EuRBPDB

Description

RBDs

Transcripts

Gene Model

Pathways

PPI

Orthologs

Description

Ensembl ID: ENSMMUG00000015558 (Gene tree)
Gene ID: 719351
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Macaca_mulatta
Status: putative
Strand: Minus strand
Length: 58001 bases
Position: chr10:249253-307253
Accession: 719351
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSMMUP00000020409	PRP1_N	PF06424.12	2.4e-57	1	1
ENSMMUP00000038297	PRP1_N	PF06424.12	2.4e-57	1	1
ENSMMUP00000050082	PRP1_N	PF06424.12	2.6e-57	1	1
ENSMMUP00000046438	PRP1_N	PF06424.12	6.2e-38	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSMMUT00000045275	PRPF6-202	2745	-	ENSMMUP00000038297	914 (aa)	-	F7GUP7
ENSMMUT00000065215	PRPF6-204	1770	-	ENSMMUP00000046438	589 (aa)	-	A0A1D5QEG9
ENSMMUT00000062911	PRPF6-201	6908	XM_015148551	ENSMMUP00000050082	868 (aa)	XP_015004037	A0A1D5QPV5
ENSMMUT00000021821	PRPF6-203	2742	-	ENSMMUP00000020409	913 (aa)	-	F6Q8L4

Gene Model

Click here to download ENSMMUG00000015558's gene model file

Pathways

Pathway ID	Pathway Name	Source
mcc03040	Spliceosome	KEGG

Protein-Protein Interaction (PPI)

