86	95.000	ENSVPAG00000001204	SMARCA2	100	88.361	Vicugna_pacos
ENSMMUG00000015279	SMARCA2	77	95.830	ENSVVUG00000004598	SMARCA2	99	95.830	Vulpes_vulpes
ENSMMUG00000015279	SMARCA2	100	83.478	ENSXETG00000015299	smarca2	82	87.709	Xenopus_tropicalis
ENSMMUG00000015279	SMARCA2	94	80.240	ENSXCOG00000011073	SMARCA2	97	80.014	Xiphophorus_couchianus
ENSMMUG00000015279	SMARCA2	100	79.665	ENSXMAG00000015611	SMARCA2	96	78.516	Xiphophorus_maculatus