Clik here to download ENSMMUG00000015558's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSMMUG00000015558	PRPF6	98	99.653	ENSG00000101161	PRPF6	100	93.206	Homo_sapiens
ENSMMUG00000015558	PRPF6	98	93.761	ENSAPOG00000010395	prpf6	96	86.518	Acanthochromis_polyacanthus
ENSMMUG00000015558	PRPF6	98	99.307	ENSAMEG00000001916	PRPF6	90	99.307	Ailuropoda_melanoleuca
ENSMMUG00000015558	PRPF6	95	94.296	ENSACIG00000019862	prpf6	96	86.093	Amphilophus_citrinellus
ENSMMUG00000015558	PRPF6	98	93.761	ENSAOCG00000012988	prpf6	96	86.412	Amphiprion_ocellaris
ENSMMUG00000015558	PRPF6	98	91.854	ENSAPEG00000008301	prpf6	100	84.691	Amphiprion_percula
ENSMMUG00000015558	PRPF6	95	94.118	ENSATEG00000005581	prpf6	96	85.881	Anabas_testudineus
ENSMMUG00000015558	PRPF6	98	99.133	ENSACAG00000006464	PRPF6	95	90.446	Anolis_carolinensis
ENSMMUG00000015558	PRPF6	98	99.480	ENSANAG00000012661	PRPF6	97	97.957	Aotus_nancymaae
ENSMMUG00000015558	PRPF6	98	93.414	ENSACLG00000025875	prpf6	96	86.093	Astatotilapia_calliptera
ENSMMUG00000015558	PRPF6	98	93.761	ENSAMXG00000001929	prpf6	96	86.610	Astyanax_mexicanus
ENSMMUG00000015558	PRPF6	98	99.307	ENSBTAG00000011656	PRPF6	100	90.764	Bos_taurus
ENSMMUG00000015558	PRPF6	98	99.480	ENSCJAG00000010616	PRPF6	100	92.357	Callithrix_jacchus
ENSMMUG00000015558	PRPF6	98	99.307	ENSCAFG00000013165	PRPF6	100	91.083	Canis_familiaris
ENSMMUG00000015558	PRPF6	98	99.307	ENSCAFG00020002050	PRPF6	100	91.083	Canis_lupus_dingo
ENSMMUG00000015558	PRPF6	98	99.307	ENSCHIG00000018187	PRPF6	100	90.764	Capra_hircus
ENSMMUG00000015558	PRPF6	98	99.653	ENSTSYG00000007814	PRPF6	100	91.507	Carlito_syrichta
ENSMMUG00000015558	PRPF6	98	98.440	ENSCAPG00000015077	PRPF6	94	98.440	Cavia_aperea
ENSMMUG00000015558	PRPF6	98	99.653	ENSCPOG00000007518	PRPF6	100	91.401	Cavia_porcellus
ENSMMUG00000015558	PRPF6	98	99.480	ENSCCAG00000024564	PRPF6	100	93.642	Cebus_capucinus
ENSMMUG00000015558	PRPF6	98	99.653	ENSCATG00000037473	PRPF6	100	93.100	Cercocebus_atys
ENSMMUG00000015558	PRPF6	98	93.068	ENSCLAG00000003854	PRPF6	100	87.367	Chinchilla_lanigera
ENSMMUG00000015558	PRPF6	98	91.252	ENSCSAG00000016742	PRPF6	100	88.080	Chlorocebus_sabaeus
ENSMMUG00000015558	PRPF6	87	78.682	ENSCHOG00000003315	-	98	79.835	Choloepus_hoffmanni
ENSMMUG00000015558	PRPF6	98	99.133	ENSCPBG00000013964	PRPF6	96	90.552	Chrysemys_picta_bellii
ENSMMUG00000015558	PRPF6	98	73.973	ENSCING00000008817	-	99	68.321	Ciona_intestinalis
ENSMMUG00000015558	PRPF6	98	99.653	ENSCANG00000038230	PRPF6	100	93.312	Colobus_angolensis_palliatus
ENSMMUG00000015558	PRPF6	98	99.653	ENSCGRG00001022666	Prpf6	100	91.507	Cricetulus_griseus_chok1gshd
ENSMMUG00000015558	PRPF6	98	85.442	ENSCSEG00000018561	prpf6	100	81.509	Cynoglossus_semilaevis
ENSMMUG00000015558	PRPF6	98	93.588	ENSCVAG00000010550	prpf6	89	94.281	Cyprinodon_variegatus
ENSMMUG00000015558	PRPF6	95	94.474	ENSDARG00000091367	prpf6	99	85.775	Danio_rerio
ENSMMUG00000015558	PRPF6	98	98.960	ENSDNOG00000040544	PRPF6	100	90.446	Dasypus_novemcinctus
ENSMMUG00000015558	PRPF6	93	98.911	ENSDORG00000005406	Prpf6	97	98.911	Dipodomys_ordii
ENSMMUG00000015558	PRPF6	95	74.291	FBgn0036828	CG6841	98	67.417	Drosophila_melanogaster
ENSMMUG00000015558	PRPF6	85	90.756	ENSETEG00000004447	PRPF6	77	100.000	Echinops_telfairi
ENSMMUG00000015558	PRPF6	98	88.448	ENSEBUG00000008835	prpf6	99	80.826	Eptatretus_burgeri
ENSMMUG00000015558	PRPF6	98	99.307	ENSEASG00005023115	PRPF6	100	90.977	Equus_asinus_asinus
ENSMMUG00000015558	PRPF6	98	99.308	ENSECAG00000013983	PRPF6	91	99.308	Equus_caballus
ENSMMUG00000015558	PRPF6	89	100.000	ENSEEUG00000000180	PRPF6	81	100.000	Erinaceus_europaeus
ENSMMUG00000015558	PRPF6	98	92.201	ENSELUG00000001945	prpf6	93	84.713	Esox_lucius
ENSMMUG00000015558	PRPF6	98	99.307	ENSFCAG00000001183	PRPF6	100	90.764	Felis_catus
ENSMMUG00000015558	PRPF6	98	98.960	ENSFALG00000010326	-	97	90.552	Ficedula_albicollis
ENSMMUG00000015558	PRPF6	97	91.638	ENSFALG00000006046	-	97	83.439	Ficedula_albicollis
ENSMMUG00000015558	PRPF6	98	99.653	ENSFDAG00000006451	PRPF6	97	99.653	Fukomys_damarensis
ENSMMUG00000015558	PRPF6	98	94.454	ENSFHEG00000000560	prpf6	96	86.518	Fundulus_heteroclitus
ENSMMUG00000015558	PRPF6	98	89.347	ENSGMOG00000015622	prpf6	99	82.893	Gadus_morhua
ENSMMUG00000015558	PRPF6	98	98.960	ENSGALG00000006001	PRPF6	100	90.764	Gallus_gallus
ENSMMUG00000015558	PRPF6	98	86.135	ENSGAFG00000021109	prpf6	96	81.529	Gambusia_affinis
ENSMMUG00000015558	PRPF6	98	91.681	ENSGACG00000002576	prpf6	99	84.607	Gasterosteus_aculeatus
ENSMMUG00000015558	PRPF6	98	99.133	ENSGAGG00000008653	PRPF6	96	90.446	Gopherus_agassizii
ENSMMUG00000015558	PRPF6	98	99.654	ENSGGOG00000016876	PRPF6	96	99.646	Gorilla_gorilla
ENSMMUG00000015558	PRPF6	98	93.414	ENSHBUG00000004496	prpf6	96	86.093	Haplochromis_burtoni
ENSMMUG00000015558	PRPF6	98	99.653	ENSHGLG00000009222	PRPF6	100	91.401	Heterocephalus_glaber_female
ENSMMUG00000015558	PRPF6	98	99.653	ENSHGLG00100016600	PRPF6	94	99.653	Heterocephalus_glaber_male
ENSMMUG00000015558	PRPF6	98	92.374	ENSHCOG00000011513	prpf6	96	85.032	Hippocampus_comes
ENSMMUG00000015558	PRPF6	95	94.652	ENSIPUG00000004912	prpf6	96	86.412	Ictalurus_punctatus
ENSMMUG00000015558	PRPF6	98	95.156	ENSSTOG00000002922	PRPF6	100	88.653	Ictidomys_tridecemlineatus
ENSMMUG00000015558	PRPF6	98	99.653	ENSJJAG00000000836	Prpf6	100	91.401	Jaculus_jaculus
ENSMMUG00000015558	PRPF6	95	94.652	ENSKMAG00000017800	prpf6	96	86.306	Kryptolebias_marmoratus
ENSMMUG00000015558	PRPF6	98	92.721	ENSLBEG00000012582	prpf6	96	85.350	Labrus_bergylta
ENSMMUG00000015558	PRPF6	98	96.014	ENSLOCG00000004827	prpf6	86	96.707	Lepisosteus_oculatus
ENSMMUG00000015558	PRPF6	98	99.133	ENSLAFG00000005272	PRPF6	100	90.446	Loxodonta_africana
ENSMMUG00000015558	PRPF6	98	99.653	ENSMFAG00000037542	PRPF6	96	99.646	Macaca_fascicularis
ENSMMUG00000015558	PRPF6	100	84.509	ENSMNEG00000045555	PRPF6	100	84.509	Macaca_nemestrina
ENSMMUG00000015558	PRPF6	98	93.761	ENSMAMG00000010718	prpf6	96	86.306	Mastacembelus_armatus
ENSMMUG00000015558	PRPF6	98	93.241	ENSMZEG00005026539	prpf6	97	93.934	Maylandia_zebra
ENSMMUG00000015558	PRPF6	98	93.414	ENSMZEG00005015261	-	99	85.790	Maylandia_zebra
ENSMMUG00000015558	PRPF6	98	98.960	ENSMGAG00000006634	PRPF6	93	98.960	Meleagris_gallopavo
ENSMMUG00000015558	PRPF6	98	99.653	ENSMAUG00000013969	Prpf6	100	91.614	Mesocricetus_auratus
ENSMMUG00000015558	PRPF6	87	99.613	ENSMICG00000017793	PRPF6	96	99.613	Microcebus_murinus
ENSMMUG00000015558	PRPF6	98	99.653	ENSMOCG00000001701	Prpf6	100	91.507	Microtus_ochrogaster
ENSMMUG00000015558	PRPF6	95	94.118	ENSMMOG00000020419	prpf6	100	85.456	Mola_mola
ENSMMUG00000015558	PRPF6	98	99.307	ENSMODG00000017051	PRPF6	99	96.935	Monodelphis_domestica
ENSMMUG00000015558	PRPF6	98	93.934	ENSMALG00000000089	prpf6	92	93.934	Monopterus_albus
ENSMMUG00000015558	PRPF6	98	89.081	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSMMUG00000015558	PRPF6	98	99.653	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSMMUG00000015558	PRPF6	98	99.653	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSMMUG00000015558	PRPF6	98	99.653	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSMMUG00000015558	PRPF6	98	98.787	ENSMPUG00000008673	PRPF6	99	98.787	Mustela_putorius_furo
ENSMMUG00000015558	PRPF6	98	99.653	ENSNGAG00000003365	Prpf6	100	91.507	Nannospalax_galili
ENSMMUG00000015558	PRPF6	98	93.588	ENSNBRG00000015025	prpf6	96	86.200	Neolamprologus_brichardi
ENSMMUG00000015558	PRPF6	98	99.653	ENSNLEG00000010208	PRPF6	96	97.699	Nomascus_leucogenys
ENSMMUG00000015558	PRPF6	100	88.270	ENSMEUG00000009824	-	90	88.270	Notamacropus_eugenii
ENSMMUG00000015558	PRPF6	99	98.142	ENSODEG00000004841	PRPF6	100	85.987	Octodon_degus
ENSMMUG00000015558	PRPF6	98	93.414	ENSONIG00000017406	prpf6	96	86.200	Oreochromis_niloticus
ENSMMUG00000015558	PRPF6	98	99.480	ENSOANG00000004920	PRPF6	100	90.764	Ornithorhynchus_anatinus
ENSMMUG00000015558	PRPF6	98	99.133	ENSOCUG00000014151	PRPF6	92	99.133	Oryctolagus_cuniculus
ENSMMUG00000015558	PRPF6	98	93.588	ENSORLG00000009592	prpf6	96	85.669	Oryzias_latipes
ENSMMUG00000015558	PRPF6	98	93.761	ENSORLG00020001458	prpf6	96	85.775	Oryzias_latipes_hni
ENSMMUG00000015558	PRPF6	98	93.761	ENSORLG00015018762	prpf6	96	85.775	Oryzias_latipes_hsok
ENSMMUG00000015558	PRPF6	98	93.588	ENSOMEG00000012174	prpf6	96	86.200	Oryzias_melastigma
ENSMMUG00000015558	PRPF6	98	87.716	ENSOGAG00000007573	PRPF6	100	83.987	Otolemur_garnettii
ENSMMUG00000015558	PRPF6	98	99.307	ENSOARG00000008776	PRPF6	91	99.307	Ovis_aries
ENSMMUG00000015558	PRPF6	98	99.653	ENSPPAG00000008686	PRPF6	96	99.646	Pan_paniscus
ENSMMUG00000015558	PRPF6	98	99.307	ENSPPRG00000008497	PRPF6	100	90.764	Panthera_pardus
ENSMMUG00000015558	PRPF6	98	99.307	ENSPTIG00000011184	PRPF6	91	99.307	Panthera_tigris_altaica
ENSMMUG00000015558	PRPF6	98	99.653	ENSPTRG00000013765	PRPF6	96	99.646	Pan_troglodytes
ENSMMUG00000015558	PRPF6	98	99.307	ENSPANG00000024135	PRPF6	100	92.781	Papio_anubis
ENSMMUG00000015558	PRPF6	98	94.974	ENSPKIG00000005627	prpf6	99	87.473	Paramormyrops_kingsleyae
ENSMMUG00000015558	PRPF6	98	99.307	ENSPSIG00000007717	PRPF6	97	99.307	Pelodiscus_sinensis
ENSMMUG00000015558	PRPF6	95	91.459	ENSPMGG00000008925	prpf6	96	84.591	Periophthalmus_magnuspinnatus
ENSMMUG00000015558	PRPF6	98	99.480	ENSPEMG00000016036	Prpf6	100	91.507	Peromyscus_maniculatus_bairdii
ENSMMUG00000015558	PRPF6	98	88.083	ENSPMAG00000006144	prpf6	99	81.529	Petromyzon_marinus
ENSMMUG00000015558	PRPF6	98	99.480	ENSPCIG00000017909	PRPF6	100	91.083	Phascolarctos_cinereus
ENSMMUG00000015558	PRPF6	98	93.761	ENSPFOG00000006431	prpf6	96	86.306	Poecilia_formosa
ENSMMUG00000015558	PRPF6	98	93.588	ENSPLAG00000005974	prpf6	96	86.200	Poecilia_latipinna
ENSMMUG00000015558	PRPF6	98	93.934	ENSPMEG00000009977	prpf6	96	86.412	Poecilia_mexicana
ENSMMUG00000015558	PRPF6	98	93.934	ENSPREG00000017993	prpf6	92	86.412	Poecilia_reticulata
ENSMMUG00000015558	PRPF6	98	98.787	ENSPPYG00000011256	PRPF6	100	92.675	Pongo_abelii
ENSMMUG00000015558	PRPF6	98	99.307	ENSPCAG00000006536	PRPF6	88	96.460	Procavia_capensis
ENSMMUG00000015558	PRPF6	98	99.133	ENSPCOG00000016881	PRPF6	100	90.977	Propithecus_coquereli
ENSMMUG00000015558	PRPF6	98	95.818	ENSPVAG00000014316	PRPF6	100	85.866	Pteropus_vampyrus
ENSMMUG00000015558	PRPF6	100	79.487	ENSPNYG00000001939	prpf6	96	76.417	Pundamilia_nyererei
ENSMMUG00000015558	PRPF6	95	94.831	ENSPNAG00000015606	prpf6	96	86.730	Pygocentrus_nattereri
ENSMMUG00000015558	PRPF6	98	99.653	ENSRNOG00000051498	Prpf6	100	91.614	Rattus_norvegicus
ENSMMUG00000015558	PRPF6	98	99.653	ENSRBIG00000043613	PRPF6	98	97.924	Rhinopithecus_bieti
ENSMMUG00000015558	PRPF6	98	99.653	ENSRROG00000040969	PRPF6	98	97.924	Rhinopithecus_roxellana
ENSMMUG00000015558	PRPF6	98	94.801	ENSSBOG00000020632	PRPF6	93	94.801	Saimiri_boliviensis_boliviensis
ENSMMUG00000015558	PRPF6	98	99.480	ENSSHAG00000016810	PRPF6	100	91.083	Sarcophilus_harrisii
ENSMMUG00000015558	PRPF6	98	95.494	ENSSFOG00015020859	prpf6	92	96.187	Scleropages_formosus
ENSMMUG00000015558	PRPF6	98	92.721	ENSSMAG00000008112	prpf6	96	85.138	Scophthalmus_maximus
ENSMMUG00000015558	PRPF6	98	93.414	ENSSDUG00000016142	prpf6	96	86.093	Seriola_dumerili
ENSMMUG00000015558	PRPF6	98	93.414	ENSSLDG00000025283	prpf6	100	87.514	Seriola_lalandi_dorsalis
ENSMMUG00000015558	PRPF6	98	98.440	ENSSPUG00000018260	PRPF6	97	98.440	Sphenodon_punctatus
ENSMMUG00000015558	PRPF6	98	93.588	ENSSPAG00000015850	prpf6	96	86.093	Stegastes_partitus
ENSMMUG00000015558	PRPF6	98	99.307	ENSSSCG00000029119	PRPF6	97	99.307	Sus_scrofa
ENSMMUG00000015558	PRPF6	98	98.960	ENSTGUG00000007221	PRPF6	99	90.658	Taeniopygia_guttata
ENSMMUG00000015558	PRPF6	95	93.761	ENSTRUG00000002920	prpf6	96	85.138	Takifugu_rubripes
ENSMMUG00000015558	PRPF6	100	78.458	ENSTNIG00000017873	prpf6	100	78.881	Tetraodon_nigroviridis
ENSMMUG00000015558	PRPF6	87	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSMMUG00000015558	PRPF6	98	98.960	ENSTTRG00000013068	PRPF6	100	90.234	Tursiops_truncatus
ENSMMUG00000015558	PRPF6	98	99.307	ENSUMAG00000021631	PRPF6	94	99.307	Ursus_maritimus
ENSMMUG00000015558	PRPF6	98	99.307	ENSVVUG00000014948	PRPF6	100	91.083	Vulpes_vulpes
ENSMMUG00000015558	PRPF6	98	96.187	ENSXETG00000012054	prpf6	97	89.172	Xenopus_tropicalis
ENSMMUG00000015558	PRPF6	98	93.934	ENSXCOG00000008082	prpf6	96	86.412	Xiphophorus_couchianus
ENSMMUG00000015558	PRPF6	98	93.934	ENSXMAG00000015581	prpf6	96	86.412	Xiphophorus_maculatus